RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
RPSA-202ENST00000443003 TSPOAP1O95153 1857 aa13.41□□□□□ -0.26
RPSA-202ENST00000443003 DIP2BQ9P265 1576 aa13.4□□□□□ -0.26
RPSA-202ENST00000443003 ADCY10Q96PN6 1610 aa13.39□□□□□ -0.27
RPSA-202ENST00000443003 FAM69CQ0P6D2 419 aa13.37□□□□□ -0.27
RPSA-202ENST00000443003 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
RPSA-202ENST00000443003 KDM6BO15054 1643 aa13.36□□□□□ -0.27
RPSA-202ENST00000443003 MAPKBP1O60336 1514 aa13.36□□□□□ -0.27
RPSA-202ENST00000443003 JPH4Q96JJ6 628 aa13.36□□□□□ -0.27
RPSA-202ENST00000443003 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPSA-202ENST00000443003 CUL7Q14999 1698 aa13.28□□□□□ -0.28
RPSA-202ENST00000443003 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.29
RPSA-202ENST00000443003 KIAA0586Q9BVV6 1533 aa13.25□□□□□ -0.29
RPSA-202ENST00000443003 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
RPSA-202ENST00000443003 PPRC1Q5VV67 1664 aaKnown RBP13.21□□□□□ -0.3
RPSA-202ENST00000443003 KIF27Q86VH2 1401 aa13.21□□□□□ -0.3
RPSA-202ENST00000443003 PTPRGP23470 1445 aa13.19□□□□□ -0.3
RPSA-202ENST00000443003 IGF1RP08069 1367 aa13.18□□□□□ -0.3
RPSA-202ENST00000443003 IQGAP2Q13576 1575 aa13.17□□□□□ -0.3
RPSA-202ENST00000443003 ABCC2Q92887 1545 aa13.17□□□□□ -0.3
RPSA-202ENST00000443003 CARMIL2Q6F5E8 1435 aa13.15□□□□□ -0.3
RPSA-202ENST00000443003 ASXL2Q76L83 1435 aa13.15□□□□□ -0.3
RPSA-202ENST00000443003 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
RPSA-202ENST00000443003 TNIKQ9UKE5 1360 aa13.14□□□□□ -0.31
RPSA-202ENST00000443003 GLI2P10070 1586 aa13.14□□□□□ -0.31
RPSA-202ENST00000443003 PLB1Q6P1J6 1458 aa13.13□□□□□ -0.31
RPSA-202ENST00000443003 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
RPSA-202ENST00000443003 ZCCHC11Q5TAX3 1644 aaKnown RBP13.11□□□□□ -0.31
RPSA-202ENST00000443003 MAP3K4Q9Y6R4 1608 aa13.11□□□□□ -0.31
RPSA-202ENST00000443003 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
RPSA-202ENST00000443003 UHRF1BP1LA0JNW5 1464 aa13.09□□□□□ -0.31
RPSA-202ENST00000443003 UACAQ9BZF9 1416 aa13.08□□□□□ -0.32
RPSA-202ENST00000443003 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.32
RPSA-202ENST00000443003 DISP1Q96F81 1524 aa13.08□□□□□ -0.32
RPSA-202ENST00000443003 HECW2Q9P2P5 1572 aa13.07□□□□□ -0.32
RPSA-202ENST00000443003 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
RPSA-202ENST00000443003 COL17A1Q9UMD9 1497 aaPredicted RBP13.06□□□□□ -0.32
RPSA-202ENST00000443003 TEX14Q8IWB6 1497 aa13.05□□□□□ -0.32
RPSA-202ENST00000443003 KDM5BQ9UGL1 1544 aa13.04□□□□□ -0.32
RPSA-202ENST00000443003 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
RPSA-202ENST00000443003 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
RPSA-202ENST00000443003 CTTNBP2Q8WZ74 1663 aa13.02□□□□□ -0.32
RPSA-202ENST00000443003 WDR7Q9Y4E6 1490 aa13□□□□□ -0.33
RPSA-202ENST00000443003 RAPGEF2Q9Y4G8 1499 aa13□□□□□ -0.33
RPSA-202ENST00000443003 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
RPSA-202ENST00000443003 KIF21BO75037 1637 aa12.99□□□□□ -0.33
RPSA-202ENST00000443003 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
RPSA-202ENST00000443003 KCNH8Q96L42 1107 aa12.92□□□□□ -0.34
RPSA-202ENST00000443003 ABCA8O94911 1581 aa12.91□□□□□ -0.34
RPSA-202ENST00000443003 MAGI3Q5TCQ9 1506 aa12.91□□□□□ -0.34
RPSA-202ENST00000443003 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
RPSA-202ENST00000443003 ARID3CA6NKF2 412 aa12.87□□□□□ -0.35
RPSA-202ENST00000443003 ABCA9Q8IUA7 1624 aa12.81□□□□□ -0.36
RPSA-202ENST00000443003 ADAMTSL3P82987 1691 aa12.81□□□□□ -0.36
RPSA-202ENST00000443003 ARAP3Q8WWN8 1544 aa12.81□□□□□ -0.36
RPSA-202ENST00000443003 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
RPSA-202ENST00000443003 MADDQ8WXG6 1647 aa12.8□□□□□ -0.36
RPSA-202ENST00000443003 PTPRMP28827 1452 aa12.79□□□□□ -0.36
RPSA-202ENST00000443003 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
RPSA-202ENST00000443003 BCORL1Q5H9F3 1711 aa12.79□□□□□ -0.36
RPSA-202ENST00000443003 ATP10BO94823 1461 aa12.78□□□□□ -0.36
RPSA-202ENST00000443003 PRXQ9BXM0 1461 aa12.78□□□□□ -0.36
RPSA-202ENST00000443003 RAPGEF6Q8TEU7 1601 aa12.77□□□□□ -0.36
RPSA-202ENST00000443003 RIMS1Q86UR5 1692 aaKnown RBP12.77□□□□□ -0.36
RPSA-202ENST00000443003 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.37
RPSA-202ENST00000443003 FAM9AQ8IZU1 332 aaPredicted RBP12.76□□□□□ -0.37
RPSA-202ENST00000443003 PCF11O94913 1555 aaKnown RBP12.75□□□□□ -0.37
RPSA-202ENST00000443003 RAPGEF3O95398 923 aa12.75□□□□□ -0.37
RPSA-202ENST00000443003 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
RPSA-202ENST00000443003 FBXO41Q8TF61 875 aa12.75□□□□□ -0.37
RPSA-202ENST00000443003 ARID4BQ4LE39 1312 aaPredicted RBP12.74□□□□□ -0.37
RPSA-202ENST00000443003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
RPSA-202ENST00000443003 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
RPSA-202ENST00000443003 NEO1Q92859 1461 aa12.73□□□□□ -0.37
RPSA-202ENST00000443003 ARHGEF40Q8TER5 1519 aa12.72□□□□□ -0.37
RPSA-202ENST00000443003 RICTORQ6R327 1708 aa12.71□□□□□ -0.37
RPSA-202ENST00000443003 LMTK3Q96Q04 1460 aa12.71□□□□□ -0.38
RPSA-202ENST00000443003 PHLDB1Q86UU1 1377 aa12.7□□□□□ -0.38
RPSA-202ENST00000443003 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
RPSA-202ENST00000443003 RANGAP1P46060 587 aaPredicted RBP12.69□□□□□ -0.38
RPSA-202ENST00000443003 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
RPSA-202ENST00000443003 NUP153P49790 1475 aaKnown RBP12.68□□□□□ -0.38
RPSA-202ENST00000443003 SIGLEC1Q9BZZ2 1709 aa12.67□□□□□ -0.38
RPSA-202ENST00000443003 FER1L4A9Z1Z3 1794 aa12.66□□□□□ -0.38
RPSA-202ENST00000443003 TTC37Q6PGP7 1564 aa12.66□□□□□ -0.38
RPSA-202ENST00000443003 FHOD3Q2V2M9 1422 aa12.66□□□□□ -0.38
RPSA-202ENST00000443003 DENND4BO75064 1496 aaPredicted RBP12.65□□□□□ -0.38
RPSA-202ENST00000443003 FANCAO15360 1455 aa12.64□□□□□ -0.39
RPSA-202ENST00000443003 ZFYVE16Q7Z3T8 1539 aa12.63□□□□□ -0.39
RPSA-202ENST00000443003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.63□□□□□ -0.39not detected■■□□□ 12.4
RPSA-202ENST00000443003 HSPA2P54652 639 aa12.63□□□□□ -0.39
RPSA-202ENST00000443003 AKNAQ7Z591 1439 aa12.62□□□□□ -0.39
RPSA-202ENST00000443003 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
RPSA-202ENST00000443003 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
RPSA-202ENST00000443003 POGZQ7Z3K3 1410 aa12.61□□□□□ -0.39
RPSA-202ENST00000443003 HECW1Q76N89 1606 aa12.6□□□□□ -0.39
RPSA-202ENST00000443003 MLECQ14165 292 aa12.6□□□□□ -0.39
RPSA-202ENST00000443003 YEATS2Q9ULM3 1422 aa12.6□□□□□ -0.39
RPSA-202ENST00000443003 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
RPSA-202ENST00000443003 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms