RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 EFCAB5A4FU69 1503 aa26.56■■□□□ 1.84
TVP23C-204ENST00000438826 THOC2Q8NI27 1593 aaKnown RBP26.56■■□□□ 1.84
TVP23C-204ENST00000438826 GRIN2BQ13224 1484 aa26.56■■□□□ 1.84
TVP23C-204ENST00000438826 FHAD1B1AJZ9 1412 aa26.55■■□□□ 1.84
TVP23C-204ENST00000438826 ZNF608Q9ULD9 1512 aaPredicted RBP26.52■■□□□ 1.84
TVP23C-204ENST00000438826 KANK4Q5T7N3 995 aaPredicted RBP26.5■■□□□ 1.83
TVP23C-204ENST00000438826 ADAMTS12P58397 1594 aa26.49■■□□□ 1.83
TVP23C-204ENST00000438826 P3H3Q8IVL6 736 aa26.48■■□□□ 1.83
TVP23C-204ENST00000438826 MAP3K1Q13233 1512 aa26.46■■□□□ 1.83
TVP23C-204ENST00000438826 FHOD3Q2V2M9 1422 aa26.45■■□□□ 1.83
TVP23C-204ENST00000438826 EIF4G3O43432 1585 aaKnown RBP26.4■■□□□ 1.82
TVP23C-204ENST00000438826 TIAM1Q13009 1591 aa26.39■■□□□ 1.82
TVP23C-204ENST00000438826 SAMD9Q5K651 1589 aa26.38■■□□□ 1.81
TVP23C-204ENST00000438826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.38■■□□□ 1.81
TVP23C-204ENST00000438826 FMN1Q68DA7 1419 aa26.37■■□□□ 1.81
TVP23C-204ENST00000438826 PCF11O94913 1555 aaKnown RBP26.37■■□□□ 1.81
TVP23C-204ENST00000438826 FYCO1Q9BQS8 1478 aa26.35■■□□□ 1.81
TVP23C-204ENST00000438826 CASKIN1Q8WXD9 1431 aa26.34■■□□□ 1.81
TVP23C-204ENST00000438826 CCER1Q8TC90 406 aaPredicted RBP26.34■■□□□ 1.81
TVP23C-204ENST00000438826 SNAPC4Q5SXM2 1469 aa26.34■■□□□ 1.81
TVP23C-204ENST00000438826 HNRNPUL2Q1KMD3 747 aaKnown RBP26.32■■□□□ 1.8
TVP23C-204ENST00000438826 IQGAP2Q13576 1575 aa26.3■■□□□ 1.8
TVP23C-204ENST00000438826 LRRC9Q6ZRR7 1453 aa26.3■■□□□ 1.8
TVP23C-204ENST00000438826 RRBP1Q9P2E9 1410 aaKnown RBP26.28■■□□□ 1.8
TVP23C-204ENST00000438826 ATP1B4Q9UN42 357 aaPredicted RBP26.28■■□□□ 1.8
TVP23C-204ENST00000438826 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
TVP23C-204ENST00000438826 CFAP43Q8NDM7 1665 aa26.27■■□□□ 1.8
TVP23C-204ENST00000438826 GRIN2AQ12879 1464 aa26.24■■□□□ 1.79
TVP23C-204ENST00000438826 KIAA0586Q9BVV6 1533 aa26.2■■□□□ 1.79
TVP23C-204ENST00000438826 CCNB3Q8WWL7 1395 aa26.19■■□□□ 1.78
TVP23C-204ENST00000438826 SYNJ2O15056 1496 aa26.19■■□□□ 1.78
TVP23C-204ENST00000438826 UGGT2Q9NYU1 1516 aa26.18■■□□□ 1.78
TVP23C-204ENST00000438826 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
TVP23C-204ENST00000438826 PHLDB1Q86UU1 1377 aa26.09■■□□□ 1.77
TVP23C-204ENST00000438826 FBLN2P98095 1184 aa26.06■■□□□ 1.76
TVP23C-204ENST00000438826 CEP170Q5SW79 1584 aa26.04■■□□□ 1.76
TVP23C-204ENST00000438826 LRRIQ1Q96JM4 1722 aa26.04■■□□□ 1.76
TVP23C-204ENST00000438826 DISP1Q96F81 1524 aa26.03■■□□□ 1.76
TVP23C-204ENST00000438826 MTUS2Q5JR59 1369 aa26.03■■□□□ 1.76
TVP23C-204ENST00000438826 KIAA0556O60303 1618 aa26.02■■□□□ 1.76
TVP23C-204ENST00000438826 NUP160Q12769 1436 aa26.02■■□□□ 1.76
TVP23C-204ENST00000438826 CCDC18Q5T9S5 1454 aa26.02■■□□□ 1.76
TVP23C-204ENST00000438826 HECW1Q76N89 1606 aa26.01■■□□□ 1.75
TVP23C-204ENST00000438826 EHBP1L1Q8N3D4 1523 aa25.94■■□□□ 1.74
TVP23C-204ENST00000438826 ITGAEP38570 1179 aa25.93■■□□□ 1.74
TVP23C-204ENST00000438826 EPRSP07814 1512 aaKnown RBP25.92■■□□□ 1.74
TVP23C-204ENST00000438826 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.91■■□□□ 1.74
TVP23C-204ENST00000438826 FAM50AQ14320 339 aaKnown RBP25.91■■□□□ 1.74
TVP23C-204ENST00000438826 JPH4Q96JJ6 628 aa25.9■■□□□ 1.74
TVP23C-204ENST00000438826 NCOA2Q15596 1464 aa25.88■■□□□ 1.73
TVP23C-204ENST00000438826 SUPT6HQ7KZ85 1726 aaKnown RBP25.88■■□□□ 1.73
TVP23C-204ENST00000438826 CARMIL2Q6F5E8 1435 aa25.88■■□□□ 1.73
TVP23C-204ENST00000438826 FGD6Q6ZV73 1430 aa25.86■■□□□ 1.73
TVP23C-204ENST00000438826 MAGI3Q5TCQ9 1506 aa25.86■■□□□ 1.73
TVP23C-204ENST00000438826 CDK13Q14004 1512 aaKnown RBP25.83■■□□□ 1.73
TVP23C-204ENST00000438826 RAPGEF6Q8TEU7 1601 aa25.82■■□□□ 1.72
TVP23C-204ENST00000438826 MYOM3Q5VTT5 1437 aa25.82■■□□□ 1.72
TVP23C-204ENST00000438826 DHX57Q6P158 1386 aaKnown RBP25.81■■□□□ 1.72
TVP23C-204ENST00000438826 CLSPNQ9HAW4 1339 aa25.81■■□□□ 1.72
TVP23C-204ENST00000438826 ARHGEF11O15085 1522 aa25.81■■□□□ 1.72
TVP23C-204ENST00000438826 NUP153P49790 1475 aaKnown RBP25.79■■□□□ 1.72
TVP23C-204ENST00000438826 ARID3CA6NKF2 412 aa25.77■■□□□ 1.72
TVP23C-204ENST00000438826 SETD5Q9C0A6 1442 aa25.75■■□□□ 1.71
TVP23C-204ENST00000438826 RAB3GAP2Q9H2M9 1393 aa25.75■■□□□ 1.71
TVP23C-204ENST00000438826 CHD1O14646 1710 aa25.73■■□□□ 1.71
TVP23C-204ENST00000438826 CDK11AQ9UQ88 783 aaPredicted RBP25.72■■□□□ 1.71
TVP23C-204ENST00000438826 PLB1Q6P1J6 1458 aa25.72■■□□□ 1.71
TVP23C-204ENST00000438826 PRG4Q92954 1404 aaPredicted RBP25.67■■□□□ 1.7
TVP23C-204ENST00000438826 PTPN23Q9H3S7 1636 aa25.67■■□□□ 1.7
TVP23C-204ENST00000438826 TCOF1Q13428 1488 aaKnown RBP25.64■■□□□ 1.7
TVP23C-204ENST00000438826 MIA2Q96PC5 1412 aa25.64■■□□□ 1.69
TVP23C-204ENST00000438826 ABCA8O94911 1581 aa25.61■■□□□ 1.69
TVP23C-204ENST00000438826 PTPRKQ15262 1439 aa25.6■■□□□ 1.69
TVP23C-204ENST00000438826 TROQ12816 1431 aaPredicted RBP25.59■■□□□ 1.69
TVP23C-204ENST00000438826 PTPRGP23470 1445 aa25.58■■□□□ 1.69
TVP23C-204ENST00000438826 SHROOM2Q13796 1616 aa25.57■■□□□ 1.68
TVP23C-204ENST00000438826 HFM1A2PYH4 1435 aa25.55■■□□□ 1.68
TVP23C-204ENST00000438826 ATP10BO94823 1461 aa25.5■■□□□ 1.67
TVP23C-204ENST00000438826 MAPKBP1O60336 1514 aa25.49■■□□□ 1.67
TVP23C-204ENST00000438826 ADCY10Q96PN6 1610 aa25.48■■□□□ 1.67
TVP23C-204ENST00000438826 PLEKHD1A6NEE1 506 aa25.48■■□□□ 1.67
TVP23C-204ENST00000438826 NAIPQ13075 1403 aa25.47■■□□□ 1.67
TVP23C-204ENST00000438826 CLASP1Q7Z460 1538 aa25.45■■□□□ 1.66
TVP23C-204ENST00000438826 ZNF316A6NFI3 1004 aaPredicted RBP25.44■■□□□ 1.66
TVP23C-204ENST00000438826 UACAQ9BZF9 1416 aa25.43■■□□□ 1.66
TVP23C-204ENST00000438826 KIF14Q15058 1648 aa25.42■■□□□ 1.66
TVP23C-204ENST00000438826 AKNAQ7Z591 1439 aa25.42■■□□□ 1.66
TVP23C-204ENST00000438826 GPATCH8Q9UKJ3 1502 aaKnown RBP25.41■■□□□ 1.66
TVP23C-204ENST00000438826 ITSN2Q9NZM3 1697 aa25.4■■□□□ 1.66
TVP23C-204ENST00000438826 CFDP1Q9UEE9 299 aaPredicted RBP25.39■■□□□ 1.66
TVP23C-204ENST00000438826 CHIC2Q9UKJ5 165 aa25.39■■□□□ 1.66
TVP23C-204ENST00000438826 ERCC6L2Q5T890 1561 aa25.39■■□□□ 1.65
TVP23C-204ENST00000438826 DAPK1P53355 1430 aa25.37■■□□□ 1.65
TVP23C-204ENST00000438826 ZNF644Q9H582 1327 aaPredicted RBP25.37■■□□□ 1.65
TVP23C-204ENST00000438826 RRP7BPQ9NSQ0 103 aa25.36■■□□□ 1.65
TVP23C-204ENST00000438826 DNMT1P26358 1616 aaKnown RBP25.35■■□□□ 1.65
TVP23C-204ENST00000438826 GCC2Q8IWJ2 1684 aa25.35■■□□□ 1.65
TVP23C-204ENST00000438826 ABCC5O15440 1437 aa25.35■■□□□ 1.65
TVP23C-204ENST00000438826 ROCK1Q13464 1354 aa25.33■■□□□ 1.65
TVP23C-204ENST00000438826 CAMSAP2Q08AD1 1489 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms