RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 CCNB3Q8WWL7 1395 aa17.33■□□□□ 0.36
BRPF3-203ENST00000441123 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
BRPF3-203ENST00000441123 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
BRPF3-203ENST00000441123 CCDC136Q96JN2 1154 aa17.29■□□□□ 0.36
BRPF3-203ENST00000441123 ABCC8Q09428 1581 aa17.27■□□□□ 0.36
BRPF3-203ENST00000441123 RRP7BPQ9NSQ0 103 aa17.27■□□□□ 0.36
BRPF3-203ENST00000441123 WIZO95785 1651 aa17.26■□□□□ 0.35
BRPF3-203ENST00000441123 NPM1P06748 294 aaKnown RBP eCLIP17.26■□□□□ 0.35
BRPF3-203ENST00000441123 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
BRPF3-203ENST00000441123 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.35
BRPF3-203ENST00000441123 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
BRPF3-203ENST00000441123 NPM2Q86SE8 214 aaKnown RBP17.25■□□□□ 0.35
BRPF3-203ENST00000441123 CUX2O14529 1486 aa17.24■□□□□ 0.35
BRPF3-203ENST00000441123 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
BRPF3-203ENST00000441123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.347e-7■□□□□ 9.8
BRPF3-203ENST00000441123 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
BRPF3-203ENST00000441123 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
BRPF3-203ENST00000441123 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
BRPF3-203ENST00000441123 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
BRPF3-203ENST00000441123 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
BRPF3-203ENST00000441123 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
BRPF3-203ENST00000441123 CFDP1Q9UEE9 299 aaPredicted RBP17.16■□□□□ 0.34
BRPF3-203ENST00000441123 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
BRPF3-203ENST00000441123 CDCA8Q53HL2 280 aa17.15■□□□□ 0.34
BRPF3-203ENST00000441123 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
BRPF3-203ENST00000441123 HIRIP3Q9BW71 556 aaPredicted RBP17.14■□□□□ 0.33
BRPF3-203ENST00000441123 CCER2I3L3R5 266 aa17.12■□□□□ 0.33
BRPF3-203ENST00000441123 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
BRPF3-203ENST00000441123 DDRGK1Q96HY6 314 aa17.09■□□□□ 0.33
BRPF3-203ENST00000441123 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
BRPF3-203ENST00000441123 SALL2Q9Y467 1007 aaPredicted RBP17.07■□□□□ 0.32
BRPF3-203ENST00000441123 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
BRPF3-203ENST00000441123 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
BRPF3-203ENST00000441123 HSP90AA1P07900 732 aaKnown RBP17.05■□□□□ 0.32
BRPF3-203ENST00000441123 CARD11Q9BXL7 1154 aa17.04■□□□□ 0.32
BRPF3-203ENST00000441123 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
BRPF3-203ENST00000441123 PPP4R2Q9NY27 417 aa17.03■□□□□ 0.32
BRPF3-203ENST00000441123 IRX6P78412 446 aaPredicted RBP17.02■□□□□ 0.31
BRPF3-203ENST00000441123 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
BRPF3-203ENST00000441123 SUPT16HQ9Y5B9 1047 aaKnown RBP17■□□□□ 0.31
BRPF3-203ENST00000441123 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
BRPF3-203ENST00000441123 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
BRPF3-203ENST00000441123 KNSTRNQ9Y448 316 aa16.99■□□□□ 0.31
BRPF3-203ENST00000441123 RAB3GAP2Q9H2M9 1393 aa16.98■□□□□ 0.31
BRPF3-203ENST00000441123 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
BRPF3-203ENST00000441123 KANK4Q5T7N3 995 aaPredicted RBP16.97■□□□□ 0.31
BRPF3-203ENST00000441123 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
BRPF3-203ENST00000441123 ANP32EQ9BTT0 268 aa16.96■□□□□ 0.31
BRPF3-203ENST00000441123 BECN1Q14457 450 aa16.95■□□□□ 0.3
BRPF3-203ENST00000441123 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
BRPF3-203ENST00000441123 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
BRPF3-203ENST00000441123 EIF5BO60841 1220 aaKnown RBP16.93■□□□□ 0.3
BRPF3-203ENST00000441123 NBR1Q14596 966 aa16.93■□□□□ 0.3
BRPF3-203ENST00000441123 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
BRPF3-203ENST00000441123 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
BRPF3-203ENST00000441123 RGL3Q3MIN7 710 aa16.91■□□□□ 0.3
BRPF3-203ENST00000441123 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
BRPF3-203ENST00000441123 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
BRPF3-203ENST00000441123 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
BRPF3-203ENST00000441123 TMF1P82094 1093 aa16.86■□□□□ 0.29
BRPF3-203ENST00000441123 KANK1Q14678 1352 aa16.86■□□□□ 0.29
BRPF3-203ENST00000441123 PPP1R15AO75807 674 aaPredicted RBP16.83■□□□□ 0.28
BRPF3-203ENST00000441123 CCDC18Q5T9S5 1454 aa16.82■□□□□ 0.28
BRPF3-203ENST00000441123 DHX57Q6P158 1386 aaKnown RBP16.81■□□□□ 0.28
BRPF3-203ENST00000441123 ANKRD30AQ9BXX3 1397 aa16.81■□□□□ 0.28
BRPF3-203ENST00000441123 MS4A1P11836 297 aa16.81■□□□□ 0.28
BRPF3-203ENST00000441123 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
BRPF3-203ENST00000441123 CHMP4BQ9H444 224 aaKnown RBP16.8■□□□□ 0.28
BRPF3-203ENST00000441123 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
BRPF3-203ENST00000441123 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
BRPF3-203ENST00000441123 RUSC2Q8N2Y8 1516 aa16.78■□□□□ 0.28
BRPF3-203ENST00000441123 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
BRPF3-203ENST00000441123 KIF21BO75037 1637 aa16.77■□□□□ 0.28
BRPF3-203ENST00000441123 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.28
BRPF3-203ENST00000441123 PNNQ9H307 717 aaKnown RBP16.77■□□□□ 0.28
BRPF3-203ENST00000441123 RALBP1Q15311 655 aa16.77■□□□□ 0.27
BRPF3-203ENST00000441123 NOP58Q9Y2X3 529 aaKnown RBP16.77■□□□□ 0.27
BRPF3-203ENST00000441123 GLIPR1L2Q4G1C9 344 aa16.76■□□□□ 0.27
BRPF3-203ENST00000441123 MAPK8IP3Q9UPT6 1336 aa16.75■□□□□ 0.27
BRPF3-203ENST00000441123 PKD2Q13563 968 aa16.75■□□□□ 0.27
BRPF3-203ENST00000441123 ROCK2O75116 1388 aaKnown RBP16.75■□□□□ 0.27
BRPF3-203ENST00000441123 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
BRPF3-203ENST00000441123 FTSJ3Q8IY81 847 aaKnown RBP16.74■□□□□ 0.27
BRPF3-203ENST00000441123 GOLGA6L22H0YM25 854 aa16.74■□□□□ 0.27
BRPF3-203ENST00000441123 CC2D1BQ5T0F9 858 aaKnown RBP16.71■□□□□ 0.27
BRPF3-203ENST00000441123 RSPH4AQ5TD94 716 aa16.71■□□□□ 0.27
BRPF3-203ENST00000441123 CASC1Q6TDU7 716 aa16.71■□□□□ 0.27
BRPF3-203ENST00000441123 FANCD2Q9BXW9 1451 aa16.7■□□□□ 0.26
BRPF3-203ENST00000441123 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
BRPF3-203ENST00000441123 ARID4BQ4LE39 1312 aaPredicted RBP16.69■□□□□ 0.26
BRPF3-203ENST00000441123 CUX1P39880 1505 aa16.68■□□□□ 0.26
BRPF3-203ENST00000441123 NUP155O75694 1391 aa16.68■□□□□ 0.26
BRPF3-203ENST00000441123 B4GALNT3Q6L9W6 998 aa16.67■□□□□ 0.26
BRPF3-203ENST00000441123 EIF3AQ14152 1382 aaKnown RBP16.66■□□□□ 0.26
BRPF3-203ENST00000441123 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
BRPF3-203ENST00000441123 POGKQ9P215 609 aa16.65■□□□□ 0.26
BRPF3-203ENST00000441123 RBM19Q9Y4C8 960 aaKnown RBP16.64■□□□□ 0.25
BRPF3-203ENST00000441123 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
BRPF3-203ENST00000441123 A0A0G2JS52 829 aa16.62■□□□□ 0.25
BRPF3-203ENST00000441123 NCAPD3P42695 1498 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms