RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 FAM69CQ0P6D2 419 aa23.82■■□□□ 1.4
SNHG17-208ENST00000456953 MAPKBP1O60336 1514 aa23.79■■□□□ 1.4
SNHG17-208ENST00000456953 NPM1P06748 294 aaKnown RBP eCLIP23.79■■□□□ 1.4
SNHG17-208ENST00000456953 RUSC2Q8N2Y8 1516 aa23.76■■□□□ 1.39
SNHG17-208ENST00000456953 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
SNHG17-208ENST00000456953 SUPT5HO00267 1087 aaKnown RBP23.71■■□□□ 1.39
SNHG17-208ENST00000456953 ADCY10Q96PN6 1610 aa23.7■■□□□ 1.39
SNHG17-208ENST00000456953 KDM6BO15054 1643 aa23.68■■□□□ 1.38
SNHG17-208ENST00000456953 KDM4FA0A1W2PPD8 638 aa23.65■■□□□ 1.38
SNHG17-208ENST00000456953 KIAA0586Q9BVV6 1533 aa23.59■■□□□ 1.37
SNHG17-208ENST00000456953 TSPOAP1O95153 1857 aa23.57■■□□□ 1.36
SNHG17-208ENST00000456953 IGF1RP08069 1367 aa23.49■■□□□ 1.35
SNHG17-208ENST00000456953 CUL7Q14999 1698 aa23.48■■□□□ 1.35
SNHG17-208ENST00000456953 PTPRGP23470 1445 aa23.47■■□□□ 1.35
SNHG17-208ENST00000456953 ILDR1Q86SU0 546 aaPredicted RBP23.46■■□□□ 1.35
SNHG17-208ENST00000456953 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
SNHG17-208ENST00000456953 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
SNHG17-208ENST00000456953 PLB1Q6P1J6 1458 aa23.4■■□□□ 1.34
SNHG17-208ENST00000456953 GLI2P10070 1586 aa23.4■■□□□ 1.34
SNHG17-208ENST00000456953 CARMIL2Q6F5E8 1435 aa23.39■■□□□ 1.33
SNHG17-208ENST00000456953 ASXL2Q76L83 1435 aa23.39■■□□□ 1.33
SNHG17-208ENST00000456953 TNIKQ9UKE5 1360 aa23.39■■□□□ 1.33
SNHG17-208ENST00000456953 PPRC1Q5VV67 1664 aaKnown RBP23.37■■□□□ 1.33
SNHG17-208ENST00000456953 ADGRL1O94910 1474 aa23.36■■□□□ 1.33
SNHG17-208ENST00000456953 TTBK1Q5TCY1 1321 aaPredicted RBP23.35■■□□□ 1.33
SNHG17-208ENST00000456953 UHRF1BP1LA0JNW5 1464 aa23.33■■□□□ 1.33
SNHG17-208ENST00000456953 CARMIL1Q5VZK9 1371 aa23.31■■□□□ 1.32
SNHG17-208ENST00000456953 IQGAP2Q13576 1575 aa23.29■■□□□ 1.32
SNHG17-208ENST00000456953 UACAQ9BZF9 1416 aa23.27■■□□□ 1.32
SNHG17-208ENST00000456953 COL17A1Q9UMD9 1497 aaPredicted RBP23.26■■□□□ 1.31
SNHG17-208ENST00000456953 EPRSP07814 1512 aaKnown RBP23.24■■□□□ 1.31
SNHG17-208ENST00000456953 MAP3K4Q9Y6R4 1608 aa23.24■■□□□ 1.31
SNHG17-208ENST00000456953 TEX14Q8IWB6 1497 aa23.24■■□□□ 1.31
SNHG17-208ENST00000456953 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
SNHG17-208ENST00000456953 DISP1Q96F81 1524 aa23.22■■□□□ 1.31
SNHG17-208ENST00000456953 HECW2Q9P2P5 1572 aa23.21■■□□□ 1.31
SNHG17-208ENST00000456953 ZCCHC11Q5TAX3 1644 aaKnown RBP23.15■■□□□ 1.3
SNHG17-208ENST00000456953 UGGT2Q9NYU1 1516 aa23.13■■□□□ 1.29
SNHG17-208ENST00000456953 WDR7Q9Y4E6 1490 aa23.08■■□□□ 1.29
SNHG17-208ENST00000456953 KIAA0556O60303 1618 aa23.07■■□□□ 1.28
SNHG17-208ENST00000456953 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
SNHG17-208ENST00000456953 MAGI3Q5TCQ9 1506 aa23.01■■□□□ 1.27
SNHG17-208ENST00000456953 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
SNHG17-208ENST00000456953 CFAP43Q8NDM7 1665 aa22.98■■□□□ 1.27
SNHG17-208ENST00000456953 KCNH8Q96L42 1107 aa22.91■■□□□ 1.26
SNHG17-208ENST00000456953 GOLGA3Q08378 1498 aa22.91■■□□□ 1.26
SNHG17-208ENST00000456953 ABCA8O94911 1581 aa22.9■■□□□ 1.26
SNHG17-208ENST00000456953 KIF21BO75037 1637 aa22.89■■□□□ 1.25
SNHG17-208ENST00000456953 CTTNBP2Q8WZ74 1663 aa22.87■■□□□ 1.25
SNHG17-208ENST00000456953 FBXO41Q8TF61 875 aa22.87■■□□□ 1.25
SNHG17-208ENST00000456953 ARAP3Q8WWN8 1544 aa22.86■■□□□ 1.25
SNHG17-208ENST00000456953 PTPRMP28827 1452 aa22.77■■□□□ 1.24
SNHG17-208ENST00000456953 PHLDB1Q86UU1 1377 aa22.76■■□□□ 1.23
SNHG17-208ENST00000456953 ADAMTSL3P82987 1691 aa22.75■■□□□ 1.23
SNHG17-208ENST00000456953 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
SNHG17-208ENST00000456953 ABCA9Q8IUA7 1624 aa22.71■■□□□ 1.23
SNHG17-208ENST00000456953 ATP10BO94823 1461 aa22.71■■□□□ 1.23
SNHG17-208ENST00000456953 PRXQ9BXM0 1461 aa22.68■■□□□ 1.22
SNHG17-208ENST00000456953 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
SNHG17-208ENST00000456953 RAPGEF3O95398 923 aa22.67■■□□□ 1.22
SNHG17-208ENST00000456953 NEO1Q92859 1461 aa22.66■■□□□ 1.22
SNHG17-208ENST00000456953 PCF11O94913 1555 aaKnown RBP22.66■■□□□ 1.22
SNHG17-208ENST00000456953 BCORL1Q5H9F3 1711 aa22.65■■□□□ 1.22
SNHG17-208ENST00000456953 LMTK3Q96Q04 1460 aa22.61■■□□□ 1.21
SNHG17-208ENST00000456953 MADDQ8WXG6 1647 aa22.61■■□□□ 1.21
SNHG17-208ENST00000456953 ARID4BQ4LE39 1312 aaPredicted RBP22.6■■□□□ 1.21
SNHG17-208ENST00000456953 FRMPD1Q5SYB0 1578 aa22.6■■□□□ 1.21
SNHG17-208ENST00000456953 P3H3Q8IVL6 736 aa22.59■■□□□ 1.21
SNHG17-208ENST00000456953 RAPGEF6Q8TEU7 1601 aa22.55■■□□□ 1.2
SNHG17-208ENST00000456953 ARHGEF40Q8TER5 1519 aa22.54■■□□□ 1.2
SNHG17-208ENST00000456953 SAMD9Q5K651 1589 aa22.53■■□□□ 1.2
SNHG17-208ENST00000456953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.51■■□□□ 1.19
SNHG17-208ENST00000456953 HNRNPUL2Q1KMD3 747 aaKnown RBP22.51■■□□□ 1.19
SNHG17-208ENST00000456953 RIMS1Q86UR5 1692 aaKnown RBP22.51■■□□□ 1.19
SNHG17-208ENST00000456953 DENND4BO75064 1496 aaPredicted RBP22.48■■□□□ 1.19
SNHG17-208ENST00000456953 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
SNHG17-208ENST00000456953 RICTORQ6R327 1708 aa22.47■■□□□ 1.19
SNHG17-208ENST00000456953 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
SNHG17-208ENST00000456953 POGZQ7Z3K3 1410 aa22.46■■□□□ 1.19
SNHG17-208ENST00000456953 HSPA2P54652 639 aa22.44■■□□□ 1.18
SNHG17-208ENST00000456953 AKNAQ7Z591 1439 aa22.44■■□□□ 1.18
SNHG17-208ENST00000456953 CFAP74Q9C0B2 1584 aa22.43■■□□□ 1.18
SNHG17-208ENST00000456953 FANCAO15360 1455 aa22.43■■□□□ 1.18
SNHG17-208ENST00000456953 ZMYM4Q5VZL5 1548 aa22.41■■□□□ 1.18
SNHG17-208ENST00000456953 PLEKHD1A6NEE1 506 aa22.4■■□□□ 1.18
SNHG17-208ENST00000456953 CERKQ8TCT0 537 aa22.39■■□□□ 1.17
SNHG17-208ENST00000456953 EFCAB5A4FU69 1503 aa22.38■■□□□ 1.17
SNHG17-208ENST00000456953 ZFYVE16Q7Z3T8 1539 aa22.38■■□□□ 1.17
SNHG17-208ENST00000456953 MAGI2Q86UL8 1455 aa22.37■■□□□ 1.17
SNHG17-208ENST00000456953 PLPPR3Q6T4P5 718 aa22.36■■□□□ 1.17
SNHG17-208ENST00000456953 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
SNHG17-208ENST00000456953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.36■■□□□ 1.178e-6■□□□□ 8.1
SNHG17-208ENST00000456953 SIGLEC1Q9BZZ2 1709 aa22.34■■□□□ 1.17
SNHG17-208ENST00000456953 YEATS2Q9ULM3 1422 aa22.34■■□□□ 1.17
SNHG17-208ENST00000456953 TTC37Q6PGP7 1564 aa22.33■■□□□ 1.16
SNHG17-208ENST00000456953 FER1L4A9Z1Z3 1794 aa22.31■■□□□ 1.16
SNHG17-208ENST00000456953 HECW1Q76N89 1606 aa22.29■■□□□ 1.16
SNHG17-208ENST00000456953 RANGAP1P46060 587 aaPredicted RBP22.28■■□□□ 1.16
SNHG17-208ENST00000456953 MLECQ14165 292 aa22.28■■□□□ 1.16
SNHG17-208ENST00000456953 ARHGEF12Q9NZN5 1544 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms