RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
HLA-F-221ENST00000444621 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
HLA-F-221ENST00000444621 DIP2BQ9P265 1576 aa19.07■□□□□ 0.64
HLA-F-221ENST00000444621 KDM4FA0A1W2PPD8 638 aa19.07■□□□□ 0.64
HLA-F-221ENST00000444621 NPM1P06748 294 aaKnown RBP eCLIP19.06■□□□□ 0.64
HLA-F-221ENST00000444621 MAPKBP1O60336 1514 aa19.05■□□□□ 0.64
HLA-F-221ENST00000444621 KDM6BO15054 1643 aa19.04■□□□□ 0.64
HLA-F-221ENST00000444621 TSPOAP1O95153 1857 aa19.03■□□□□ 0.64
HLA-F-221ENST00000444621 ADCY10Q96PN6 1610 aa19.02■□□□□ 0.64
HLA-F-221ENST00000444621 RUSC2Q8N2Y8 1516 aa19.01■□□□□ 0.63
HLA-F-221ENST00000444621 ILDR1Q86SU0 546 aaPredicted RBP19.01■□□□□ 0.63
HLA-F-221ENST00000444621 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
HLA-F-221ENST00000444621 KIAA0586Q9BVV6 1533 aa18.84■□□□□ 0.61
HLA-F-221ENST00000444621 PPRC1Q5VV67 1664 aaKnown RBP18.8■□□□□ 0.6
HLA-F-221ENST00000444621 ADGRL1O94910 1474 aa18.8■□□□□ 0.6
HLA-F-221ENST00000444621 TTBK1Q5TCY1 1321 aaPredicted RBP18.77■□□□□ 0.6
HLA-F-221ENST00000444621 PTPRGP23470 1445 aa18.77■□□□□ 0.6
HLA-F-221ENST00000444621 CUL7Q14999 1698 aa18.77■□□□□ 0.6
HLA-F-221ENST00000444621 IGF1RP08069 1367 aa18.77■□□□□ 0.6
HLA-F-221ENST00000444621 GLI2P10070 1586 aa18.74■□□□□ 0.59
HLA-F-221ENST00000444621 ABCC2Q92887 1545 aa18.74■□□□□ 0.59
HLA-F-221ENST00000444621 ASXL2Q76L83 1435 aa18.74■□□□□ 0.59
HLA-F-221ENST00000444621 PLB1Q6P1J6 1458 aa18.71■□□□□ 0.59
HLA-F-221ENST00000444621 HECW2Q9P2P5 1572 aa18.71■□□□□ 0.59
HLA-F-221ENST00000444621 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
HLA-F-221ENST00000444621 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
HLA-F-221ENST00000444621 COL17A1Q9UMD9 1497 aaPredicted RBP18.69■□□□□ 0.58
HLA-F-221ENST00000444621 CARMIL2Q6F5E8 1435 aa18.67■□□□□ 0.58
HLA-F-221ENST00000444621 MAP3K4Q9Y6R4 1608 aa18.65■□□□□ 0.58
HLA-F-221ENST00000444621 UHRF1BP1LA0JNW5 1464 aa18.64■□□□□ 0.57
HLA-F-221ENST00000444621 EPRSP07814 1512 aaKnown RBP18.62■□□□□ 0.57
HLA-F-221ENST00000444621 UACAQ9BZF9 1416 aa18.61■□□□□ 0.57
HLA-F-221ENST00000444621 IQGAP2Q13576 1575 aa18.6■□□□□ 0.57
HLA-F-221ENST00000444621 TEX14Q8IWB6 1497 aa18.59■□□□□ 0.57
HLA-F-221ENST00000444621 RAPGEF2Q9Y4G8 1499 aa18.58■□□□□ 0.56
HLA-F-221ENST00000444621 ZCCHC11Q5TAX3 1644 aaKnown RBP18.57■□□□□ 0.56
HLA-F-221ENST00000444621 KDM5BQ9UGL1 1544 aa18.56■□□□□ 0.56
HLA-F-221ENST00000444621 DISP1Q96F81 1524 aa18.55■□□□□ 0.56
HLA-F-221ENST00000444621 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.55
HLA-F-221ENST00000444621 UGGT2Q9NYU1 1516 aa18.46■□□□□ 0.55
HLA-F-221ENST00000444621 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
HLA-F-221ENST00000444621 EEA1Q15075 1411 aa18.46■□□□□ 0.55
HLA-F-221ENST00000444621 KIAA0556O60303 1618 aa18.45■□□□□ 0.54
HLA-F-221ENST00000444621 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
HLA-F-221ENST00000444621 FBXO41Q8TF61 875 aa18.44■□□□□ 0.54
HLA-F-221ENST00000444621 KIF21BO75037 1637 aa18.43■□□□□ 0.54
HLA-F-221ENST00000444621 CFAP43Q8NDM7 1665 aa18.42■□□□□ 0.54
HLA-F-221ENST00000444621 CD109Q6YHK3 1445 aa18.41■□□□□ 0.54
HLA-F-221ENST00000444621 MAGI3Q5TCQ9 1506 aa18.41■□□□□ 0.54
HLA-F-221ENST00000444621 CTTNBP2Q8WZ74 1663 aa18.4■□□□□ 0.54
HLA-F-221ENST00000444621 PRXQ9BXM0 1461 aa18.39■□□□□ 0.54
HLA-F-221ENST00000444621 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
HLA-F-221ENST00000444621 KCNH8Q96L42 1107 aa18.38■□□□□ 0.53
HLA-F-221ENST00000444621 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
HLA-F-221ENST00000444621 ABCA8O94911 1581 aa18.32■□□□□ 0.52
HLA-F-221ENST00000444621 ADAMTSL3P82987 1691 aa18.29■□□□□ 0.52
HLA-F-221ENST00000444621 PTPRMP28827 1452 aa18.28■□□□□ 0.52
HLA-F-221ENST00000444621 ARAP3Q8WWN8 1544 aa18.28■□□□□ 0.52
HLA-F-221ENST00000444621 BCORL1Q5H9F3 1711 aa18.2■□□□□ 0.5
HLA-F-221ENST00000444621 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
HLA-F-221ENST00000444621 PCF11O94913 1555 aaKnown RBP18.2■□□□□ 0.5
HLA-F-221ENST00000444621 ARID3CA6NKF2 412 aa18.19■□□□□ 0.5
HLA-F-221ENST00000444621 RANGAP1P46060 587 aaPredicted RBP18.19■□□□□ 0.5
HLA-F-221ENST00000444621 P3H3Q8IVL6 736 aa18.19■□□□□ 0.5
HLA-F-221ENST00000444621 MADDQ8WXG6 1647 aa18.19■□□□□ 0.5
HLA-F-221ENST00000444621 ABCA9Q8IUA7 1624 aa18.18■□□□□ 0.5
HLA-F-221ENST00000444621 RAPGEF3O95398 923 aa18.17■□□□□ 0.5
HLA-F-221ENST00000444621 LMTK3Q96Q04 1460 aa18.17■□□□□ 0.5
HLA-F-221ENST00000444621 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
HLA-F-221ENST00000444621 ATP10BO94823 1461 aa18.15■□□□□ 0.5
HLA-F-221ENST00000444621 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
HLA-F-221ENST00000444621 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
HLA-F-221ENST00000444621 FRMPD1Q5SYB0 1578 aa18.13■□□□□ 0.49
HLA-F-221ENST00000444621 RIMS1Q86UR5 1692 aaKnown RBP18.12■□□□□ 0.49
HLA-F-221ENST00000444621 NEO1Q92859 1461 aa18.11■□□□□ 0.49
HLA-F-221ENST00000444621 SAMD9Q5K651 1589 aa18.09■□□□□ 0.49
HLA-F-221ENST00000444621 HSPA2P54652 639 aa18.08■□□□□ 0.48
HLA-F-221ENST00000444621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
HLA-F-221ENST00000444621 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
HLA-F-221ENST00000444621 EFCAB5A4FU69 1503 aa18.06■□□□□ 0.48
HLA-F-221ENST00000444621 ARHGEF40Q8TER5 1519 aa18.05■□□□□ 0.48
HLA-F-221ENST00000444621 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
HLA-F-221ENST00000444621 RICTORQ6R327 1708 aa18.03■□□□□ 0.48
HLA-F-221ENST00000444621 RAPGEF6Q8TEU7 1601 aa18.03■□□□□ 0.48
HLA-F-221ENST00000444621 CERKQ8TCT0 537 aa18.03■□□□□ 0.48
HLA-F-221ENST00000444621 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
HLA-F-221ENST00000444621 DENND4BO75064 1496 aaPredicted RBP18■□□□□ 0.47
HLA-F-221ENST00000444621 SIGLEC1Q9BZZ2 1709 aa17.98■□□□□ 0.47
HLA-F-221ENST00000444621 FANCAO15360 1455 aa17.96■□□□□ 0.47
HLA-F-221ENST00000444621 POGZQ7Z3K3 1410 aa17.96■□□□□ 0.47
HLA-F-221ENST00000444621 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
HLA-F-221ENST00000444621 AKNAQ7Z591 1439 aa17.95■□□□□ 0.46
HLA-F-221ENST00000444621 FER1L4A9Z1Z3 1794 aa17.94■□□□□ 0.46
HLA-F-221ENST00000444621 ILDR2Q71H61 639 aa17.94■□□□□ 0.46
HLA-F-221ENST00000444621 FMN1Q68DA7 1419 aa17.94■□□□□ 0.46
HLA-F-221ENST00000444621 CFAP74Q9C0B2 1584 aa17.94■□□□□ 0.46
HLA-F-221ENST00000444621 NUP153P49790 1475 aaKnown RBP17.94■□□□□ 0.46
HLA-F-221ENST00000444621 PLEKHD1A6NEE1 506 aa17.93■□□□□ 0.46
HLA-F-221ENST00000444621 ZMYM4Q5VZL5 1548 aa17.93■□□□□ 0.46
HLA-F-221ENST00000444621 DISP3Q9P2K9 1392 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms