RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 ADAMTS12P58397 1594 aa38.39■■■■□ 3.74
MCF2L-219ENST00000453297 FHAD1B1AJZ9 1412 aa38.39■■■■□ 3.74
MCF2L-219ENST00000453297 SNAPC4Q5SXM2 1469 aa38.22■■■■□ 3.71
MCF2L-219ENST00000453297 EFCAB5A4FU69 1503 aa38.17■■■■□ 3.7
MCF2L-219ENST00000453297 MAGI1Q96QZ7 1491 aaPredicted RBP38.12■■■■□ 3.69
MCF2L-219ENST00000453297 APLP2Q06481 763 aa38.11■■■■□ 3.69
MCF2L-219ENST00000453297 TTBK1Q5TCY1 1321 aaPredicted RBP38.07■■■■□ 3.68
MCF2L-219ENST00000453297 SAMD9Q5K651 1589 aa38.02■■■■□ 3.68
MCF2L-219ENST00000453297 GRIN2AQ12879 1464 aa38.02■■■■□ 3.68
MCF2L-219ENST00000453297 P3H3Q8IVL6 736 aa38.02■■■■□ 3.68
MCF2L-219ENST00000453297 SYNJ2O15056 1496 aa38■■■■□ 3.67
MCF2L-219ENST00000453297 IQGAP2Q13576 1575 aa37.99■■■■□ 3.67
MCF2L-219ENST00000453297 FHOD3Q2V2M9 1422 aa37.99■■■■□ 3.67
MCF2L-219ENST00000453297 CHMP7Q8WUX9 453 aaPredicted RBP37.89■■■■□ 3.66
MCF2L-219ENST00000453297 KIAA0586Q9BVV6 1533 aa37.88■■■■□ 3.65
MCF2L-219ENST00000453297 PCF11O94913 1555 aaKnown RBP37.86■■■■□ 3.65
MCF2L-219ENST00000453297 FMN1Q68DA7 1419 aa37.82■■■■□ 3.64
MCF2L-219ENST00000453297 MAP3K1Q13233 1512 aa37.81■■■■□ 3.64
MCF2L-219ENST00000453297 UGGT2Q9NYU1 1516 aa37.81■■■■□ 3.64
MCF2L-219ENST00000453297 CEP170Q5SW79 1584 aa37.8■■■■□ 3.64
MCF2L-219ENST00000453297 FBLN2P98095 1184 aa37.79■■■■□ 3.64
MCF2L-219ENST00000453297 KANK4Q5T7N3 995 aaPredicted RBP37.79■■■■□ 3.64
MCF2L-219ENST00000453297 CASKIN1Q8WXD9 1431 aa37.77■■■■□ 3.64
MCF2L-219ENST00000453297 TIAM1Q13009 1591 aa37.77■■■■□ 3.64
MCF2L-219ENST00000453297 FYCO1Q9BQS8 1478 aa37.77■■■■□ 3.64
MCF2L-219ENST00000453297 NUP160Q12769 1436 aa37.73■■■■□ 3.63
MCF2L-219ENST00000453297 CFAP43Q8NDM7 1665 aa37.69■■■■□ 3.62
MCF2L-219ENST00000453297 ATP1B4Q9UN42 357 aaPredicted RBP37.63■■■■□ 3.61
MCF2L-219ENST00000453297 DISP1Q96F81 1524 aa37.62■■■■□ 3.61
MCF2L-219ENST00000453297 KIAA0556O60303 1618 aa37.61■■■■□ 3.61
MCF2L-219ENST00000453297 CHD1O14646 1710 aa37.59■■■■□ 3.61
MCF2L-219ENST00000453297 LRRC9Q6ZRR7 1453 aa37.59■■■■□ 3.61
MCF2L-219ENST00000453297 HRCP23327 699 aa37.59■■■■□ 3.61
MCF2L-219ENST00000453297 LRRIQ1Q96JM4 1722 aa37.53■■■■□ 3.6
MCF2L-219ENST00000453297 JPH4Q96JJ6 628 aa37.47■■■■□ 3.59
MCF2L-219ENST00000453297 HECW1Q76N89 1606 aa37.43■■■■□ 3.58
MCF2L-219ENST00000453297 CARMIL2Q6F5E8 1435 aa37.39■■■■□ 3.58
MCF2L-219ENST00000453297 RRBP1Q9P2E9 1410 aaKnown RBP37.39■■■■□ 3.58
MCF2L-219ENST00000453297 CCDC18Q5T9S5 1454 aa37.35■■■■□ 3.57
MCF2L-219ENST00000453297 EPRSP07814 1512 aaKnown RBP37.28■■■■□ 3.56
MCF2L-219ENST00000453297 RAPGEF6Q8TEU7 1601 aa37.27■■■■□ 3.56
MCF2L-219ENST00000453297 HNRNPUL2Q1KMD3 747 aaKnown RBP37.26■■■■□ 3.56
MCF2L-219ENST00000453297 MTUS2Q5JR59 1369 aa37.26■■■■□ 3.55
MCF2L-219ENST00000453297 PHLDB1Q86UU1 1377 aa37.26■■■■□ 3.55
MCF2L-219ENST00000453297 CCNB3Q8WWL7 1395 aa37.25■■■■□ 3.55
MCF2L-219ENST00000453297 SHROOM2Q13796 1616 aa37.21■■■■□ 3.55
MCF2L-219ENST00000453297 EHBP1L1Q8N3D4 1523 aa37.21■■■■□ 3.55
MCF2L-219ENST00000453297 PRG4Q92954 1404 aaPredicted RBP37.21■■■■□ 3.55
MCF2L-219ENST00000453297 CDK13Q14004 1512 aaKnown RBP37.19■■■■□ 3.54
MCF2L-219ENST00000453297 MAGI3Q5TCQ9 1506 aa37.18■■■■□ 3.54
MCF2L-219ENST00000453297 NUP153P49790 1475 aaKnown RBP37.18■■■■□ 3.54
MCF2L-219ENST00000453297 SUPT6HQ7KZ85 1726 aaKnown RBP37.14■■■■□ 3.54
MCF2L-219ENST00000453297 PLB1Q6P1J6 1458 aa37.13■■■■□ 3.53
MCF2L-219ENST00000453297 CLASP1Q7Z460 1538 aa37.12■■■■□ 3.53
MCF2L-219ENST00000453297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.11■■■■□ 3.53
MCF2L-219ENST00000453297 NCOA2Q15596 1464 aa37.09■■■■□ 3.53
MCF2L-219ENST00000453297 ARID3CA6NKF2 412 aa37.07■■■■□ 3.52
MCF2L-219ENST00000453297 ABCA8O94911 1581 aa37.06■■■■□ 3.52
MCF2L-219ENST00000453297 ZEB1P37275 1124 aaPredicted RBP37.05■■■■□ 3.52
MCF2L-219ENST00000453297 ARHGEF11O15085 1522 aa37.03■■■■□ 3.52
MCF2L-219ENST00000453297 PTPRGP23470 1445 aa36.99■■■■□ 3.51
MCF2L-219ENST00000453297 CCER1Q8TC90 406 aaPredicted RBP36.99■■■■□ 3.51
MCF2L-219ENST00000453297 FGD6Q6ZV73 1430 aa36.97■■■■□ 3.51
MCF2L-219ENST00000453297 ERCC6L2Q5T890 1561 aa36.95■■■■□ 3.51
MCF2L-219ENST00000453297 MYOM3Q5VTT5 1437 aa36.95■■■■□ 3.51
MCF2L-219ENST00000453297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.94■■■■□ 3.51e-7■■□□□ 13.6
MCF2L-219ENST00000453297 FAM50AQ14320 339 aaKnown RBP36.93■■■■□ 3.5
MCF2L-219ENST00000453297 CDK11AQ9UQ88 783 aaPredicted RBP36.92■■■■□ 3.5
MCF2L-219ENST00000453297 ITGAEP38570 1179 aa36.89■■■■□ 3.5
MCF2L-219ENST00000453297 ATP10BO94823 1461 aa36.83■■■■□ 3.49
MCF2L-219ENST00000453297 TROQ12816 1431 aaPredicted RBP36.82■■■■□ 3.48
MCF2L-219ENST00000453297 UACAQ9BZF9 1416 aa36.79■■■■□ 3.48
MCF2L-219ENST00000453297 PTPN23Q9H3S7 1636 aa36.79■■■■□ 3.48
MCF2L-219ENST00000453297 ADCY10Q96PN6 1610 aa36.75■■■■□ 3.47
MCF2L-219ENST00000453297 MIA2Q96PC5 1412 aa36.72■■■■□ 3.47
MCF2L-219ENST00000453297 TCOF1Q13428 1488 aaKnown RBP36.72■■■■□ 3.47
MCF2L-219ENST00000453297 ABCC2Q92887 1545 aa36.68■■■■□ 3.46
MCF2L-219ENST00000453297 KIF14Q15058 1648 aa36.67■■■■□ 3.46
MCF2L-219ENST00000453297 PLEKHD1A6NEE1 506 aa36.67■■■■□ 3.46
MCF2L-219ENST00000453297 OSCARQ8IYS5 282 aa36.66■■■■□ 3.46
MCF2L-219ENST00000453297 SETD5Q9C0A6 1442 aa36.61■■■■□ 3.45
MCF2L-219ENST00000453297 RAB3GAP2Q9H2M9 1393 aa36.58■■■■□ 3.45
MCF2L-219ENST00000453297 PTPRKQ15262 1439 aa36.58■■■■□ 3.45
MCF2L-219ENST00000453297 UHRF1BP1LA0JNW5 1464 aa36.57■■■■□ 3.45
MCF2L-219ENST00000453297 ITSN2Q9NZM3 1697 aa36.57■■■■□ 3.45
MCF2L-219ENST00000453297 DHX57Q6P158 1386 aaKnown RBP36.54■■■■□ 3.44
MCF2L-219ENST00000453297 GPATCH8Q9UKJ3 1502 aaKnown RBP36.52■■■■□ 3.44
MCF2L-219ENST00000453297 ABCC10Q5T3U5 1492 aa36.51■■■■□ 3.43
MCF2L-219ENST00000453297 CDC42BPAQ5VT25 1732 aa36.46■■■■□ 3.43
MCF2L-219ENST00000453297 ZCCHC11Q5TAX3 1644 aaKnown RBP36.45■■■■□ 3.43
MCF2L-219ENST00000453297 KDM5BQ9UGL1 1544 aa36.44■■■■□ 3.42
MCF2L-219ENST00000453297 CFDP1Q9UEE9 299 aaPredicted RBP36.43■■■■□ 3.42
MCF2L-219ENST00000453297 HFM1A2PYH4 1435 aa36.42■■■■□ 3.42
MCF2L-219ENST00000453297 ZNF644Q9H582 1327 aaPredicted RBP36.4■■■■□ 3.42
MCF2L-219ENST00000453297 CLSPNQ9HAW4 1339 aa36.4■■■■□ 3.42
MCF2L-219ENST00000453297 DNMT1P26358 1616 aaKnown RBP36.39■■■■□ 3.42
MCF2L-219ENST00000453297 CAMSAP2Q08AD1 1489 aa36.38■■■■□ 3.41
MCF2L-219ENST00000453297 DAPK1P53355 1430 aa36.35■■■■□ 3.41
MCF2L-219ENST00000453297 NAIPQ13075 1403 aa36.34■■■■□ 3.41
MCF2L-219ENST00000453297 ABCC5O15440 1437 aa36.31■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms