RNA–Protein interactions for RNA: ENST00000452260.6

SATB1-208, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-208ENST00000452260 JPH4Q96JJ6 628 aa17.54■□□□□ 0.4
SATB1-208ENST00000452260 PRG4Q92954 1404 aaPredicted RBP17.53■□□□□ 0.4
SATB1-208ENST00000452260 NPM1P06748 294 aaKnown RBP eCLIP17.48■□□□□ 0.39
SATB1-208ENST00000452260 FAM69CQ0P6D2 419 aa17.43■□□□□ 0.38
SATB1-208ENST00000452260 KIF13AQ9H1H9 1805 aa17.39■□□□□ 0.37
SATB1-208ENST00000452260 ABCC10Q5T3U5 1492 aa17.38■□□□□ 0.37
SATB1-208ENST00000452260 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
SATB1-208ENST00000452260 MAPKBP1O60336 1514 aa17.35■□□□□ 0.37
SATB1-208ENST00000452260 KIAA0586Q9BVV6 1533 aa17.34■□□□□ 0.37
SATB1-208ENST00000452260 IGF1RP08069 1367 aa17.32■□□□□ 0.36
SATB1-208ENST00000452260 KIF27Q86VH2 1401 aa17.31■□□□□ 0.36
SATB1-208ENST00000452260 ADCY10Q96PN6 1610 aa17.29■□□□□ 0.36
SATB1-208ENST00000452260 DIP2BQ9P265 1576 aa17.28■□□□□ 0.36
SATB1-208ENST00000452260 CUL7Q14999 1698 aa17.26■□□□□ 0.35
SATB1-208ENST00000452260 PTPRGP23470 1445 aa17.25■□□□□ 0.35
SATB1-208ENST00000452260 KDM6BO15054 1643 aa17.22■□□□□ 0.35
SATB1-208ENST00000452260 CARMIL1Q5VZK9 1371 aa17.22■□□□□ 0.35
SATB1-208ENST00000452260 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.35
SATB1-208ENST00000452260 CARMIL2Q6F5E8 1435 aa17.21■□□□□ 0.35
SATB1-208ENST00000452260 TNIKQ9UKE5 1360 aa17.2■□□□□ 0.34
SATB1-208ENST00000452260 KDM4FA0A1W2PPD8 638 aa17.17■□□□□ 0.34
SATB1-208ENST00000452260 TSPOAP1O95153 1857 aa17.15■□□□□ 0.34
SATB1-208ENST00000452260 ABCC2Q92887 1545 aa17.15■□□□□ 0.34
SATB1-208ENST00000452260 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
SATB1-208ENST00000452260 ASXL2Q76L83 1435 aa17.12■□□□□ 0.33
SATB1-208ENST00000452260 IQGAP2Q13576 1575 aa17.11■□□□□ 0.33
SATB1-208ENST00000452260 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
SATB1-208ENST00000452260 UHRF1BP1LA0JNW5 1464 aa17.09■□□□□ 0.33
SATB1-208ENST00000452260 GLI2P10070 1586 aa17.08■□□□□ 0.32
SATB1-208ENST00000452260 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
SATB1-208ENST00000452260 RAPGEF2Q9Y4G8 1499 aa17.02■□□□□ 0.32
SATB1-208ENST00000452260 EPRSP07814 1512 aaKnown RBP17.01■□□□□ 0.31
SATB1-208ENST00000452260 KDM5BQ9UGL1 1544 aa17.01■□□□□ 0.31
SATB1-208ENST00000452260 UGGT2Q9NYU1 1516 aa17■□□□□ 0.31
SATB1-208ENST00000452260 TEX14Q8IWB6 1497 aa16.99■□□□□ 0.31
SATB1-208ENST00000452260 PPRC1Q5VV67 1664 aaKnown RBP16.99■□□□□ 0.31
SATB1-208ENST00000452260 ADGRL1O94910 1474 aa16.96■□□□□ 0.31
SATB1-208ENST00000452260 COL17A1Q9UMD9 1497 aaPredicted RBP16.95■□□□□ 0.3
SATB1-208ENST00000452260 KIAA0556O60303 1618 aa16.94■□□□□ 0.3
SATB1-208ENST00000452260 MAP3K4Q9Y6R4 1608 aa16.94■□□□□ 0.3
SATB1-208ENST00000452260 ZCCHC11Q5TAX3 1644 aaKnown RBP16.92■□□□□ 0.3
SATB1-208ENST00000452260 WDR7Q9Y4E6 1490 aa16.91■□□□□ 0.3
SATB1-208ENST00000452260 ILDR1Q86SU0 546 aaPredicted RBP16.89■□□□□ 0.29
SATB1-208ENST00000452260 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
SATB1-208ENST00000452260 FAM9AQ8IZU1 332 aaPredicted RBP16.87■□□□□ 0.29
SATB1-208ENST00000452260 CD109Q6YHK3 1445 aa16.87■□□□□ 0.29
SATB1-208ENST00000452260 KCNH8Q96L42 1107 aa16.86■□□□□ 0.29
SATB1-208ENST00000452260 MAGI3Q5TCQ9 1506 aa16.84■□□□□ 0.29
SATB1-208ENST00000452260 CTTNBP2Q8WZ74 1663 aa16.81■□□□□ 0.28
SATB1-208ENST00000452260 ABCA8O94911 1581 aa16.81■□□□□ 0.28
SATB1-208ENST00000452260 CFAP43Q8NDM7 1665 aa16.79■□□□□ 0.28
SATB1-208ENST00000452260 HECW2Q9P2P5 1572 aa16.78■□□□□ 0.28
SATB1-208ENST00000452260 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
SATB1-208ENST00000452260 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
SATB1-208ENST00000452260 P3H3Q8IVL6 736 aa16.72■□□□□ 0.27
SATB1-208ENST00000452260 PHLDB1Q86UU1 1377 aa16.71■□□□□ 0.27
SATB1-208ENST00000452260 ARAP3Q8WWN8 1544 aa16.7■□□□□ 0.26
SATB1-208ENST00000452260 ATP10BO94823 1461 aa16.69■□□□□ 0.26
SATB1-208ENST00000452260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
SATB1-208ENST00000452260 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
SATB1-208ENST00000452260 FOXD1Q16676 465 aa16.65■□□□□ 0.26
SATB1-208ENST00000452260 KIF21BO75037 1637 aa16.65■□□□□ 0.26
SATB1-208ENST00000452260 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
SATB1-208ENST00000452260 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
SATB1-208ENST00000452260 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
SATB1-208ENST00000452260 NEO1Q92859 1461 aa16.61■□□□□ 0.25
SATB1-208ENST00000452260 ARID4BQ4LE39 1312 aaPredicted RBP16.59■□□□□ 0.25
SATB1-208ENST00000452260 PTPRMP28827 1452 aa16.58■□□□□ 0.24
SATB1-208ENST00000452260 RAPGEF6Q8TEU7 1601 aa16.58■□□□□ 0.24
SATB1-208ENST00000452260 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
SATB1-208ENST00000452260 PLEKHD1A6NEE1 506 aa16.57■□□□□ 0.24
SATB1-208ENST00000452260 FBXO41Q8TF61 875 aa16.56■□□□□ 0.24
SATB1-208ENST00000452260 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
SATB1-208ENST00000452260 ADAMTSL3P82987 1691 aa16.55■□□□□ 0.24
SATB1-208ENST00000452260 NUP153P49790 1475 aaKnown RBP16.53■□□□□ 0.24
SATB1-208ENST00000452260 EEA1Q15075 1411 aa16.52■□□□□ 0.23
SATB1-208ENST00000452260 DENND4BO75064 1496 aaPredicted RBP16.51■□□□□ 0.23
SATB1-208ENST00000452260 FHOD3Q2V2M9 1422 aa16.5■□□□□ 0.23
SATB1-208ENST00000452260 BCORL1Q5H9F3 1711 aa16.49■□□□□ 0.23
SATB1-208ENST00000452260 FRMPD1Q5SYB0 1578 aa16.48■□□□□ 0.23
SATB1-208ENST00000452260 AKNAQ7Z591 1439 aa16.48■□□□□ 0.23
SATB1-208ENST00000452260 POGZQ7Z3K3 1410 aa16.46■□□□□ 0.23
SATB1-208ENST00000452260 FANCAO15360 1455 aa16.46■□□□□ 0.23
SATB1-208ENST00000452260 PCF11O94913 1555 aaKnown RBP16.46■□□□□ 0.23
SATB1-208ENST00000452260 MADDQ8WXG6 1647 aa16.45■□□□□ 0.22
SATB1-208ENST00000452260 ARHGEF40Q8TER5 1519 aa16.45■□□□□ 0.22
SATB1-208ENST00000452260 CFAP74Q9C0B2 1584 aa16.44■□□□□ 0.22
SATB1-208ENST00000452260 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
SATB1-208ENST00000452260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.22
SATB1-208ENST00000452260 EFCAB5A4FU69 1503 aa16.41■□□□□ 0.22
SATB1-208ENST00000452260 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
SATB1-208ENST00000452260 RICTORQ6R327 1708 aa16.4■□□□□ 0.22
SATB1-208ENST00000452260 MAGI2Q86UL8 1455 aa16.4■□□□□ 0.22
SATB1-208ENST00000452260 RIMS1Q86UR5 1692 aaKnown RBP16.39■□□□□ 0.21
SATB1-208ENST00000452260 ZFYVE16Q7Z3T8 1539 aa16.39■□□□□ 0.21
SATB1-208ENST00000452260 ZMYM4Q5VZL5 1548 aa16.38■□□□□ 0.21
SATB1-208ENST00000452260 HSPA2P54652 639 aa16.37■□□□□ 0.21
SATB1-208ENST00000452260 MLECQ14165 292 aa16.37■□□□□ 0.21
SATB1-208ENST00000452260 YEATS2Q9ULM3 1422 aa16.36■□□□□ 0.21
SATB1-208ENST00000452260 TTC37Q6PGP7 1564 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms