RNA–Protein interactions for RNA: ENST00000439673.6

TSC2-207, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,287 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-207ENST00000439673 ANP32EQ9BTT0 268 aa21.57■■□□□ 1.04
TSC2-207ENST00000439673 GOLGA3Q08378 1498 aa21.56■■□□□ 1.04
TSC2-207ENST00000439673 MYH16Q9H6N6 1097 aa21.56■■□□□ 1.04
TSC2-207ENST00000439673 CEP162Q5TB80 1403 aa21.55■■□□□ 1.04
TSC2-207ENST00000439673 RSF1Q96T23 1441 aaPredicted RBP21.53■■□□□ 1.04
TSC2-207ENST00000439673 ARXQ96QS3 562 aa21.52■■□□□ 1.04
TSC2-207ENST00000439673 MYO15BQ96JP2 1530 aa21.49■■□□□ 1.03
TSC2-207ENST00000439673 RRP7BPQ9NSQ0 103 aa21.49■■□□□ 1.03
TSC2-207ENST00000439673 CCDC180Q9P1Z9 1646 aa21.48■■□□□ 1.03
TSC2-207ENST00000439673 GOLGA6L22H0YM25 854 aa21.42■■□□□ 1.02
TSC2-207ENST00000439673 TNIKQ9UKE5 1360 aa21.42■■□□□ 1.02
TSC2-207ENST00000439673 PPM1GO15355 546 aaPredicted RBP21.41■■□□□ 1.02
TSC2-207ENST00000439673 TRIM44Q96DX7 344 aaPredicted RBP21.41■■□□□ 1.02
TSC2-207ENST00000439673 SUPT16HQ9Y5B9 1047 aaKnown RBP21.4■■□□□ 1.02
TSC2-207ENST00000439673 CDCA8Q53HL2 280 aa21.4■■□□□ 1.02
TSC2-207ENST00000439673 NCLP19338 710 aaKnown RBP21.38■■□□□ 1.01
TSC2-207ENST00000439673 PPP4R2Q9NY27 417 aa21.37■■□□□ 1.01
TSC2-207ENST00000439673 CHMP7Q8WUX9 453 aaPredicted RBP21.36■■□□□ 1.01
TSC2-207ENST00000439673 CFAP53Q96M91 514 aa21.35■■□□□ 1.01
TSC2-207ENST00000439673 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 1
TSC2-207ENST00000439673 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
TSC2-207ENST00000439673 KNSTRNQ9Y448 316 aa21.32■■□□□ 1
TSC2-207ENST00000439673 PLEKHD1A6NEE1 506 aa21.31■■□□□ 1
TSC2-207ENST00000439673 ERICH6BQ5W0A0 696 aa21.28■■□□□ 1
TSC2-207ENST00000439673 CARD11Q9BXL7 1154 aa21.27■■□□□ 1
TSC2-207ENST00000439673 RGL3Q3MIN7 710 aa21.26■□□□□ 0.99
TSC2-207ENST00000439673 KIF27Q86VH2 1401 aa21.25■□□□□ 0.99
TSC2-207ENST00000439673 CFDP1Q9UEE9 299 aaPredicted RBP21.23■□□□□ 0.99
TSC2-207ENST00000439673 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
TSC2-207ENST00000439673 TIMELESSQ9UNS1 1208 aa21.22■□□□□ 0.99
TSC2-207ENST00000439673 FTSJ3Q8IY81 847 aaKnown RBP21.21■□□□□ 0.99
TSC2-207ENST00000439673 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
TSC2-207ENST00000439673 CASC1Q6TDU7 716 aa21.21■□□□□ 0.99
TSC2-207ENST00000439673 SIN3AQ96ST3 1273 aa21.18■□□□□ 0.98
TSC2-207ENST00000439673 PTMAP06454 111 aaKnown RBP21.17■□□□□ 0.98
TSC2-207ENST00000439673 PPP1R15AO75807 674 aaPredicted RBP21.16■□□□□ 0.98
TSC2-207ENST00000439673 CDK11BP21127 795 aaKnown RBP21.16■□□□□ 0.98
TSC2-207ENST00000439673 TNNT2P45379 298 aaPredicted RBP21.14■□□□□ 0.98
TSC2-207ENST00000439673 CHMP4BQ9H444 224 aaKnown RBP21.14■□□□□ 0.98
TSC2-207ENST00000439673 CCER2I3L3R5 266 aa21.13■□□□□ 0.97
TSC2-207ENST00000439673 NUDCQ9Y266 331 aa21.13■□□□□ 0.97
TSC2-207ENST00000439673 MS4A1P11836 297 aa21.13■□□□□ 0.97
TSC2-207ENST00000439673 KCNH8Q96L42 1107 aa21.13■□□□□ 0.97
TSC2-207ENST00000439673 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
TSC2-207ENST00000439673 CCNB3Q8WWL7 1395 aa21.12■□□□□ 0.97
TSC2-207ENST00000439673 MAPK8IP3Q9UPT6 1336 aa21.12■□□□□ 0.97
TSC2-207ENST00000439673 LAS1LQ9Y4W2 734 aaKnown RBP21.12■□□□□ 0.97
TSC2-207ENST00000439673 SENP3-EIF4A1A0A087X0R7 540 aa21.11■□□□□ 0.97
TSC2-207ENST00000439673 RGS3P49796 1198 aa21.11■□□□□ 0.97
TSC2-207ENST00000439673 ZRSR1Q15695 479 aaKnown RBP21.11■□□□□ 0.97
TSC2-207ENST00000439673 B4GALNT3Q6L9W6 998 aa21.07■□□□□ 0.96
TSC2-207ENST00000439673 NEUROD2Q15784 382 aa21.07■□□□□ 0.96
TSC2-207ENST00000439673 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
TSC2-207ENST00000439673 BAZ1BQ9UIG0 1483 aaKnown RBP21.06■□□□□ 0.96
TSC2-207ENST00000439673 DNTTIP2Q5QJE6 756 aaKnown RBP21.06■□□□□ 0.96
TSC2-207ENST00000439673 C14orf37Q86TY3 774 aa21.04■□□□□ 0.96
TSC2-207ENST00000439673 FRAT1Q92837 279 aaPredicted RBP21.04■□□□□ 0.96
TSC2-207ENST00000439673 NAP1L5Q96NT1 182 aaPredicted RBP21.02■□□□□ 0.95
TSC2-207ENST00000439673 ZBTB7CA1YPR0 619 aa21■□□□□ 0.95
TSC2-207ENST00000439673 TMF1P82094 1093 aa20.99■□□□□ 0.95
TSC2-207ENST00000439673 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
TSC2-207ENST00000439673 PNNQ9H307 717 aaKnown RBP20.98■□□□□ 0.95
TSC2-207ENST00000439673 CC2D1BQ5T0F9 858 aaKnown RBP20.98■□□□□ 0.95
TSC2-207ENST00000439673 NACADO15069 1562 aa20.96■□□□□ 0.95
TSC2-207ENST00000439673 SENP3Q9H4L4 574 aaPredicted RBP20.95■□□□□ 0.94
TSC2-207ENST00000439673 RBM19Q9Y4C8 960 aaKnown RBP20.95■□□□□ 0.94
TSC2-207ENST00000439673 SETD5Q9C0A6 1442 aa20.93■□□□□ 0.94
TSC2-207ENST00000439673 RTN4Q9NQC3 1192 aaKnown RBP20.93■□□□□ 0.94
TSC2-207ENST00000439673 L1TD1Q5T7N2 865 aaKnown RBP20.93■□□□□ 0.94
TSC2-207ENST00000439673 POGKQ9P215 609 aa20.93■□□□□ 0.94
TSC2-207ENST00000439673 A0A0G2JS52 829 aa20.92■□□□□ 0.94
TSC2-207ENST00000439673 HSCBQ8IWL3 235 aa20.92■□□□□ 0.94
TSC2-207ENST00000439673 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
TSC2-207ENST00000439673 DCAF11Q8TEB1 546 aa20.9■□□□□ 0.94
TSC2-207ENST00000439673 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.94
TSC2-207ENST00000439673 U2SURPO15042 1029 aaKnown RBP20.89■□□□□ 0.93
TSC2-207ENST00000439673 DEKP35659 375 aaKnown RBP20.89■□□□□ 0.93
TSC2-207ENST00000439673 CFAP44Q96MT7 982 aa20.89■□□□□ 0.93
TSC2-207ENST00000439673 GOLGA6L6A8MZA4 724 aa20.87■□□□□ 0.93
TSC2-207ENST00000439673 HSPA5P11021 654 aaKnown RBP20.87■□□□□ 0.93
TSC2-207ENST00000439673 NRDCO43847 1150 aa20.86■□□□□ 0.93
TSC2-207ENST00000439673 PLCB2Q00722 1185 aa20.86■□□□□ 0.93
TSC2-207ENST00000439673 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
TSC2-207ENST00000439673 PLEKHG5O94827 1062 aa20.85■□□□□ 0.93
TSC2-207ENST00000439673 TPRNQ4KMQ1 711 aa20.85■□□□□ 0.93
TSC2-207ENST00000439673 HAP1P54257 671 aaPredicted RBP20.83■□□□□ 0.92
TSC2-207ENST00000439673 SOGA1O94964 1423 aa20.82■□□□□ 0.92
TSC2-207ENST00000439673 OS9Q13438 667 aaPredicted RBP20.81■□□□□ 0.92
TSC2-207ENST00000439673 FGD1P98174 961 aa20.81■□□□□ 0.92
TSC2-207ENST00000439673 KTN1Q86UP2 1357 aaKnown RBP20.81■□□□□ 0.92
TSC2-207ENST00000439673 KCNJ4P48050 445 aa20.8■□□□□ 0.92
TSC2-207ENST00000439673 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
TSC2-207ENST00000439673 TCERG1O14776 1098 aaKnown RBP20.8■□□□□ 0.92
TSC2-207ENST00000439673 KANK1Q14678 1352 aa20.79■□□□□ 0.92
TSC2-207ENST00000439673 MCCP23508 829 aa20.78■□□□□ 0.92
TSC2-207ENST00000439673 GOLGA6L4A6NEF3 574 aa20.78■□□□□ 0.92
TSC2-207ENST00000439673 MORC1Q86VD1 984 aa20.78■□□□□ 0.92
TSC2-207ENST00000439673 MSNP26038 577 aaKnown RBP20.78■□□□□ 0.92
TSC2-207ENST00000439673 CHAF1AQ13111 956 aaPredicted RBP20.78■□□□□ 0.92
TSC2-207ENST00000439673 RALBP1Q15311 655 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms