RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 JPH4Q96JJ6 628 aa24.04■■□□□ 1.44
FAM3A-213ENST00000440318 DIP2BQ9P265 1576 aa24.02■■□□□ 1.44
FAM3A-213ENST00000440318 MAPKBP1O60336 1514 aa24.01■■□□□ 1.43
FAM3A-213ENST00000440318 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
FAM3A-213ENST00000440318 KDM4FA0A1W2PPD8 638 aa23.98■■□□□ 1.43
FAM3A-213ENST00000440318 ADCY10Q96PN6 1610 aa23.97■■□□□ 1.43
FAM3A-213ENST00000440318 KDM6BO15054 1643 aa23.93■■□□□ 1.42
FAM3A-213ENST00000440318 NPM1P06748 294 aaKnown RBP eCLIP23.93■■□□□ 1.42
FAM3A-213ENST00000440318 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
FAM3A-213ENST00000440318 TSPOAP1O95153 1857 aa23.86■■□□□ 1.41
FAM3A-213ENST00000440318 ILDR1Q86SU0 546 aaPredicted RBP23.82■■□□□ 1.4
FAM3A-213ENST00000440318 KIAA0586Q9BVV6 1533 aa23.77■■□□□ 1.4
FAM3A-213ENST00000440318 PPRC1Q5VV67 1664 aaKnown RBP23.67■■□□□ 1.38
FAM3A-213ENST00000440318 IGF1RP08069 1367 aa23.66■■□□□ 1.38
FAM3A-213ENST00000440318 PTPRGP23470 1445 aa23.66■■□□□ 1.38
FAM3A-213ENST00000440318 ADGRL1O94910 1474 aa23.64■■□□□ 1.38
FAM3A-213ENST00000440318 CUL7Q14999 1698 aa23.64■■□□□ 1.37
FAM3A-213ENST00000440318 ABCC2Q92887 1545 aa23.63■■□□□ 1.37
FAM3A-213ENST00000440318 TTBK1Q5TCY1 1321 aaPredicted RBP23.62■■□□□ 1.37
FAM3A-213ENST00000440318 ASXL2Q76L83 1435 aa23.61■■□□□ 1.37
FAM3A-213ENST00000440318 GLI2P10070 1586 aa23.61■■□□□ 1.37
FAM3A-213ENST00000440318 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
FAM3A-213ENST00000440318 PLB1Q6P1J6 1458 aa23.56■■□□□ 1.36
FAM3A-213ENST00000440318 COL17A1Q9UMD9 1497 aaPredicted RBP23.56■■□□□ 1.36
FAM3A-213ENST00000440318 TNIKQ9UKE5 1360 aa23.56■■□□□ 1.36
FAM3A-213ENST00000440318 HECW2Q9P2P5 1572 aa23.52■■□□□ 1.36
FAM3A-213ENST00000440318 CARMIL2Q6F5E8 1435 aa23.51■■□□□ 1.35
FAM3A-213ENST00000440318 UHRF1BP1LA0JNW5 1464 aa23.51■■□□□ 1.35
FAM3A-213ENST00000440318 MAP3K4Q9Y6R4 1608 aa23.48■■□□□ 1.35
FAM3A-213ENST00000440318 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
FAM3A-213ENST00000440318 UACAQ9BZF9 1416 aa23.47■■□□□ 1.35
FAM3A-213ENST00000440318 EPRSP07814 1512 aaKnown RBP23.47■■□□□ 1.35
FAM3A-213ENST00000440318 IQGAP2Q13576 1575 aa23.47■■□□□ 1.35
FAM3A-213ENST00000440318 DISP1Q96F81 1524 aa23.43■■□□□ 1.34
FAM3A-213ENST00000440318 KDM5BQ9UGL1 1544 aa23.42■■□□□ 1.34
FAM3A-213ENST00000440318 TEX14Q8IWB6 1497 aa23.4■■□□□ 1.34
FAM3A-213ENST00000440318 ZCCHC11Q5TAX3 1644 aaKnown RBP23.39■■□□□ 1.33
FAM3A-213ENST00000440318 UGGT2Q9NYU1 1516 aa23.3■■□□□ 1.32
FAM3A-213ENST00000440318 KIAA0556O60303 1618 aa23.29■■□□□ 1.32
FAM3A-213ENST00000440318 WDR7Q9Y4E6 1490 aa23.28■■□□□ 1.32
FAM3A-213ENST00000440318 MAGI3Q5TCQ9 1506 aa23.2■■□□□ 1.3
FAM3A-213ENST00000440318 RAPGEF2Q9Y4G8 1499 aa23.2■■□□□ 1.3
FAM3A-213ENST00000440318 CD109Q6YHK3 1445 aa23.18■■□□□ 1.3
FAM3A-213ENST00000440318 CFAP43Q8NDM7 1665 aa23.18■■□□□ 1.3
FAM3A-213ENST00000440318 KIF21BO75037 1637 aa23.18■■□□□ 1.3
FAM3A-213ENST00000440318 KCNH8Q96L42 1107 aa23.13■■□□□ 1.29
FAM3A-213ENST00000440318 FBXO41Q8TF61 875 aa23.12■■□□□ 1.29
FAM3A-213ENST00000440318 ABCA8O94911 1581 aa23.11■■□□□ 1.29
FAM3A-213ENST00000440318 CTTNBP2Q8WZ74 1663 aa23.06■■□□□ 1.28
FAM3A-213ENST00000440318 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
FAM3A-213ENST00000440318 PTPRMP28827 1452 aa23.02■■□□□ 1.28
FAM3A-213ENST00000440318 GOLGA3Q08378 1498 aa23.02■■□□□ 1.28
FAM3A-213ENST00000440318 ADAMTSL3P82987 1691 aa23■■□□□ 1.27
FAM3A-213ENST00000440318 ARID3CA6NKF2 412 aa22.94■■□□□ 1.26
FAM3A-213ENST00000440318 ABCA9Q8IUA7 1624 aa22.91■■□□□ 1.26
FAM3A-213ENST00000440318 ATP10BO94823 1461 aa22.91■■□□□ 1.26
FAM3A-213ENST00000440318 PCF11O94913 1555 aaKnown RBP22.9■■□□□ 1.26
FAM3A-213ENST00000440318 BCORL1Q5H9F3 1711 aa22.89■■□□□ 1.26
FAM3A-213ENST00000440318 RAPGEF3O95398 923 aa22.89■■□□□ 1.25
FAM3A-213ENST00000440318 LMTK3Q96Q04 1460 aa22.89■■□□□ 1.25
FAM3A-213ENST00000440318 MADDQ8WXG6 1647 aa22.89■■□□□ 1.25
FAM3A-213ENST00000440318 FRMPD1Q5SYB0 1578 aa22.88■■□□□ 1.25
FAM3A-213ENST00000440318 PHLDB1Q86UU1 1377 aa22.87■■□□□ 1.25
FAM3A-213ENST00000440318 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
FAM3A-213ENST00000440318 NEO1Q92859 1461 aa22.83■■□□□ 1.25
FAM3A-213ENST00000440318 P3H3Q8IVL6 736 aa22.82■■□□□ 1.24
FAM3A-213ENST00000440318 ARID4BQ4LE39 1312 aaPredicted RBP22.8■■□□□ 1.24
FAM3A-213ENST00000440318 RIMS1Q86UR5 1692 aaKnown RBP22.78■■□□□ 1.24
FAM3A-213ENST00000440318 ARHGEF40Q8TER5 1519 aa22.76■■□□□ 1.23
FAM3A-213ENST00000440318 RAPGEF6Q8TEU7 1601 aa22.74■■□□□ 1.23
FAM3A-213ENST00000440318 HSPA2P54652 639 aa22.73■■□□□ 1.23
FAM3A-213ENST00000440318 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
FAM3A-213ENST00000440318 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
FAM3A-213ENST00000440318 RICTORQ6R327 1708 aa22.7■■□□□ 1.22
FAM3A-213ENST00000440318 SIGLEC1Q9BZZ2 1709 aa22.68■■□□□ 1.22
FAM3A-213ENST00000440318 NUP153P49790 1475 aaKnown RBP22.67■■□□□ 1.22
FAM3A-213ENST00000440318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.67■■□□□ 1.22
FAM3A-213ENST00000440318 HNRNPUL2Q1KMD3 747 aaKnown RBP22.67■■□□□ 1.22
FAM3A-213ENST00000440318 DENND4BO75064 1496 aaPredicted RBP22.66■■□□□ 1.22
FAM3A-213ENST00000440318 PLPPR3Q6T4P5 718 aa22.66■■□□□ 1.22
FAM3A-213ENST00000440318 FHOD3Q2V2M9 1422 aa22.64■■□□□ 1.21
FAM3A-213ENST00000440318 CERKQ8TCT0 537 aa22.63■■□□□ 1.21
FAM3A-213ENST00000440318 AKNAQ7Z591 1439 aa22.63■■□□□ 1.21
FAM3A-213ENST00000440318 ZMYM4Q5VZL5 1548 aa22.61■■□□□ 1.21
FAM3A-213ENST00000440318 FANCAO15360 1455 aa22.6■■□□□ 1.21
FAM3A-213ENST00000440318 YEATS2Q9ULM3 1422 aa22.6■■□□□ 1.21
FAM3A-213ENST00000440318 POGZQ7Z3K3 1410 aa22.58■■□□□ 1.21
FAM3A-213ENST00000440318 ZFYVE16Q7Z3T8 1539 aa22.58■■□□□ 1.21
FAM3A-213ENST00000440318 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.57■■□□□ 1.2
FAM3A-213ENST00000440318 CFAP74Q9C0B2 1584 aa22.57■■□□□ 1.2
FAM3A-213ENST00000440318 TTC37Q6PGP7 1564 aa22.56■■□□□ 1.2
FAM3A-213ENST00000440318 EFCAB5A4FU69 1503 aa22.55■■□□□ 1.2
FAM3A-213ENST00000440318 FER1L4A9Z1Z3 1794 aa22.54■■□□□ 1.2
FAM3A-213ENST00000440318 MLECQ14165 292 aa22.53■■□□□ 1.2
FAM3A-213ENST00000440318 PLEKHD1A6NEE1 506 aa22.52■■□□□ 1.2
FAM3A-213ENST00000440318 HECW1Q76N89 1606 aa22.52■■□□□ 1.2
FAM3A-213ENST00000440318 ILDR2Q71H61 639 aa22.51■■□□□ 1.19
FAM3A-213ENST00000440318 MAGI2Q86UL8 1455 aa22.5■■□□□ 1.19
FAM3A-213ENST00000440318 RANGAP1P46060 587 aaPredicted RBP22.5■■□□□ 1.19
FAM3A-213ENST00000440318 CSRNP3Q8WYN3 585 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms