RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 RUSC2Q8N2Y8 1516 aa36.34■■■■□ 3.41
TMEM50B-204ENST00000442441 NPM1P06748 294 aaKnown RBP eCLIP36.21■■■■□ 3.39
TMEM50B-204ENST00000442441 ABCC10Q5T3U5 1492 aa36.19■■■■□ 3.38
TMEM50B-204ENST00000442441 FAM69CQ0P6D2 419 aa36.19■■■■□ 3.38
TMEM50B-204ENST00000442441 MAPKBP1O60336 1514 aa36.16■■■■□ 3.38
TMEM50B-204ENST00000442441 KIAA0586Q9BVV6 1533 aa36.13■■■■□ 3.38
TMEM50B-204ENST00000442441 IGF1RP08069 1367 aa36.13■■■■□ 3.37
TMEM50B-204ENST00000442441 ADCY10Q96PN6 1610 aa36.12■■■■□ 3.37
TMEM50B-204ENST00000442441 KIF27Q86VH2 1401 aa36.08■■■■□ 3.37
TMEM50B-204ENST00000442441 DIP2BQ9P265 1576 aa36.07■■■■□ 3.37
TMEM50B-204ENST00000442441 CUL7Q14999 1698 aa36.05■■■■□ 3.36
TMEM50B-204ENST00000442441 PTPRGP23470 1445 aa35.89■■■■□ 3.34
TMEM50B-204ENST00000442441 CARMIL1Q5VZK9 1371 aa35.88■■■■□ 3.33
TMEM50B-204ENST00000442441 KDM6BO15054 1643 aa35.86■■■■□ 3.33
TMEM50B-204ENST00000442441 TSPOAP1O95153 1857 aa35.82■■■■□ 3.33
TMEM50B-204ENST00000442441 CARMIL2Q6F5E8 1435 aa35.8■■■■□ 3.32
TMEM50B-204ENST00000442441 TTBK1Q5TCY1 1321 aaPredicted RBP35.79■■■■□ 3.32
TMEM50B-204ENST00000442441 TNIKQ9UKE5 1360 aa35.78■■■■□ 3.32
TMEM50B-204ENST00000442441 ABCC2Q92887 1545 aa35.74■■■■□ 3.31
TMEM50B-204ENST00000442441 IQGAP2Q13576 1575 aa35.72■■■■□ 3.31
TMEM50B-204ENST00000442441 KDM4FA0A1W2PPD8 638 aa35.7■■■■□ 3.31
TMEM50B-204ENST00000442441 ASXL2Q76L83 1435 aa35.66■■■■□ 3.3
TMEM50B-204ENST00000442441 PLB1Q6P1J6 1458 aa35.65■■■■□ 3.3
TMEM50B-204ENST00000442441 UHRF1BP1LA0JNW5 1464 aa35.64■■■■□ 3.3
TMEM50B-204ENST00000442441 GLI2P10070 1586 aa35.6■■■■□ 3.29
TMEM50B-204ENST00000442441 UACAQ9BZF9 1416 aa35.59■■■■□ 3.29
TMEM50B-204ENST00000442441 DISP1Q96F81 1524 aa35.59■■■■□ 3.29
TMEM50B-204ENST00000442441 PPRC1Q5VV67 1664 aaKnown RBP35.55■■■■□ 3.28
TMEM50B-204ENST00000442441 RAPGEF2Q9Y4G8 1499 aa35.5■■■■□ 3.27
TMEM50B-204ENST00000442441 UGGT2Q9NYU1 1516 aa35.48■■■■□ 3.27
TMEM50B-204ENST00000442441 KDM5BQ9UGL1 1544 aa35.47■■■■□ 3.27
TMEM50B-204ENST00000442441 EPRSP07814 1512 aaKnown RBP35.44■■■■□ 3.26
TMEM50B-204ENST00000442441 KIAA0556O60303 1618 aa35.39■■■■□ 3.26
TMEM50B-204ENST00000442441 ZCCHC11Q5TAX3 1644 aaKnown RBP35.38■■■■□ 3.25
TMEM50B-204ENST00000442441 MAP3K4Q9Y6R4 1608 aa35.38■■■■□ 3.25
TMEM50B-204ENST00000442441 COL17A1Q9UMD9 1497 aaPredicted RBP35.36■■■■□ 3.25
TMEM50B-204ENST00000442441 TEX14Q8IWB6 1497 aa35.33■■■■□ 3.25
TMEM50B-204ENST00000442441 ADGRL1O94910 1474 aa35.31■■■■□ 3.24
TMEM50B-204ENST00000442441 WDR7Q9Y4E6 1490 aa35.24■■■■□ 3.23
TMEM50B-204ENST00000442441 CTTNBP2Q8WZ74 1663 aa35.2■■■■□ 3.23
TMEM50B-204ENST00000442441 GOLGA3Q08378 1498 aa35.17■■■■□ 3.22
TMEM50B-204ENST00000442441 ABCA8O94911 1581 aa35.1■■■■□ 3.21
TMEM50B-204ENST00000442441 CD109Q6YHK3 1445 aa35.08■■■■□ 3.21
TMEM50B-204ENST00000442441 MAGI3Q5TCQ9 1506 aa35.07■■■■□ 3.21
TMEM50B-204ENST00000442441 KCNH8Q96L42 1107 aa35.07■■■■□ 3.2
TMEM50B-204ENST00000442441 CFAP43Q8NDM7 1665 aa35.05■■■■□ 3.2
TMEM50B-204ENST00000442441 PRXQ9BXM0 1461 aa35.03■■■■□ 3.2
TMEM50B-204ENST00000442441 ILDR1Q86SU0 546 aaPredicted RBP35.01■■■■□ 3.2
TMEM50B-204ENST00000442441 HECW2Q9P2P5 1572 aa34.95■■■■□ 3.18
TMEM50B-204ENST00000442441 FAM9AQ8IZU1 332 aaPredicted RBP34.88■■■■□ 3.17
TMEM50B-204ENST00000442441 ARID3CA6NKF2 412 aa34.83■■■■□ 3.17
TMEM50B-204ENST00000442441 P3H3Q8IVL6 736 aa34.82■■■■□ 3.16
TMEM50B-204ENST00000442441 ATP10BO94823 1461 aa34.82■■■■□ 3.16
TMEM50B-204ENST00000442441 ARAP3Q8WWN8 1544 aa34.81■■■■□ 3.16
TMEM50B-204ENST00000442441 KIF21BO75037 1637 aa34.77■■■■□ 3.16
TMEM50B-204ENST00000442441 ABCA9Q8IUA7 1624 aa34.72■■■■□ 3.15
TMEM50B-204ENST00000442441 PHLDB1Q86UU1 1377 aa34.72■■■■□ 3.15
TMEM50B-204ENST00000442441 SAMD9Q5K651 1589 aa34.7■■■■□ 3.14
TMEM50B-204ENST00000442441 CSRNP3Q8WYN3 585 aa34.68■■■■□ 3.14
TMEM50B-204ENST00000442441 RAPGEF6Q8TEU7 1601 aa34.64■■■■□ 3.14
TMEM50B-204ENST00000442441 NEO1Q92859 1461 aa34.6■■■■□ 3.13
TMEM50B-204ENST00000442441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.59■■■■□ 3.13
TMEM50B-204ENST00000442441 RAPGEF3O95398 923 aa34.59■■■■□ 3.13
TMEM50B-204ENST00000442441 HNRNPUL2Q1KMD3 747 aaKnown RBP34.59■■■■□ 3.13
TMEM50B-204ENST00000442441 NUP153P49790 1475 aaKnown RBP34.53■■■■□ 3.12
TMEM50B-204ENST00000442441 ADAMTSL3P82987 1691 aa34.53■■■■□ 3.12
TMEM50B-204ENST00000442441 PTPRMP28827 1452 aa34.52■■■■□ 3.12
TMEM50B-204ENST00000442441 RANGAP1P46060 587 aaPredicted RBP34.47■■■■□ 3.11
TMEM50B-204ENST00000442441 FRMPD1Q5SYB0 1578 aa34.47■■■■□ 3.11
TMEM50B-204ENST00000442441 FHOD3Q2V2M9 1422 aa34.45■■■■□ 3.11
TMEM50B-204ENST00000442441 EEA1Q15075 1411 aa34.44■■■■□ 3.1
TMEM50B-204ENST00000442441 BCORL1Q5H9F3 1711 aa34.41■■■■□ 3.1
TMEM50B-204ENST00000442441 ARID4BQ4LE39 1312 aaPredicted RBP34.41■■■■□ 3.1
TMEM50B-204ENST00000442441 PLEKHD1A6NEE1 506 aa34.41■■■■□ 3.1
TMEM50B-204ENST00000442441 DENND4BO75064 1496 aaPredicted RBP34.35■■■■□ 3.09
TMEM50B-204ENST00000442441 MADDQ8WXG6 1647 aa34.35■■■■□ 3.09
TMEM50B-204ENST00000442441 AKNAQ7Z591 1439 aa34.32■■■■□ 3.08
TMEM50B-204ENST00000442441 ARHGEF40Q8TER5 1519 aa34.32■■■■□ 3.08
TMEM50B-204ENST00000442441 RICTORQ6R327 1708 aa34.3■■■■□ 3.08
TMEM50B-204ENST00000442441 FBXO41Q8TF61 875 aa34.3■■■■□ 3.08
TMEM50B-204ENST00000442441 FANCAO15360 1455 aa34.3■■■■□ 3.08
TMEM50B-204ENST00000442441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.29■■■■□ 3.08
TMEM50B-204ENST00000442441 EFCAB5A4FU69 1503 aa34.28■■■■□ 3.08
TMEM50B-204ENST00000442441 CFAP74Q9C0B2 1584 aa34.28■■■■□ 3.08
TMEM50B-204ENST00000442441 PCF11O94913 1555 aaKnown RBP34.26■■■■□ 3.07
TMEM50B-204ENST00000442441 TTC37Q6PGP7 1564 aa34.23■■■■□ 3.07
TMEM50B-204ENST00000442441 LMTK3Q96Q04 1460 aa34.22■■■■□ 3.07
TMEM50B-204ENST00000442441 RIMS1Q86UR5 1692 aaKnown RBP34.21■■■■□ 3.07
TMEM50B-204ENST00000442441 ZMYM4Q5VZL5 1548 aa34.2■■■■□ 3.06
TMEM50B-204ENST00000442441 POGZQ7Z3K3 1410 aa34.16■■■■□ 3.06
TMEM50B-204ENST00000442441 ZFYVE16Q7Z3T8 1539 aa34.15■■■■□ 3.06
TMEM50B-204ENST00000442441 CDK13Q14004 1512 aaKnown RBP34.14■■■■□ 3.06
TMEM50B-204ENST00000442441 YEATS2Q9ULM3 1422 aa34.13■■■■□ 3.05
TMEM50B-204ENST00000442441 MAGI2Q86UL8 1455 aa34.13■■■■□ 3.05
TMEM50B-204ENST00000442441 SIGLEC1Q9BZZ2 1709 aa34.08■■■■□ 3.05
TMEM50B-204ENST00000442441 PLCH2O75038 1416 aa34.08■■■■□ 3.05
TMEM50B-204ENST00000442441 HECW1Q76N89 1606 aa34.07■■■■□ 3.04
TMEM50B-204ENST00000442441 SCAPERQ9BY12 1400 aa34.06■■■■□ 3.04
TMEM50B-204ENST00000442441 PLPPR3Q6T4P5 718 aa34.05■■■■□ 3.04
TMEM50B-204ENST00000442441 HSPA2P54652 639 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms