RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 IGF1RP08069 1367 aa37.7■■■■□ 3.63
TMEM56-203ENST00000456991 RUSC2Q8N2Y8 1516 aa37.68■■■■□ 3.62
TMEM56-203ENST00000456991 KIF27Q86VH2 1401 aa37.66■■■■□ 3.62
TMEM56-203ENST00000456991 KIAA0586Q9BVV6 1533 aa37.61■■■■□ 3.61
TMEM56-203ENST00000456991 FAM69CQ0P6D2 419 aa37.6■■■■□ 3.61
TMEM56-203ENST00000456991 ABCC10Q5T3U5 1492 aa37.52■■■■□ 3.6
TMEM56-203ENST00000456991 KIF13AQ9H1H9 1805 aa37.5■■■■□ 3.59
TMEM56-203ENST00000456991 MAPKBP1O60336 1514 aa37.47■■■■□ 3.59
TMEM56-203ENST00000456991 CUL7Q14999 1698 aa37.47■■■■□ 3.59
TMEM56-203ENST00000456991 CARMIL1Q5VZK9 1371 aa37.44■■■■□ 3.58
TMEM56-203ENST00000456991 ADCY10Q96PN6 1610 aa37.42■■■■□ 3.58
TMEM56-203ENST00000456991 PTPRGP23470 1445 aa37.37■■■■□ 3.57
TMEM56-203ENST00000456991 DIP2BQ9P265 1576 aa37.31■■■■□ 3.56
TMEM56-203ENST00000456991 TTBK1Q5TCY1 1321 aaPredicted RBP37.3■■■■□ 3.56
TMEM56-203ENST00000456991 CARMIL2Q6F5E8 1435 aa37.29■■■■□ 3.56
TMEM56-203ENST00000456991 TNIKQ9UKE5 1360 aa37.26■■■■□ 3.55
TMEM56-203ENST00000456991 IQGAP2Q13576 1575 aa37.12■■■■□ 3.53
TMEM56-203ENST00000456991 ABCC2Q92887 1545 aa37.12■■■■□ 3.53
TMEM56-203ENST00000456991 KDM6BO15054 1643 aa37.07■■■■□ 3.53
TMEM56-203ENST00000456991 PLB1Q6P1J6 1458 aa37.05■■■■□ 3.52
TMEM56-203ENST00000456991 ASXL2Q76L83 1435 aa37.04■■■■□ 3.52
TMEM56-203ENST00000456991 UACAQ9BZF9 1416 aa37.04■■■■□ 3.52
TMEM56-203ENST00000456991 UHRF1BP1LA0JNW5 1464 aa37.04■■■■□ 3.52
TMEM56-203ENST00000456991 RAPGEF2Q9Y4G8 1499 aa37.02■■■■□ 3.52
TMEM56-203ENST00000456991 DISP1Q96F81 1524 aa37■■■■□ 3.51
TMEM56-203ENST00000456991 TSPOAP1O95153 1857 aa36.97■■■■□ 3.51
TMEM56-203ENST00000456991 KDM4FA0A1W2PPD8 638 aa36.97■■■■□ 3.51
TMEM56-203ENST00000456991 UGGT2Q9NYU1 1516 aa36.92■■■■□ 3.5
TMEM56-203ENST00000456991 GLI2P10070 1586 aa36.91■■■■□ 3.5
TMEM56-203ENST00000456991 KDM5BQ9UGL1 1544 aa36.85■■■■□ 3.49
TMEM56-203ENST00000456991 EPRSP07814 1512 aaKnown RBP36.8■■■■□ 3.48
TMEM56-203ENST00000456991 KIAA0556O60303 1618 aa36.76■■■■□ 3.48
TMEM56-203ENST00000456991 PPRC1Q5VV67 1664 aaKnown RBP36.72■■■■□ 3.47
TMEM56-203ENST00000456991 TEX14Q8IWB6 1497 aa36.68■■■■□ 3.46
TMEM56-203ENST00000456991 ZCCHC11Q5TAX3 1644 aaKnown RBP36.67■■■■□ 3.46
TMEM56-203ENST00000456991 COL17A1Q9UMD9 1497 aaPredicted RBP36.66■■■■□ 3.46
TMEM56-203ENST00000456991 GOLGA3Q08378 1498 aa36.65■■■■□ 3.46
TMEM56-203ENST00000456991 MAP3K4Q9Y6R4 1608 aa36.63■■■■□ 3.45
TMEM56-203ENST00000456991 WDR7Q9Y4E6 1490 aa36.62■■■■□ 3.45
TMEM56-203ENST00000456991 PRXQ9BXM0 1461 aa36.57■■■■□ 3.45
TMEM56-203ENST00000456991 KCNH8Q96L42 1107 aa36.54■■■■□ 3.44
TMEM56-203ENST00000456991 ADGRL1O94910 1474 aa36.52■■■■□ 3.44
TMEM56-203ENST00000456991 FAM9AQ8IZU1 332 aaPredicted RBP36.52■■■■□ 3.44
TMEM56-203ENST00000456991 CTTNBP2Q8WZ74 1663 aa36.51■■■■□ 3.44
TMEM56-203ENST00000456991 CD109Q6YHK3 1445 aa36.49■■■■□ 3.43
TMEM56-203ENST00000456991 ABCA8O94911 1581 aa36.49■■■■□ 3.43
TMEM56-203ENST00000456991 MAGI3Q5TCQ9 1506 aa36.42■■■■□ 3.42
TMEM56-203ENST00000456991 P3H3Q8IVL6 736 aa36.38■■■■□ 3.41
TMEM56-203ENST00000456991 CSRNP3Q8WYN3 585 aa36.34■■■■□ 3.41
TMEM56-203ENST00000456991 ARID3CA6NKF2 412 aa36.32■■■■□ 3.4
TMEM56-203ENST00000456991 CFAP43Q8NDM7 1665 aa36.3■■■■□ 3.4
TMEM56-203ENST00000456991 ATP10BO94823 1461 aa36.26■■■■□ 3.4
TMEM56-203ENST00000456991 ARAP3Q8WWN8 1544 aa36.14■■■■□ 3.38
TMEM56-203ENST00000456991 PHLDB1Q86UU1 1377 aa36.14■■■■□ 3.38
TMEM56-203ENST00000456991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.12■■■■□ 3.37
TMEM56-203ENST00000456991 HNRNPUL2Q1KMD3 747 aaKnown RBP36.12■■■■□ 3.37
TMEM56-203ENST00000456991 ILDR1Q86SU0 546 aaPredicted RBP36.1■■■■□ 3.37
TMEM56-203ENST00000456991 SAMD9Q5K651 1589 aa36.08■■■■□ 3.37
TMEM56-203ENST00000456991 EEA1Q15075 1411 aa36.07■■■■□ 3.36
TMEM56-203ENST00000456991 RANGAP1P46060 587 aaPredicted RBP36.05■■■■□ 3.36
TMEM56-203ENST00000456991 HECW2Q9P2P5 1572 aa36.04■■■■□ 3.36
TMEM56-203ENST00000456991 ABCA9Q8IUA7 1624 aa36.01■■■■□ 3.36
TMEM56-203ENST00000456991 RAPGEF6Q8TEU7 1601 aa36.01■■■■□ 3.35
TMEM56-203ENST00000456991 RAPGEF3O95398 923 aa36■■■■□ 3.35
TMEM56-203ENST00000456991 NEO1Q92859 1461 aa35.96■■■■□ 3.35
TMEM56-203ENST00000456991 NUP153P49790 1475 aaKnown RBP35.95■■■■□ 3.35
TMEM56-203ENST00000456991 PLEKHD1A6NEE1 506 aa35.94■■■■□ 3.34
TMEM56-203ENST00000456991 KIF21BO75037 1637 aa35.93■■■■□ 3.34
TMEM56-203ENST00000456991 FHOD3Q2V2M9 1422 aa35.92■■■■□ 3.34
TMEM56-203ENST00000456991 ARID4BQ4LE39 1312 aaPredicted RBP35.81■■■■□ 3.32
TMEM56-203ENST00000456991 PTPRMP28827 1452 aa35.76■■■■□ 3.32
TMEM56-203ENST00000456991 EFCAB5A4FU69 1503 aa35.73■■■■□ 3.31
TMEM56-203ENST00000456991 DENND4BO75064 1496 aaPredicted RBP35.73■■■■□ 3.31
TMEM56-203ENST00000456991 AKNAQ7Z591 1439 aa35.72■■■■□ 3.31
TMEM56-203ENST00000456991 ADAMTSL3P82987 1691 aa35.71■■■■□ 3.31
TMEM56-203ENST00000456991 FRMPD1Q5SYB0 1578 aa35.7■■■■□ 3.31
TMEM56-203ENST00000456991 FANCAO15360 1455 aa35.68■■■■□ 3.3
TMEM56-203ENST00000456991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.64■■■■□ 3.32e-6■■■■□ 21.5
TMEM56-203ENST00000456991 UBTFP17480 764 aaKnown RBP35.63■■■■□ 3.29
TMEM56-203ENST00000456991 BCORL1Q5H9F3 1711 aa35.59■■■■□ 3.29
TMEM56-203ENST00000456991 CFAP74Q9C0B2 1584 aa35.57■■■■□ 3.28
TMEM56-203ENST00000456991 EHMT2Q96KQ7 1210 aa35.57■■■■□ 3.28
TMEM56-203ENST00000456991 ATP1B4Q9UN42 357 aaPredicted RBP35.57■■■■□ 3.28
TMEM56-203ENST00000456991 ARHGEF40Q8TER5 1519 aa35.56■■■■□ 3.28
TMEM56-203ENST00000456991 CDK13Q14004 1512 aaKnown RBP35.53■■■■□ 3.28
TMEM56-203ENST00000456991 MADDQ8WXG6 1647 aa35.53■■■■□ 3.28
TMEM56-203ENST00000456991 TTC37Q6PGP7 1564 aa35.52■■■■□ 3.28
TMEM56-203ENST00000456991 RICTORQ6R327 1708 aa35.52■■■■□ 3.28
TMEM56-203ENST00000456991 PLCH2O75038 1416 aa35.51■■■■□ 3.28
TMEM56-203ENST00000456991 FMN1Q68DA7 1419 aa35.51■■■■□ 3.28
TMEM56-203ENST00000456991 POGZQ7Z3K3 1410 aa35.51■■■■□ 3.28
TMEM56-203ENST00000456991 CDK11AQ9UQ88 783 aaPredicted RBP35.51■■■■□ 3.28
TMEM56-203ENST00000456991 MAGI2Q86UL8 1455 aa35.48■■■■□ 3.27
TMEM56-203ENST00000456991 SCAPERQ9BY12 1400 aa35.47■■■■□ 3.27
TMEM56-203ENST00000456991 ZMYM4Q5VZL5 1548 aa35.47■■■■□ 3.27
TMEM56-203ENST00000456991 FBXO41Q8TF61 875 aa35.46■■■■□ 3.27
TMEM56-203ENST00000456991 YEATS2Q9ULM3 1422 aa35.46■■■■□ 3.27
TMEM56-203ENST00000456991 EFCAB2Q5VUJ9 269 aa35.45■■■■□ 3.27
TMEM56-203ENST00000456991 PCF11O94913 1555 aaKnown RBP35.44■■■■□ 3.26
TMEM56-203ENST00000456991 ZFYVE16Q7Z3T8 1539 aa35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms