RNA–Protein interactions for RNA: ENST00000449261.6

BRPF3-206, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-206ENST00000449261 TNIKQ9UKE5 1360 aa15.49■□□□□ 0.07
BRPF3-206ENST00000449261 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
BRPF3-206ENST00000449261 CEP164Q9UPV0 1460 aa15.48■□□□□ 0.07
BRPF3-206ENST00000449261 HNRNPUQ00839 825 aaKnown RBP eCLIP15.46■□□□□ 0.06
BRPF3-206ENST00000449261 FAM9BQ8IZU0 186 aa15.46■□□□□ 0.06
BRPF3-206ENST00000449261 CFDP1Q9UEE9 299 aaPredicted RBP15.45■□□□□ 0.06
BRPF3-206ENST00000449261 TMC1Q8TDI8 760 aa15.41■□□□□ 0.06
BRPF3-206ENST00000449261 SALL2Q9Y467 1007 aaPredicted RBP15.4■□□□□ 0.06
BRPF3-206ENST00000449261 HIRIP3Q9BW71 556 aaPredicted RBP15.4■□□□□ 0.06
BRPF3-206ENST00000449261 MROH2BQ7Z745 1585 aa15.38■□□□□ 0.05
BRPF3-206ENST00000449261 EIF4G2P78344 907 aaKnown RBP eCLIP15.38■□□□□ 0.05
BRPF3-206ENST00000449261 CARMIL1Q5VZK9 1371 aa15.37■□□□□ 0.05
BRPF3-206ENST00000449261 CUX2O14529 1486 aa15.37■□□□□ 0.05
BRPF3-206ENST00000449261 RGL3Q3MIN7 710 aa15.36■□□□□ 0.05
BRPF3-206ENST00000449261 ERICH6BQ5W0A0 696 aa15.35■□□□□ 0.05
BRPF3-206ENST00000449261 MRS2Q9HD23 443 aa15.35■□□□□ 0.05
BRPF3-206ENST00000449261 SOGA1O94964 1423 aa15.34■□□□□ 0.05
BRPF3-206ENST00000449261 SENP3Q9H4L4 574 aaPredicted RBP15.34■□□□□ 0.05
BRPF3-206ENST00000449261 FKBP8Q14318 412 aa15.33■□□□□ 0.04
BRPF3-206ENST00000449261 UBE2Q2Q8WVN8 375 aa15.33■□□□□ 0.04
BRPF3-206ENST00000449261 PPP1R15AO75807 674 aaPredicted RBP15.32■□□□□ 0.04
BRPF3-206ENST00000449261 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
BRPF3-206ENST00000449261 WDR43Q15061 677 aaKnown RBP eCLIP15.31■□□□□ 0.04
BRPF3-206ENST00000449261 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
BRPF3-206ENST00000449261 ARID4BQ4LE39 1312 aaPredicted RBP15.27■□□□□ 0.04
BRPF3-206ENST00000449261 SMARCA2P51531 1590 aa15.27■□□□□ 0.04
BRPF3-206ENST00000449261 MIER1Q8N108 512 aa15.26■□□□□ 0.03
BRPF3-206ENST00000449261 PDS5BQ9NTI5 1447 aa15.25■□□□□ 0.03
BRPF3-206ENST00000449261 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
BRPF3-206ENST00000449261 ANP32AP39687 249 aaKnown RBP15.24■□□□□ 0.03
BRPF3-206ENST00000449261 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
BRPF3-206ENST00000449261 NPM2Q86SE8 214 aaKnown RBP15.22■□□□□ 0.03
BRPF3-206ENST00000449261 TDRD9Q8NDG6 1382 aaKnown RBP15.21■□□□□ 0.03
BRPF3-206ENST00000449261 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.2■□□□□ 0.02
BRPF3-206ENST00000449261 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
BRPF3-206ENST00000449261 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
BRPF3-206ENST00000449261 CARD11Q9BXL7 1154 aa15.19■□□□□ 0.02
BRPF3-206ENST00000449261 ANO8Q9HCE9 1232 aaPredicted RBP15.19■□□□□ 0.02
BRPF3-206ENST00000449261 PLEKHG5O94827 1062 aa15.18■□□□□ 0.02
BRPF3-206ENST00000449261 C14orf37Q86TY3 774 aa15.18■□□□□ 0.02
BRPF3-206ENST00000449261 PDE4CQ08493 712 aa15.17■□□□□ 0.02
BRPF3-206ENST00000449261 NCBP3Q53F19 620 aaKnown RBP15.17■□□□□ 0.02
BRPF3-206ENST00000449261 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
BRPF3-206ENST00000449261 CDCA8Q53HL2 280 aa15.16■□□□□ 0.02
BRPF3-206ENST00000449261 CADPSQ9ULU8 1353 aa15.14■□□□□ 0.01
BRPF3-206ENST00000449261 VPS8Q8N3P4 1428 aa15.13■□□□□ 0.01
BRPF3-206ENST00000449261 ZBTB7CA1YPR0 619 aa15.13■□□□□ 0.01
BRPF3-206ENST00000449261 KNSTRNQ9Y448 316 aa15.12■□□□□ 0.01
BRPF3-206ENST00000449261 UPF2Q9HAU5 1272 aaKnown RBP15.12■□□□□ 0.01
BRPF3-206ENST00000449261 CARMIL2Q6F5E8 1435 aa15.11■□□□□ 0.01
BRPF3-206ENST00000449261 TOP2AP11388 1531 aaKnown RBP15.1■□□□□ 0.01
BRPF3-206ENST00000449261 ARXQ96QS3 562 aa15.1■□□□□ 0.01
BRPF3-206ENST00000449261 KANK4Q5T7N3 995 aaPredicted RBP15.1■□□□□ 0.01
BRPF3-206ENST00000449261 WIZO95785 1651 aa15.09■□□□□ 0.01
BRPF3-206ENST00000449261 A0A0U1RQG5 324 aaPredicted RBP15.09■□□□□ 0.01
BRPF3-206ENST00000449261 HSP90AA1P07900 732 aaKnown RBP15.08■□□□□ 0.01
BRPF3-206ENST00000449261 CFAP53Q96M91 514 aa15.08■□□□□ 0
BRPF3-206ENST00000449261 IRX6P78412 446 aaPredicted RBP15.08■□□□□ 0
BRPF3-206ENST00000449261 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0
BRPF3-206ENST00000449261 A0A0G2JS52 829 aa15.08■□□□□ 0
BRPF3-206ENST00000449261 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.07■□□□□ 0
BRPF3-206ENST00000449261 POGKQ9P215 609 aa15.07■□□□□ 0
BRPF3-206ENST00000449261 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
BRPF3-206ENST00000449261 PPM1GO15355 546 aaPredicted RBP15.05■□□□□ 0
BRPF3-206ENST00000449261 DCAF11Q8TEB1 546 aa15.05■□□□□ 0
BRPF3-206ENST00000449261 SENP3-EIF4A1A0A087X0R7 540 aa15.05■□□□□ -0
BRPF3-206ENST00000449261 MLECQ14165 292 aa15.05■□□□□ -0
BRPF3-206ENST00000449261 HOMEZQ8IX15 550 aa15.05■□□□□ -0
BRPF3-206ENST00000449261 ARHGAP35Q9NRY4 1499 aa15.03■□□□□ -0
BRPF3-206ENST00000449261 PDIA4P13667 645 aaKnown RBP15.03■□□□□ -0
BRPF3-206ENST00000449261 KANK1Q14678 1352 aa15.03■□□□□ -0
BRPF3-206ENST00000449261 FMN1Q68DA7 1419 aa15.03■□□□□ -0
BRPF3-206ENST00000449261 DEKP35659 375 aaKnown RBP15.03■□□□□ -0
BRPF3-206ENST00000449261 GGT6Q6P531 493 aa15.01□□□□□ -0.01
BRPF3-206ENST00000449261 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
BRPF3-206ENST00000449261 EFCAB2Q5VUJ9 269 aa15□□□□□ -0.01
BRPF3-206ENST00000449261 TIMELESSQ9UNS1 1208 aa15□□□□□ -0.01
BRPF3-206ENST00000449261 HAP1P54257 671 aaPredicted RBP15□□□□□ -0.01
BRPF3-206ENST00000449261 NCLP19338 710 aaKnown RBP15□□□□□ -0.01
BRPF3-206ENST00000449261 MYH16Q9H6N6 1097 aa14.99□□□□□ -0.01
BRPF3-206ENST00000449261 PKD2Q13563 968 aa14.99□□□□□ -0.01
BRPF3-206ENST00000449261 VSIG10Q8N0Z9 540 aa14.98□□□□□ -0.01
BRPF3-206ENST00000449261 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
BRPF3-206ENST00000449261 NEUROD2Q15784 382 aa14.96□□□□□ -0.01
BRPF3-206ENST00000449261 LMOD2Q6P5Q4 547 aa14.96□□□□□ -0.01
BRPF3-206ENST00000449261 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
BRPF3-206ENST00000449261 TMF1P82094 1093 aa14.95□□□□□ -0.02
BRPF3-206ENST00000449261 JPH4Q96JJ6 628 aa14.95□□□□□ -0.02
BRPF3-206ENST00000449261 NUDCQ9Y266 331 aa14.95□□□□□ -0.02
BRPF3-206ENST00000449261 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
BRPF3-206ENST00000449261 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
BRPF3-206ENST00000449261 FOXD1Q16676 465 aa14.95□□□□□ -0.02
BRPF3-206ENST00000449261 FHOD3Q2V2M9 1422 aa14.94□□□□□ -0.02
BRPF3-206ENST00000449261 HDGFP51858 240 aaKnown RBP14.93□□□□□ -0.02
BRPF3-206ENST00000449261 CC2D1BQ5T0F9 858 aaKnown RBP14.93□□□□□ -0.02
BRPF3-206ENST00000449261 MAPK8IP3Q9UPT6 1336 aa14.93□□□□□ -0.02
BRPF3-206ENST00000449261 NUP155O75694 1391 aa14.91□□□□□ -0.02
BRPF3-206ENST00000449261 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
BRPF3-206ENST00000449261 MPHOSPH9Q99550 1183 aa14.9□□□□□ -0.02
BRPF3-206ENST00000449261 ANKRD30AQ9BXX3 1397 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms