RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
LSMEM1-203ENST00000455302 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
LSMEM1-203ENST00000455302 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
LSMEM1-203ENST00000455302 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
LSMEM1-203ENST00000455302 NESP48681 1621 aa13.28□□□□□ -0.28
LSMEM1-203ENST00000455302 RGL2O15211 777 aa13.27□□□□□ -0.29
LSMEM1-203ENST00000455302 ATAD2BQ9ULI0 1458 aa13.26□□□□□ -0.29
LSMEM1-203ENST00000455302 PAXIP1Q6ZW49 1069 aaPredicted RBP13.24□□□□□ -0.29
LSMEM1-203ENST00000455302 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
LSMEM1-203ENST00000455302 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
LSMEM1-203ENST00000455302 BCANQ96GW7 911 aa13.23□□□□□ -0.29
LSMEM1-203ENST00000455302 CFAP44Q96MT7 982 aa13.21□□□□□ -0.29
LSMEM1-203ENST00000455302 GSE1Q14687 1217 aa13.2□□□□□ -0.3
LSMEM1-203ENST00000455302 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
LSMEM1-203ENST00000455302 HMGXB3Q12766 1538 aa13.19□□□□□ -0.3
LSMEM1-203ENST00000455302 SPRYD3Q8NCJ5 442 aa13.19□□□□□ -0.3
LSMEM1-203ENST00000455302 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
LSMEM1-203ENST00000455302 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
LSMEM1-203ENST00000455302 CHGAP10645 457 aaKnown RBP13.15□□□□□ -0.3
LSMEM1-203ENST00000455302 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
LSMEM1-203ENST00000455302 TAOK2Q9UL54 1235 aa13.13□□□□□ -0.31
LSMEM1-203ENST00000455302 POTEHQ6S545 545 aa13.11□□□□□ -0.31
LSMEM1-203ENST00000455302 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
LSMEM1-203ENST00000455302 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
LSMEM1-203ENST00000455302 LAMC3Q9Y6N6 1575 aa13.09□□□□□ -0.31
LSMEM1-203ENST00000455302 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
LSMEM1-203ENST00000455302 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
LSMEM1-203ENST00000455302 DCAF8Q5TAQ9 597 aa13.06□□□□□ -0.32
LSMEM1-203ENST00000455302 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
LSMEM1-203ENST00000455302 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
LSMEM1-203ENST00000455302 NUBP1P53384 320 aa13.05□□□□□ -0.32
LSMEM1-203ENST00000455302 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
LSMEM1-203ENST00000455302 KDM2AQ9Y2K7 1162 aa13.03□□□□□ -0.32
LSMEM1-203ENST00000455302 FAM212AQ96EL1 285 aa13.02□□□□□ -0.33
LSMEM1-203ENST00000455302 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.33
LSMEM1-203ENST00000455302 BAZ1AQ9NRL2 1556 aaPredicted RBP13.01□□□□□ -0.33
LSMEM1-203ENST00000455302 MRC2Q9UBG0 1479 aa12.98□□□□□ -0.33
LSMEM1-203ENST00000455302 RIOK3O14730 519 aaKnown RBP12.97□□□□□ -0.33
LSMEM1-203ENST00000455302 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
LSMEM1-203ENST00000455302 CREBZFQ9NS37 354 aa12.97□□□□□ -0.33
LSMEM1-203ENST00000455302 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
LSMEM1-203ENST00000455302 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
LSMEM1-203ENST00000455302 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
LSMEM1-203ENST00000455302 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
LSMEM1-203ENST00000455302 WDR62O43379 1518 aa12.93□□□□□ -0.34
LSMEM1-203ENST00000455302 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
LSMEM1-203ENST00000455302 VGFO15240 615 aaPredicted RBP12.9□□□□□ -0.34
LSMEM1-203ENST00000455302 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
LSMEM1-203ENST00000455302 MROH2BQ7Z745 1585 aa12.88□□□□□ -0.35
LSMEM1-203ENST00000455302 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
LSMEM1-203ENST00000455302 STK25O00506 426 aa12.84□□□□□ -0.35
LSMEM1-203ENST00000455302 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
LSMEM1-203ENST00000455302 RYDENQ9NUL5 291 aaKnown RBP12.83□□□□□ -0.36
LSMEM1-203ENST00000455302 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
LSMEM1-203ENST00000455302 RASEFQ8IZ41 740 aa12.82□□□□□ -0.36
LSMEM1-203ENST00000455302 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
LSMEM1-203ENST00000455302 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
LSMEM1-203ENST00000455302 GTPBP6O43824 516 aaPredicted RBP12.76□□□□□ -0.37
LSMEM1-203ENST00000455302 PRKCSHP14314 528 aaPredicted RBP12.76□□□□□ -0.37
LSMEM1-203ENST00000455302 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
LSMEM1-203ENST00000455302 RIMBP3CA6NJZ7 1639 aa12.76□□□□□ -0.37
LSMEM1-203ENST00000455302 RIMBP3BA6NNM3 1639 aa12.76□□□□□ -0.37
LSMEM1-203ENST00000455302 RIMBP3Q9UFD9 1639 aa12.76□□□□□ -0.37
LSMEM1-203ENST00000455302 NBR1Q14596 966 aa12.75□□□□□ -0.37
LSMEM1-203ENST00000455302 STK24Q9Y6E0 443 aa12.74□□□□□ -0.37
LSMEM1-203ENST00000455302 PYGBP11216 843 aa12.73□□□□□ -0.37
LSMEM1-203ENST00000455302 TPRNQ4KMQ1 711 aa12.73□□□□□ -0.37
LSMEM1-203ENST00000455302 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
LSMEM1-203ENST00000455302 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
LSMEM1-203ENST00000455302 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
LSMEM1-203ENST00000455302 ARHGEF11O15085 1522 aa12.71□□□□□ -0.38
LSMEM1-203ENST00000455302 URB2Q14146 1524 aaKnown RBP12.7□□□□□ -0.38
LSMEM1-203ENST00000455302 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
LSMEM1-203ENST00000455302 CFTRP13569 1480 aa12.69□□□□□ -0.38
LSMEM1-203ENST00000455302 WIZO95785 1651 aa12.67□□□□□ -0.38
LSMEM1-203ENST00000455302 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
LSMEM1-203ENST00000455302 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
LSMEM1-203ENST00000455302 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
LSMEM1-203ENST00000455302 IFT140Q96RY7 1462 aa12.61□□□□□ -0.39
LSMEM1-203ENST00000455302 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
LSMEM1-203ENST00000455302 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
LSMEM1-203ENST00000455302 PDAP1Q13442 181 aaKnown RBP12.57□□□□□ -0.4
LSMEM1-203ENST00000455302 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
LSMEM1-203ENST00000455302 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
LSMEM1-203ENST00000455302 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
LSMEM1-203ENST00000455302 TOP2AP11388 1531 aaKnown RBP12.52□□□□□ -0.41
LSMEM1-203ENST00000455302 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
LSMEM1-203ENST00000455302 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
LSMEM1-203ENST00000455302 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
LSMEM1-203ENST00000455302 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
LSMEM1-203ENST00000455302 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
LSMEM1-203ENST00000455302 WDR70Q9NW82 654 aa12.48□□□□□ -0.41
LSMEM1-203ENST00000455302 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
LSMEM1-203ENST00000455302 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.41
LSMEM1-203ENST00000455302 PSEN1P49768 467 aa12.46□□□□□ -0.41
LSMEM1-203ENST00000455302 PCDHB8Q9UN66 801 aa12.46□□□□□ -0.41
LSMEM1-203ENST00000455302 PCDHB13Q9Y5F0 798 aa12.46□□□□□ -0.41
LSMEM1-203ENST00000455302 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
LSMEM1-203ENST00000455302 CHD1O14646 1710 aa12.43□□□□□ -0.42
LSMEM1-203ENST00000455302 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms