RNA–Protein interactions for RNA: ENST00000440264.5

CCNA1-202, Transcript of cyclin A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCNA1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-202ENST00000440264 FHAD1B1AJZ9 1412 aa29.16■■■□□ 2.26
CCNA1-202ENST00000440264 EIF4G3O43432 1585 aaKnown RBP29.16■■■□□ 2.26
CCNA1-202ENST00000440264 EFCAB5A4FU69 1503 aa29.12■■■□□ 2.25
CCNA1-202ENST00000440264 HRCP23327 699 aa29.12■■■□□ 2.25
CCNA1-202ENST00000440264 SAMD9Q5K651 1589 aa29.05■■■□□ 2.24
CCNA1-202ENST00000440264 TTBK1Q5TCY1 1321 aaPredicted RBP29■■■□□ 2.23
CCNA1-202ENST00000440264 SNAPC4Q5SXM2 1469 aa28.99■■■□□ 2.23
CCNA1-202ENST00000440264 MAP3K1Q13233 1512 aa28.96■■■□□ 2.23
CCNA1-202ENST00000440264 FHOD3Q2V2M9 1422 aa28.95■■■□□ 2.23
CCNA1-202ENST00000440264 MAGI1Q96QZ7 1491 aaPredicted RBP28.93■■■□□ 2.22
CCNA1-202ENST00000440264 APLP2Q06481 763 aa28.93■■■□□ 2.22
CCNA1-202ENST00000440264 PCF11O94913 1555 aaKnown RBP28.93■■■□□ 2.22
CCNA1-202ENST00000440264 IQGAP2Q13576 1575 aa28.9■■■□□ 2.22
CCNA1-202ENST00000440264 KANK4Q5T7N3 995 aaPredicted RBP28.9■■■□□ 2.22
CCNA1-202ENST00000440264 TIAM1Q13009 1591 aa28.89■■■□□ 2.22
CCNA1-202ENST00000440264 GRIN2AQ12879 1464 aa28.88■■■□□ 2.21
CCNA1-202ENST00000440264 CFAP43Q8NDM7 1665 aa28.85■■■□□ 2.21
CCNA1-202ENST00000440264 FYCO1Q9BQS8 1478 aa28.84■■■□□ 2.21
CCNA1-202ENST00000440264 P3H3Q8IVL6 736 aa28.84■■■□□ 2.21
CCNA1-202ENST00000440264 CASKIN1Q8WXD9 1431 aa28.84■■■□□ 2.21
CCNA1-202ENST00000440264 SYNJ2O15056 1496 aa28.83■■■□□ 2.21
CCNA1-202ENST00000440264 UGGT2Q9NYU1 1516 aa28.81■■■□□ 2.2
CCNA1-202ENST00000440264 KIAA0586Q9BVV6 1533 aa28.8■■■□□ 2.2
CCNA1-202ENST00000440264 FMN1Q68DA7 1419 aa28.79■■■□□ 2.2
CCNA1-202ENST00000440264 CEP170Q5SW79 1584 aa28.74■■■□□ 2.19
CCNA1-202ENST00000440264 LRRC9Q6ZRR7 1453 aa28.74■■■□□ 2.19
CCNA1-202ENST00000440264 LRRIQ1Q96JM4 1722 aa28.72■■■□□ 2.19
CCNA1-202ENST00000440264 NUP160Q12769 1436 aa28.7■■■□□ 2.18
CCNA1-202ENST00000440264 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.18
CCNA1-202ENST00000440264 DISP1Q96F81 1524 aa28.67■■■□□ 2.18
CCNA1-202ENST00000440264 KIAA0556O60303 1618 aa28.64■■■□□ 2.17
CCNA1-202ENST00000440264 CHMP7Q8WUX9 453 aaPredicted RBP28.61■■■□□ 2.17
CCNA1-202ENST00000440264 PHLDB1Q86UU1 1377 aa28.51■■■□□ 2.16
CCNA1-202ENST00000440264 HECW1Q76N89 1606 aa28.5■■■□□ 2.15
CCNA1-202ENST00000440264 ZEB1P37275 1124 aaPredicted RBP28.5■■■□□ 2.15
CCNA1-202ENST00000440264 CCNB3Q8WWL7 1395 aa28.49■■■□□ 2.15
CCNA1-202ENST00000440264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.48■■■□□ 2.15
CCNA1-202ENST00000440264 CHD1O14646 1710 aa28.47■■■□□ 2.15
CCNA1-202ENST00000440264 CCDC18Q5T9S5 1454 aa28.46■■■□□ 2.15
CCNA1-202ENST00000440264 FBLN2P98095 1184 aa28.45■■■□□ 2.15
CCNA1-202ENST00000440264 HNRNPUL2Q1KMD3 747 aaKnown RBP28.45■■■□□ 2.15
CCNA1-202ENST00000440264 ATP1B4Q9UN42 357 aaPredicted RBP28.45■■■□□ 2.15
CCNA1-202ENST00000440264 MAGI3Q5TCQ9 1506 aa28.44■■■□□ 2.14
CCNA1-202ENST00000440264 EPRSP07814 1512 aaKnown RBP28.42■■■□□ 2.14
CCNA1-202ENST00000440264 EHBP1L1Q8N3D4 1523 aa28.39■■■□□ 2.14
CCNA1-202ENST00000440264 ARHGEF11O15085 1522 aa28.38■■■□□ 2.13
CCNA1-202ENST00000440264 JPH4Q96JJ6 628 aa28.38■■■□□ 2.13
CCNA1-202ENST00000440264 RAPGEF6Q8TEU7 1601 aa28.37■■■□□ 2.13
CCNA1-202ENST00000440264 NUP153P49790 1475 aaKnown RBP28.35■■■□□ 2.13
CCNA1-202ENST00000440264 CDK13Q14004 1512 aaKnown RBP28.34■■■□□ 2.13
CCNA1-202ENST00000440264 MTUS2Q5JR59 1369 aa28.33■■■□□ 2.13
CCNA1-202ENST00000440264 CCER1Q8TC90 406 aaPredicted RBP28.32■■■□□ 2.12
CCNA1-202ENST00000440264 SUPT6HQ7KZ85 1726 aaKnown RBP28.32■■■□□ 2.12
CCNA1-202ENST00000440264 NCOA2Q15596 1464 aa28.31■■■□□ 2.12
CCNA1-202ENST00000440264 CARMIL2Q6F5E8 1435 aa28.31■■■□□ 2.12
CCNA1-202ENST00000440264 SHROOM2Q13796 1616 aa28.31■■■□□ 2.12
CCNA1-202ENST00000440264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.3■■■□□ 2.12
CCNA1-202ENST00000440264 FGD6Q6ZV73 1430 aa28.26■■■□□ 2.11
CCNA1-202ENST00000440264 PLB1Q6P1J6 1458 aa28.25■■■□□ 2.11
CCNA1-202ENST00000440264 ABCA8O94911 1581 aa28.23■■■□□ 2.11
CCNA1-202ENST00000440264 MYOM3Q5VTT5 1437 aa28.21■■■□□ 2.11
CCNA1-202ENST00000440264 PRG4Q92954 1404 aaPredicted RBP28.2■■■□□ 2.1
CCNA1-202ENST00000440264 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
CCNA1-202ENST00000440264 TCOF1Q13428 1488 aaKnown RBP28.1■■■□□ 2.09
CCNA1-202ENST00000440264 PTPN23Q9H3S7 1636 aa28.09■■■□□ 2.09
CCNA1-202ENST00000440264 DHX57Q6P158 1386 aaKnown RBP28.08■■■□□ 2.09
CCNA1-202ENST00000440264 FAM50AQ14320 339 aaKnown RBP28.08■■■□□ 2.09
CCNA1-202ENST00000440264 ERCC6L2Q5T890 1561 aa28.07■■■□□ 2.08
CCNA1-202ENST00000440264 ARID3CA6NKF2 412 aa28.07■■■□□ 2.08
CCNA1-202ENST00000440264 ADCY10Q96PN6 1610 aa28.06■■■□□ 2.08
CCNA1-202ENST00000440264 ITGAEP38570 1179 aa28.05■■■□□ 2.08
CCNA1-202ENST00000440264 TROQ12816 1431 aaPredicted RBP28.04■■■□□ 2.08
CCNA1-202ENST00000440264 PTPRKQ15262 1439 aa28.04■■■□□ 2.08
CCNA1-202ENST00000440264 PTPRGP23470 1445 aa28.03■■■□□ 2.08
CCNA1-202ENST00000440264 MIA2Q96PC5 1412 aa28.03■■■□□ 2.08
CCNA1-202ENST00000440264 ATP10BO94823 1461 aa28.02■■■□□ 2.08
CCNA1-202ENST00000440264 RAB3GAP2Q9H2M9 1393 aa28.01■■■□□ 2.08
CCNA1-202ENST00000440264 SETD5Q9C0A6 1442 aa28.01■■■□□ 2.07
CCNA1-202ENST00000440264 KIF14Q15058 1648 aa27.96■■■□□ 2.07
CCNA1-202ENST00000440264 CLSPNQ9HAW4 1339 aa27.96■■■□□ 2.07
CCNA1-202ENST00000440264 CDK11AQ9UQ88 783 aaPredicted RBP27.96■■■□□ 2.07
CCNA1-202ENST00000440264 UACAQ9BZF9 1416 aa27.91■■■□□ 2.06
CCNA1-202ENST00000440264 HFM1A2PYH4 1435 aa27.89■■■□□ 2.06
CCNA1-202ENST00000440264 ABCC10Q5T3U5 1492 aa27.87■■■□□ 2.05
CCNA1-202ENST00000440264 ABCC2Q92887 1545 aa27.87■■■□□ 2.05
CCNA1-202ENST00000440264 GPATCH8Q9UKJ3 1502 aaKnown RBP27.86■■■□□ 2.05
CCNA1-202ENST00000440264 ITSN2Q9NZM3 1697 aa27.86■■■□□ 2.05
CCNA1-202ENST00000440264 MAPKBP1O60336 1514 aa27.85■■■□□ 2.05
CCNA1-202ENST00000440264 NAIPQ13075 1403 aa27.83■■■□□ 2.05
CCNA1-202ENST00000440264 AKNAQ7Z591 1439 aa27.81■■■□□ 2.04
CCNA1-202ENST00000440264 CDC42BPAQ5VT25 1732 aa27.8■■■□□ 2.04
CCNA1-202ENST00000440264 DNMT1P26358 1616 aaKnown RBP27.8■■■□□ 2.04
CCNA1-202ENST00000440264 UHRF1BP1LA0JNW5 1464 aa27.79■■■□□ 2.04
CCNA1-202ENST00000440264 GCC2Q8IWJ2 1684 aa27.79■■■□□ 2.04
CCNA1-202ENST00000440264 PLEKHD1A6NEE1 506 aa27.76■■■□□ 2.03
CCNA1-202ENST00000440264 DAPK1P53355 1430 aa27.75■■■□□ 2.03
CCNA1-202ENST00000440264 ABCC5O15440 1437 aa27.74■■■□□ 2.03
CCNA1-202ENST00000440264 ZNF644Q9H582 1327 aaPredicted RBP27.74■■■□□ 2.03
CCNA1-202ENST00000440264 CAMSAP2Q08AD1 1489 aa27.74■■■□□ 2.03
CCNA1-202ENST00000440264 KDM5BQ9UGL1 1544 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms