RNA–Protein interactions for RNA: ENST00000450299.6

CCDC196-206, Transcript of coiled-coil domain containing 196, humanhuman

TSL 3

Gene CCDC196, Length 722 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-206ENST00000450299 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
CCDC196-206ENST00000450299 POTEB2H3BUK9 544 aa13.02□□□□□ -0.33
CCDC196-206ENST00000450299 PHF12Q96QT6 1004 aa13.02□□□□□ -0.33
CCDC196-206ENST00000450299 CUX2O14529 1486 aa13□□□□□ -0.33
CCDC196-206ENST00000450299 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC196-206ENST00000450299 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
CCDC196-206ENST00000450299 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
CCDC196-206ENST00000450299 PELP1Q8IZL8 1130 aaKnown RBP12.93□□□□□ -0.34
CCDC196-206ENST00000450299 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.35
CCDC196-206ENST00000450299 POTEMA6NI47 508 aa12.85□□□□□ -0.35
CCDC196-206ENST00000450299 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
CCDC196-206ENST00000450299 MS4A3Q96HJ5 214 aa12.83□□□□□ -0.36
CCDC196-206ENST00000450299 POTEGQ6S5H5 508 aa12.81□□□□□ -0.36
CCDC196-206ENST00000450299 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
CCDC196-206ENST00000450299 ATMINO43313 823 aaPredicted RBP12.8□□□□□ -0.36
CCDC196-206ENST00000450299 C7P10643 843 aa12.79□□□□□ -0.36
CCDC196-206ENST00000450299 SLC39A7Q92504 469 aa12.78□□□□□ -0.36
CCDC196-206ENST00000450299 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
CCDC196-206ENST00000450299 POTEJP0CG39 1038 aa12.77□□□□□ -0.37
CCDC196-206ENST00000450299 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.37
CCDC196-206ENST00000450299 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
CCDC196-206ENST00000450299 MAMSTRQ6ZN01 415 aa12.7□□□□□ -0.38
CCDC196-206ENST00000450299 ERCC6Q03468 1493 aa12.7□□□□□ -0.38
CCDC196-206ENST00000450299 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
CCDC196-206ENST00000450299 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
CCDC196-206ENST00000450299 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
CCDC196-206ENST00000450299 PROM2Q8N271 834 aa12.66□□□□□ -0.38
CCDC196-206ENST00000450299 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
CCDC196-206ENST00000450299 SCUBE2Q9NQ36 999 aa12.61□□□□□ -0.39
CCDC196-206ENST00000450299 LCE2DQ5TA82 110 aaPredicted RBP12.6□□□□□ -0.39
CCDC196-206ENST00000450299 MYO15BQ96JP2 1530 aa12.59□□□□□ -0.39
CCDC196-206ENST00000450299 BMP2KQ9NSY1 1161 aaPredicted RBP12.59□□□□□ -0.39
CCDC196-206ENST00000450299 FAM163AQ96GL9 167 aaPredicted RBP12.58□□□□□ -0.4
CCDC196-206ENST00000450299 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
CCDC196-206ENST00000450299 TRPC6Q9Y210 931 aa12.57□□□□□ -0.4
CCDC196-206ENST00000450299 MAP3K13O43283 966 aa12.54□□□□□ -0.4
CCDC196-206ENST00000450299 TIE1P35590 1138 aa12.52□□□□□ -0.41
CCDC196-206ENST00000450299 RASEFQ8IZ41 740 aa12.5□□□□□ -0.41
CCDC196-206ENST00000450299 MIER1Q8N108 512 aa12.5□□□□□ -0.41
CCDC196-206ENST00000450299 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
CCDC196-206ENST00000450299 TTLL13PA6NNM8 815 aa12.45□□□□□ -0.42
CCDC196-206ENST00000450299 COLQQ9Y215 455 aaPredicted RBP12.45□□□□□ -0.42
CCDC196-206ENST00000450299 SEC24BO95487 1268 aa12.43□□□□□ -0.42
CCDC196-206ENST00000450299 SCRIBQ14160 1630 aa12.42□□□□□ -0.42
CCDC196-206ENST00000450299 SGIP1Q9BQI5 828 aa12.37□□□□□ -0.43
CCDC196-206ENST00000450299 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
CCDC196-206ENST00000450299 THOC2Q8NI27 1593 aaKnown RBP12.36□□□□□ -0.43
CCDC196-206ENST00000450299 IER5LQ5T953 404 aa12.36□□□□□ -0.43
CCDC196-206ENST00000450299 PCDHB13Q9Y5F0 798 aa12.35□□□□□ -0.43
CCDC196-206ENST00000450299 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
CCDC196-206ENST00000450299 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
CCDC196-206ENST00000450299 NESP48681 1621 aa12.32□□□□□ -0.44
CCDC196-206ENST00000450299 CDAN1Q8IWY9 1227 aa12.31□□□□□ -0.44
CCDC196-206ENST00000450299 NUBP1P53384 320 aa12.29□□□□□ -0.44
CCDC196-206ENST00000450299 IFNL1Q8IU54 200 aa12.28□□□□□ -0.44
CCDC196-206ENST00000450299 SLAIN1Q8ND83 568 aa12.26□□□□□ -0.45
CCDC196-206ENST00000450299 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
CCDC196-206ENST00000450299 TMEM106CQ9BVX2 250 aa12.24□□□□□ -0.45
CCDC196-206ENST00000450299 RIMBP3CA6NJZ7 1639 aa12.23□□□□□ -0.45
CCDC196-206ENST00000450299 RIMBP3BA6NNM3 1639 aa12.23□□□□□ -0.45
CCDC196-206ENST00000450299 RIMBP3Q9UFD9 1639 aa12.23□□□□□ -0.45
CCDC196-206ENST00000450299 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
CCDC196-206ENST00000450299 ST18O60284 1047 aa12.23□□□□□ -0.45
CCDC196-206ENST00000450299 PLCG2P16885 1265 aa12.2□□□□□ -0.46
CCDC196-206ENST00000450299 FAM212AQ96EL1 285 aa12.19□□□□□ -0.46
CCDC196-206ENST00000450299 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
CCDC196-206ENST00000450299 IRX5P78411 483 aaPredicted RBP12.18□□□□□ -0.46
CCDC196-206ENST00000450299 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
CCDC196-206ENST00000450299 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
CCDC196-206ENST00000450299 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
CCDC196-206ENST00000450299 CYB5RLQ6IPT4 315 aa12.09□□□□□ -0.47
CCDC196-206ENST00000450299 TMEM121BQ9BXQ6 578 aaPredicted RBP12.08□□□□□ -0.48
CCDC196-206ENST00000450299 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
CCDC196-206ENST00000450299 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
CCDC196-206ENST00000450299 PYGBP11216 843 aa12.05□□□□□ -0.48
CCDC196-206ENST00000450299 DCAF8Q5TAQ9 597 aa12.05□□□□□ -0.48
CCDC196-206ENST00000450299 SNPHO15079 494 aa12.04□□□□□ -0.48
CCDC196-206ENST00000450299 MMRN1Q13201 1228 aa12.03□□□□□ -0.48
CCDC196-206ENST00000450299 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.03□□□□□ -0.48
CCDC196-206ENST00000450299 LAMC3Q9Y6N6 1575 aa12.02□□□□□ -0.49
CCDC196-206ENST00000450299 SPNS2Q8IVW8 549 aa12.02□□□□□ -0.49
CCDC196-206ENST00000450299 PCDHB8Q9UN66 801 aa12.02□□□□□ -0.49
CCDC196-206ENST00000450299 MARVELD3Q96A59 401 aa11.99□□□□□ -0.49
CCDC196-206ENST00000450299 PDS5BQ9NTI5 1447 aa11.99□□□□□ -0.49
CCDC196-206ENST00000450299 ZCCHC6Q5VYS8 1495 aaKnown RBP11.97□□□□□ -0.49
CCDC196-206ENST00000450299 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
CCDC196-206ENST00000450299 FKBP8Q14318 412 aa11.97□□□□□ -0.49
CCDC196-206ENST00000450299 WDR62O43379 1518 aa11.95□□□□□ -0.5
CCDC196-206ENST00000450299 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
CCDC196-206ENST00000450299 HMGXB3Q12766 1538 aa11.94□□□□□ -0.5
CCDC196-206ENST00000450299 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
CCDC196-206ENST00000450299 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
CCDC196-206ENST00000450299 ARAP1Q96P48 1450 aa11.89□□□□□ -0.51
CCDC196-206ENST00000450299 MKRN3Q13064 507 aaKnown RBP11.87□□□□□ -0.51
CCDC196-206ENST00000450299 ZNF467Q7Z7K2 595 aaPredicted RBP11.87□□□□□ -0.51
CCDC196-206ENST00000450299 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
CCDC196-206ENST00000450299 EMP3P54852 163 aa11.86□□□□□ -0.51
CCDC196-206ENST00000450299 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
CCDC196-206ENST00000450299 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
CCDC196-206ENST00000450299 GSE1Q14687 1217 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms