RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 KIF13AQ9H1H9 1805 aa31.96■■■□□ 2.71
CHCHD3-203ENST00000448878 FAM69CQ0P6D2 419 aa31.93■■■□□ 2.7
CHCHD3-203ENST00000448878 RUSC2Q8N2Y8 1516 aa31.86■■■□□ 2.69
CHCHD3-203ENST00000448878 ABCC10Q5T3U5 1492 aa31.79■■■□□ 2.68
CHCHD3-203ENST00000448878 TTBK1Q5TCY1 1321 aaPredicted RBP31.74■■■□□ 2.67
CHCHD3-203ENST00000448878 ADCY10Q96PN6 1610 aa31.72■■■□□ 2.67
CHCHD3-203ENST00000448878 MAPKBP1O60336 1514 aa31.72■■■□□ 2.67
CHCHD3-203ENST00000448878 KIAA0586Q9BVV6 1533 aa31.71■■■□□ 2.67
CHCHD3-203ENST00000448878 IGF1RP08069 1367 aa31.7■■■□□ 2.67
CHCHD3-203ENST00000448878 KIF27Q86VH2 1401 aa31.69■■■□□ 2.66
CHCHD3-203ENST00000448878 DIP2BQ9P265 1576 aa31.68■■■□□ 2.66
CHCHD3-203ENST00000448878 CUL7Q14999 1698 aa31.61■■■□□ 2.65
CHCHD3-203ENST00000448878 TSPOAP1O95153 1857 aa31.6■■■□□ 2.65
CHCHD3-203ENST00000448878 KDM6BO15054 1643 aa31.58■■■□□ 2.65
CHCHD3-203ENST00000448878 PTPRGP23470 1445 aa31.58■■■□□ 2.65
CHCHD3-203ENST00000448878 CARMIL1Q5VZK9 1371 aa31.53■■■□□ 2.64
CHCHD3-203ENST00000448878 CARMIL2Q6F5E8 1435 aa31.49■■■□□ 2.63
CHCHD3-203ENST00000448878 KDM4FA0A1W2PPD8 638 aa31.46■■■□□ 2.63
CHCHD3-203ENST00000448878 TNIKQ9UKE5 1360 aa31.45■■■□□ 2.63
CHCHD3-203ENST00000448878 ABCC2Q92887 1545 aa31.38■■■□□ 2.61
CHCHD3-203ENST00000448878 IQGAP2Q13576 1575 aa31.36■■■□□ 2.61
CHCHD3-203ENST00000448878 ASXL2Q76L83 1435 aa31.36■■■□□ 2.61
CHCHD3-203ENST00000448878 PLB1Q6P1J6 1458 aa31.32■■■□□ 2.6
CHCHD3-203ENST00000448878 UACAQ9BZF9 1416 aa31.28■■■□□ 2.6
CHCHD3-203ENST00000448878 UHRF1BP1LA0JNW5 1464 aa31.24■■■□□ 2.59
CHCHD3-203ENST00000448878 GLI2P10070 1586 aa31.22■■■□□ 2.59
CHCHD3-203ENST00000448878 DISP1Q96F81 1524 aa31.21■■■□□ 2.59
CHCHD3-203ENST00000448878 PPRC1Q5VV67 1664 aaKnown RBP31.19■■■□□ 2.58
CHCHD3-203ENST00000448878 RAPGEF2Q9Y4G8 1499 aa31.17■■■□□ 2.58
CHCHD3-203ENST00000448878 EPRSP07814 1512 aaKnown RBP31.14■■■□□ 2.57
CHCHD3-203ENST00000448878 KDM5BQ9UGL1 1544 aa31.12■■■□□ 2.57
CHCHD3-203ENST00000448878 ADGRL1O94910 1474 aa31.1■■■□□ 2.57
CHCHD3-203ENST00000448878 ZCCHC11Q5TAX3 1644 aaKnown RBP31.09■■■□□ 2.57
CHCHD3-203ENST00000448878 UGGT2Q9NYU1 1516 aa31.09■■■□□ 2.57
CHCHD3-203ENST00000448878 TEX14Q8IWB6 1497 aa31.07■■■□□ 2.56
CHCHD3-203ENST00000448878 COL17A1Q9UMD9 1497 aaPredicted RBP31.07■■■□□ 2.56
CHCHD3-203ENST00000448878 KIAA0556O60303 1618 aa31.06■■■□□ 2.56
CHCHD3-203ENST00000448878 MAP3K4Q9Y6R4 1608 aa31.06■■■□□ 2.56
CHCHD3-203ENST00000448878 KCNH8Q96L42 1107 aa30.99■■■□□ 2.55
CHCHD3-203ENST00000448878 ILDR1Q86SU0 546 aaPredicted RBP30.97■■■□□ 2.55
CHCHD3-203ENST00000448878 WDR7Q9Y4E6 1490 aa30.95■■■□□ 2.55
CHCHD3-203ENST00000448878 CTTNBP2Q8WZ74 1663 aa30.9■■■□□ 2.54
CHCHD3-203ENST00000448878 GOLGA3Q08378 1498 aa30.89■■■□□ 2.53
CHCHD3-203ENST00000448878 CD109Q6YHK3 1445 aa30.88■■■□□ 2.53
CHCHD3-203ENST00000448878 FAM9AQ8IZU1 332 aaPredicted RBP30.83■■■□□ 2.53
CHCHD3-203ENST00000448878 ARID3CA6NKF2 412 aa30.81■■■□□ 2.52
CHCHD3-203ENST00000448878 ABCA8O94911 1581 aa30.79■■■□□ 2.52
CHCHD3-203ENST00000448878 HECW2Q9P2P5 1572 aa30.79■■■□□ 2.52
CHCHD3-203ENST00000448878 CFAP43Q8NDM7 1665 aa30.78■■■□□ 2.52
CHCHD3-203ENST00000448878 P3H3Q8IVL6 736 aa30.77■■■□□ 2.52
CHCHD3-203ENST00000448878 MAGI3Q5TCQ9 1506 aa30.77■■■□□ 2.52
CHCHD3-203ENST00000448878 PRXQ9BXM0 1461 aa30.67■■■□□ 2.5
CHCHD3-203ENST00000448878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.62■■■□□ 2.49
CHCHD3-203ENST00000448878 HNRNPUL2Q1KMD3 747 aaKnown RBP30.62■■■□□ 2.49
CHCHD3-203ENST00000448878 KIF21BO75037 1637 aa30.62■■■□□ 2.49
CHCHD3-203ENST00000448878 ATP10BO94823 1461 aa30.59■■■□□ 2.49
CHCHD3-203ENST00000448878 ARAP3Q8WWN8 1544 aa30.54■■■□□ 2.48
CHCHD3-203ENST00000448878 RANGAP1P46060 587 aaPredicted RBP30.53■■■□□ 2.48
CHCHD3-203ENST00000448878 RAPGEF3O95398 923 aa30.5■■■□□ 2.47
CHCHD3-203ENST00000448878 CSRNP3Q8WYN3 585 aa30.48■■■□□ 2.47
CHCHD3-203ENST00000448878 PHLDB1Q86UU1 1377 aa30.46■■■□□ 2.47
CHCHD3-203ENST00000448878 ABCA9Q8IUA7 1624 aa30.45■■■□□ 2.47
CHCHD3-203ENST00000448878 ARID4BQ4LE39 1312 aaPredicted RBP30.45■■■□□ 2.46
CHCHD3-203ENST00000448878 RAPGEF6Q8TEU7 1601 aa30.43■■■□□ 2.46
CHCHD3-203ENST00000448878 SAMD9Q5K651 1589 aa30.38■■■□□ 2.45
CHCHD3-203ENST00000448878 PTPRMP28827 1452 aa30.37■■■□□ 2.45
CHCHD3-203ENST00000448878 NEO1Q92859 1461 aa30.37■■■□□ 2.45
CHCHD3-203ENST00000448878 ADAMTSL3P82987 1691 aa30.33■■■□□ 2.45
CHCHD3-203ENST00000448878 PLEKHD1A6NEE1 506 aa30.32■■■□□ 2.44
CHCHD3-203ENST00000448878 NUP153P49790 1475 aaKnown RBP30.29■■■□□ 2.44
CHCHD3-203ENST00000448878 FHOD3Q2V2M9 1422 aa30.29■■■□□ 2.44
CHCHD3-203ENST00000448878 FBXO41Q8TF61 875 aa30.28■■■□□ 2.44
CHCHD3-203ENST00000448878 PLPPR3Q6T4P5 718 aa30.26■■■□□ 2.43
CHCHD3-203ENST00000448878 BCORL1Q5H9F3 1711 aa30.25■■■□□ 2.43
CHCHD3-203ENST00000448878 FRMPD1Q5SYB0 1578 aa30.24■■■□□ 2.43
CHCHD3-203ENST00000448878 MADDQ8WXG6 1647 aa30.22■■■□□ 2.43
CHCHD3-203ENST00000448878 DENND4BO75064 1496 aaPredicted RBP30.21■■■□□ 2.43
CHCHD3-203ENST00000448878 AKNAQ7Z591 1439 aa30.19■■■□□ 2.42
CHCHD3-203ENST00000448878 EEA1Q15075 1411 aa30.16■■■□□ 2.42
CHCHD3-203ENST00000448878 FANCAO15360 1455 aa30.16■■■□□ 2.42
CHCHD3-203ENST00000448878 PCF11O94913 1555 aaKnown RBP30.14■■■□□ 2.42
CHCHD3-203ENST00000448878 RIMS1Q86UR5 1692 aaKnown RBP30.13■■■□□ 2.41
CHCHD3-203ENST00000448878 ARHGEF40Q8TER5 1519 aa30.12■■■□□ 2.41
CHCHD3-203ENST00000448878 ATP1B4Q9UN42 357 aaPredicted RBP30.11■■■□□ 2.41
CHCHD3-203ENST00000448878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.11■■■□□ 2.412e-6■■■□□ 15.1
CHCHD3-203ENST00000448878 CFAP74Q9C0B2 1584 aa30.11■■■□□ 2.41
CHCHD3-203ENST00000448878 RICTORQ6R327 1708 aa30.1■■■□□ 2.41
CHCHD3-203ENST00000448878 MLECQ14165 292 aa30.1■■■□□ 2.41
CHCHD3-203ENST00000448878 EHMT2Q96KQ7 1210 aa30.1■■■□□ 2.41
CHCHD3-203ENST00000448878 LMTK3Q96Q04 1460 aa30.08■■■□□ 2.41
CHCHD3-203ENST00000448878 POGZQ7Z3K3 1410 aa30.08■■■□□ 2.41
CHCHD3-203ENST00000448878 HSPA2P54652 639 aa30.07■■■□□ 2.4
CHCHD3-203ENST00000448878 TTC37Q6PGP7 1564 aa30.05■■■□□ 2.4
CHCHD3-203ENST00000448878 EFCAB5A4FU69 1503 aa30.03■■■□□ 2.4
CHCHD3-203ENST00000448878 ZFYVE16Q7Z3T8 1539 aa30.02■■■□□ 2.4
CHCHD3-203ENST00000448878 YEATS2Q9ULM3 1422 aa30.02■■■□□ 2.4
CHCHD3-203ENST00000448878 CDK13Q14004 1512 aaKnown RBP30.01■■■□□ 2.4
CHCHD3-203ENST00000448878 SCAPERQ9BY12 1400 aa29.97■■■□□ 2.39
CHCHD3-203ENST00000448878 UBTFP17480 764 aaKnown RBP29.97■■■□□ 2.39
CHCHD3-203ENST00000448878 ZMYM4Q5VZL5 1548 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms