RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 NPM1P06748 294 aaKnown RBP eCLIP29.96■■■□□ 2.39
TMEM50B-205ENST00000459909 BIVM-ERCC5R4GMW8 1640 aa29.96■■■□□ 2.39
TMEM50B-205ENST00000459909 MAPKBP1O60336 1514 aa29.91■■■□□ 2.38
TMEM50B-205ENST00000459909 DIP2BQ9P265 1576 aa29.85■■■□□ 2.37
TMEM50B-205ENST00000459909 KDM4FA0A1W2PPD8 638 aa29.83■■■□□ 2.37
TMEM50B-205ENST00000459909 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
TMEM50B-205ENST00000459909 SUPT5HO00267 1087 aaKnown RBP29.77■■■□□ 2.36
TMEM50B-205ENST00000459909 KDM6BO15054 1643 aa29.77■■■□□ 2.36
TMEM50B-205ENST00000459909 ADCY10Q96PN6 1610 aa29.77■■■□□ 2.36
TMEM50B-205ENST00000459909 KIAA0586Q9BVV6 1533 aa29.65■■■□□ 2.34
TMEM50B-205ENST00000459909 ILDR1Q86SU0 546 aaPredicted RBP29.64■■■□□ 2.34
TMEM50B-205ENST00000459909 TSPOAP1O95153 1857 aa29.57■■■□□ 2.32
TMEM50B-205ENST00000459909 PTPRGP23470 1445 aa29.52■■■□□ 2.32
TMEM50B-205ENST00000459909 IGF1RP08069 1367 aa29.52■■■□□ 2.32
TMEM50B-205ENST00000459909 ABCC2Q92887 1545 aa29.45■■■□□ 2.3
TMEM50B-205ENST00000459909 KIF27Q86VH2 1401 aa29.43■■■□□ 2.3
TMEM50B-205ENST00000459909 CUL7Q14999 1698 aa29.43■■■□□ 2.3
TMEM50B-205ENST00000459909 PLB1Q6P1J6 1458 aa29.42■■■□□ 2.3
TMEM50B-205ENST00000459909 TNIKQ9UKE5 1360 aa29.41■■■□□ 2.3
TMEM50B-205ENST00000459909 GLI2P10070 1586 aa29.41■■■□□ 2.3
TMEM50B-205ENST00000459909 ASXL2Q76L83 1435 aa29.41■■■□□ 2.3
TMEM50B-205ENST00000459909 ADGRL1O94910 1474 aa29.41■■■□□ 2.3
TMEM50B-205ENST00000459909 TTBK1Q5TCY1 1321 aaPredicted RBP29.4■■■□□ 2.3
TMEM50B-205ENST00000459909 CARMIL2Q6F5E8 1435 aa29.39■■■□□ 2.3
TMEM50B-205ENST00000459909 PPRC1Q5VV67 1664 aaKnown RBP29.34■■■□□ 2.29
TMEM50B-205ENST00000459909 UHRF1BP1LA0JNW5 1464 aa29.32■■■□□ 2.28
TMEM50B-205ENST00000459909 CARMIL1Q5VZK9 1371 aa29.3■■■□□ 2.28
TMEM50B-205ENST00000459909 COL17A1Q9UMD9 1497 aaPredicted RBP29.28■■■□□ 2.28
TMEM50B-205ENST00000459909 UACAQ9BZF9 1416 aa29.27■■■□□ 2.28
TMEM50B-205ENST00000459909 EPRSP07814 1512 aaKnown RBP29.23■■■□□ 2.27
TMEM50B-205ENST00000459909 TEX14Q8IWB6 1497 aa29.22■■■□□ 2.27
TMEM50B-205ENST00000459909 IQGAP2Q13576 1575 aa29.22■■■□□ 2.27
TMEM50B-205ENST00000459909 HECW2Q9P2P5 1572 aa29.21■■■□□ 2.27
TMEM50B-205ENST00000459909 KDM5BQ9UGL1 1544 aa29.19■■■□□ 2.26
TMEM50B-205ENST00000459909 MAP3K4Q9Y6R4 1608 aa29.18■■■□□ 2.26
TMEM50B-205ENST00000459909 DISP1Q96F81 1524 aa29.15■■■□□ 2.26
TMEM50B-205ENST00000459909 ZCCHC11Q5TAX3 1644 aaKnown RBP29.05■■■□□ 2.24
TMEM50B-205ENST00000459909 UGGT2Q9NYU1 1516 aa29.03■■■□□ 2.24
TMEM50B-205ENST00000459909 WDR7Q9Y4E6 1490 aa29.01■■■□□ 2.23
TMEM50B-205ENST00000459909 KIAA0556O60303 1618 aa28.96■■■□□ 2.23
TMEM50B-205ENST00000459909 RAPGEF2Q9Y4G8 1499 aa28.94■■■□□ 2.22
TMEM50B-205ENST00000459909 MAGI3Q5TCQ9 1506 aa28.93■■■□□ 2.22
TMEM50B-205ENST00000459909 CD109Q6YHK3 1445 aa28.93■■■□□ 2.22
TMEM50B-205ENST00000459909 FBXO41Q8TF61 875 aa28.87■■■□□ 2.21
TMEM50B-205ENST00000459909 CFAP43Q8NDM7 1665 aa28.84■■■□□ 2.21
TMEM50B-205ENST00000459909 KCNH8Q96L42 1107 aa28.84■■■□□ 2.21
TMEM50B-205ENST00000459909 GOLGA3Q08378 1498 aa28.76■■■□□ 2.19
TMEM50B-205ENST00000459909 ABCA8O94911 1581 aa28.75■■■□□ 2.19
TMEM50B-205ENST00000459909 KIF21BO75037 1637 aa28.75■■■□□ 2.19
TMEM50B-205ENST00000459909 ARAP3Q8WWN8 1544 aa28.73■■■□□ 2.19
TMEM50B-205ENST00000459909 PTPRMP28827 1452 aa28.66■■■□□ 2.18
TMEM50B-205ENST00000459909 CTTNBP2Q8WZ74 1663 aa28.64■■■□□ 2.17
TMEM50B-205ENST00000459909 PHLDB1Q86UU1 1377 aa28.63■■■□□ 2.17
TMEM50B-205ENST00000459909 ADAMTSL3P82987 1691 aa28.6■■■□□ 2.17
TMEM50B-205ENST00000459909 FAM9AQ8IZU1 332 aaPredicted RBP28.57■■■□□ 2.16
TMEM50B-205ENST00000459909 ATP10BO94823 1461 aa28.53■■■□□ 2.16
TMEM50B-205ENST00000459909 RAPGEF3O95398 923 aa28.53■■■□□ 2.16
TMEM50B-205ENST00000459909 ARID3CA6NKF2 412 aa28.52■■■□□ 2.16
TMEM50B-205ENST00000459909 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
TMEM50B-205ENST00000459909 PCF11O94913 1555 aaKnown RBP28.5■■■□□ 2.15
TMEM50B-205ENST00000459909 NEO1Q92859 1461 aa28.49■■■□□ 2.15
TMEM50B-205ENST00000459909 PRXQ9BXM0 1461 aa28.46■■■□□ 2.15
TMEM50B-205ENST00000459909 ARID4BQ4LE39 1312 aaPredicted RBP28.46■■■□□ 2.15
TMEM50B-205ENST00000459909 LMTK3Q96Q04 1460 aa28.46■■■□□ 2.15
TMEM50B-205ENST00000459909 BCORL1Q5H9F3 1711 aa28.45■■■□□ 2.14
TMEM50B-205ENST00000459909 MADDQ8WXG6 1647 aa28.42■■■□□ 2.14
TMEM50B-205ENST00000459909 P3H3Q8IVL6 736 aa28.41■■■□□ 2.14
TMEM50B-205ENST00000459909 FRMPD1Q5SYB0 1578 aa28.38■■■□□ 2.13
TMEM50B-205ENST00000459909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.33■■■□□ 2.13
TMEM50B-205ENST00000459909 HNRNPUL2Q1KMD3 747 aaKnown RBP28.33■■■□□ 2.13
TMEM50B-205ENST00000459909 ARHGEF40Q8TER5 1519 aa28.3■■■□□ 2.12
TMEM50B-205ENST00000459909 RAPGEF6Q8TEU7 1601 aa28.29■■■□□ 2.12
TMEM50B-205ENST00000459909 DENND4BO75064 1496 aaPredicted RBP28.28■■■□□ 2.12
TMEM50B-205ENST00000459909 HSPA2P54652 639 aa28.28■■■□□ 2.12
TMEM50B-205ENST00000459909 RIMS1Q86UR5 1692 aaKnown RBP28.27■■■□□ 2.12
TMEM50B-205ENST00000459909 SAMD9Q5K651 1589 aa28.25■■■□□ 2.11
TMEM50B-205ENST00000459909 POGZQ7Z3K3 1410 aa28.25■■■□□ 2.11
TMEM50B-205ENST00000459909 FHOD3Q2V2M9 1422 aa28.24■■■□□ 2.11
TMEM50B-205ENST00000459909 CERKQ8TCT0 537 aa28.23■■■□□ 2.11
TMEM50B-205ENST00000459909 AKNAQ7Z591 1439 aa28.22■■■□□ 2.11
TMEM50B-205ENST00000459909 NUP153P49790 1475 aaKnown RBP28.21■■■□□ 2.11
TMEM50B-205ENST00000459909 FANCAO15360 1455 aa28.21■■■□□ 2.11
TMEM50B-205ENST00000459909 PLPPR3Q6T4P5 718 aa28.19■■■□□ 2.1
TMEM50B-205ENST00000459909 RICTORQ6R327 1708 aa28.18■■■□□ 2.1
TMEM50B-205ENST00000459909 PLEKHD1A6NEE1 506 aa28.18■■■□□ 2.1
TMEM50B-205ENST00000459909 ZMYM4Q5VZL5 1548 aa28.14■■■□□ 2.1
TMEM50B-205ENST00000459909 CFAP74Q9C0B2 1584 aa28.14■■■□□ 2.1
TMEM50B-205ENST00000459909 MAGI2Q86UL8 1455 aa28.12■■■□□ 2.09
TMEM50B-205ENST00000459909 EFCAB5A4FU69 1503 aa28.12■■■□□ 2.09
TMEM50B-205ENST00000459909 ZFYVE16Q7Z3T8 1539 aa28.12■■■□□ 2.09
TMEM50B-205ENST00000459909 YEATS2Q9ULM3 1422 aa28.1■■■□□ 2.09
TMEM50B-205ENST00000459909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.08■■■□□ 2.09
TMEM50B-205ENST00000459909 CSRNP3Q8WYN3 585 aa28.08■■■□□ 2.09
TMEM50B-205ENST00000459909 MLECQ14165 292 aa28.07■■■□□ 2.08
TMEM50B-205ENST00000459909 SIGLEC1Q9BZZ2 1709 aa28.05■■■□□ 2.08
TMEM50B-205ENST00000459909 TTC37Q6PGP7 1564 aa28.04■■■□□ 2.08
TMEM50B-205ENST00000459909 RANGAP1P46060 587 aaPredicted RBP28.01■■■□□ 2.07
TMEM50B-205ENST00000459909 HECW1Q76N89 1606 aa28■■■□□ 2.07
TMEM50B-205ENST00000459909 DISP3Q9P2K9 1392 aa27.99■■■□□ 2.07
TMEM50B-205ENST00000459909 FER1L4A9Z1Z3 1794 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms