RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 DCAF8L1A6NGE4 600 aa13.79□□□□□ -0.2
RBM39-218ENST00000449489 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
RBM39-218ENST00000449489 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
RBM39-218ENST00000449489 CUX1P39880 1505 aa13.71□□□□□ -0.21
RBM39-218ENST00000449489 PBRM1Q86U86 1689 aa13.71□□□□□ -0.21
RBM39-218ENST00000449489 KIF13AQ9H1H9 1805 aa13.7□□□□□ -0.22
RBM39-218ENST00000449489 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
RBM39-218ENST00000449489 ERCC6L2Q5T890 1561 aa13.67□□□□□ -0.22
RBM39-218ENST00000449489 ABCA10Q8WWZ4 1543 aa13.67□□□□□ -0.22
RBM39-218ENST00000449489 NUP160Q12769 1436 aa13.66□□□□□ -0.22
RBM39-218ENST00000449489 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
RBM39-218ENST00000449489 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
RBM39-218ENST00000449489 GRIN2AQ12879 1464 aa13.66□□□□□ -0.22
RBM39-218ENST00000449489 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
RBM39-218ENST00000449489 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
RBM39-218ENST00000449489 ILDR1Q86SU0 546 aaPredicted RBP13.64□□□□□ -0.23
RBM39-218ENST00000449489 KDM4FA0A1W2PPD8 638 aa13.6□□□□□ -0.23
RBM39-218ENST00000449489 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
RBM39-218ENST00000449489 ABCC10Q5T3U5 1492 aa13.6□□□□□ -0.23
RBM39-218ENST00000449489 FAM69CQ0P6D2 419 aa13.57□□□□□ -0.24
RBM39-218ENST00000449489 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
RBM39-218ENST00000449489 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
RBM39-218ENST00000449489 MAPKBP1O60336 1514 aa13.56□□□□□ -0.24
RBM39-218ENST00000449489 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
RBM39-218ENST00000449489 PRG4Q92954 1404 aaPredicted RBP13.52□□□□□ -0.25
RBM39-218ENST00000449489 DIP2BQ9P265 1576 aa13.52□□□□□ -0.25
RBM39-218ENST00000449489 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
RBM39-218ENST00000449489 JPH4Q96JJ6 628 aa13.51□□□□□ -0.25
RBM39-218ENST00000449489 KDM6BO15054 1643 aa13.5□□□□□ -0.25
RBM39-218ENST00000449489 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
RBM39-218ENST00000449489 RNF39Q9H2S5 420 aa13.44□□□□□ -0.26
RBM39-218ENST00000449489 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
RBM39-218ENST00000449489 TOP2BQ02880 1626 aa13.4□□□□□ -0.26
RBM39-218ENST00000449489 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
RBM39-218ENST00000449489 TSPOAP1O95153 1857 aa13.4□□□□□ -0.26
RBM39-218ENST00000449489 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
RBM39-218ENST00000449489 FOXD4L1Q9NU39 408 aa13.38□□□□□ -0.27
RBM39-218ENST00000449489 ADGRL1O94910 1474 aa13.35□□□□□ -0.27
RBM39-218ENST00000449489 KIAA0586Q9BVV6 1533 aa13.33□□□□□ -0.28
RBM39-218ENST00000449489 GLI2P10070 1586 aa13.32□□□□□ -0.28
RBM39-218ENST00000449489 HECW2Q9P2P5 1572 aa13.31□□□□□ -0.28
RBM39-218ENST00000449489 ZBTB22O15209 634 aa13.3□□□□□ -0.28
RBM39-218ENST00000449489 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
RBM39-218ENST00000449489 PPRC1Q5VV67 1664 aaKnown RBP13.29□□□□□ -0.28
RBM39-218ENST00000449489 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
RBM39-218ENST00000449489 ABCC2Q92887 1545 aa13.28□□□□□ -0.28
RBM39-218ENST00000449489 PTPRGP23470 1445 aa13.27□□□□□ -0.29
RBM39-218ENST00000449489 FBXO41Q8TF61 875 aa13.26□□□□□ -0.29
RBM39-218ENST00000449489 ASXL2Q76L83 1435 aa13.25□□□□□ -0.29
RBM39-218ENST00000449489 COL17A1Q9UMD9 1497 aaPredicted RBP13.24□□□□□ -0.29
RBM39-218ENST00000449489 UHRF1BP1LA0JNW5 1464 aa13.23□□□□□ -0.29
RBM39-218ENST00000449489 TEX14Q8IWB6 1497 aa13.22□□□□□ -0.29
RBM39-218ENST00000449489 TNIKQ9UKE5 1360 aa13.21□□□□□ -0.29
RBM39-218ENST00000449489 CARMIL2Q6F5E8 1435 aa13.21□□□□□ -0.3
RBM39-218ENST00000449489 IGF1RP08069 1367 aa13.2□□□□□ -0.3
RBM39-218ENST00000449489 MAP3K4Q9Y6R4 1608 aa13.19□□□□□ -0.3
RBM39-218ENST00000449489 EPRSP07814 1512 aaKnown RBP13.18□□□□□ -0.3
RBM39-218ENST00000449489 CUL7Q14999 1698 aa13.18□□□□□ -0.3
RBM39-218ENST00000449489 UACAQ9BZF9 1416 aa13.16□□□□□ -0.3
RBM39-218ENST00000449489 KDM5BQ9UGL1 1544 aa13.16□□□□□ -0.3
RBM39-218ENST00000449489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.15□□□□□ -0.35e-22■■□□□ 11.9
RBM39-218ENST00000449489 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
RBM39-218ENST00000449489 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
RBM39-218ENST00000449489 MAGI3Q5TCQ9 1506 aa13.08□□□□□ -0.31
RBM39-218ENST00000449489 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
RBM39-218ENST00000449489 IQGAP2Q13576 1575 aa13.08□□□□□ -0.32
RBM39-218ENST00000449489 DISP1Q96F81 1524 aa13.08□□□□□ -0.32
RBM39-218ENST00000449489 TTBK1Q5TCY1 1321 aaPredicted RBP13.07□□□□□ -0.32
RBM39-218ENST00000449489 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
RBM39-218ENST00000449489 WDR7Q9Y4E6 1490 aa13.05□□□□□ -0.32
RBM39-218ENST00000449489 SUPT5HO00267 1087 aaKnown RBP13.04□□□□□ -0.32
RBM39-218ENST00000449489 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
RBM39-218ENST00000449489 CFAP43Q8NDM7 1665 aa13.03□□□□□ -0.32
RBM39-218ENST00000449489 CD109Q6YHK3 1445 aa13.03□□□□□ -0.32
RBM39-218ENST00000449489 UGGT2Q9NYU1 1516 aa13.02□□□□□ -0.33
RBM39-218ENST00000449489 ARAP3Q8WWN8 1544 aa13□□□□□ -0.33
RBM39-218ENST00000449489 PTPRMP28827 1452 aa12.99□□□□□ -0.33
RBM39-218ENST00000449489 ADAMTSL3P82987 1691 aa12.99□□□□□ -0.33
RBM39-218ENST00000449489 KIF21BO75037 1637 aa12.99□□□□□ -0.33
RBM39-218ENST00000449489 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
RBM39-218ENST00000449489 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
RBM39-218ENST00000449489 KIAA0556O60303 1618 aa12.96□□□□□ -0.33
RBM39-218ENST00000449489 ATXN8OSP0DMR3 200 aa12.96□□□□□ -0.33
RBM39-218ENST00000449489 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
RBM39-218ENST00000449489 KCNH8Q96L42 1107 aa12.92□□□□□ -0.34
RBM39-218ENST00000449489 RAPGEF2Q9Y4G8 1499 aa12.91□□□□□ -0.34
RBM39-218ENST00000449489 SOCS7O14512 581 aa12.91□□□□□ -0.34
RBM39-218ENST00000449489 ABCA8O94911 1581 aa12.9□□□□□ -0.34
RBM39-218ENST00000449489 BCORL1Q5H9F3 1711 aa12.89□□□□□ -0.35
RBM39-218ENST00000449489 GOLGA3Q08378 1498 aa12.88□□□□□ -0.35
RBM39-218ENST00000449489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
RBM39-218ENST00000449489 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
RBM39-218ENST00000449489 CERKQ8TCT0 537 aa12.87□□□□□ -0.35
RBM39-218ENST00000449489 NEO1Q92859 1461 aa12.85□□□□□ -0.35
RBM39-218ENST00000449489 MADDQ8WXG6 1647 aa12.84□□□□□ -0.35
RBM39-218ENST00000449489 ABCA9Q8IUA7 1624 aa12.84□□□□□ -0.35
RBM39-218ENST00000449489 RAPGEF3O95398 923 aa12.82□□□□□ -0.36
RBM39-218ENST00000449489 ILDR2Q71H61 639 aa12.82□□□□□ -0.36
RBM39-218ENST00000449489 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
RBM39-218ENST00000449489 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms