RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 EIF4G3O43432 1585 aaKnown RBP26.02■■□□□ 1.76
GSE1-206ENST00000438180 APLP2Q06481 763 aa26.01■■□□□ 1.75
GSE1-206ENST00000438180 EFCAB5A4FU69 1503 aa26■■□□□ 1.75
GSE1-206ENST00000438180 PPARGC1BQ86YN6 1023 aaKnown RBP25.97■■□□□ 1.75
GSE1-206ENST00000438180 MAGI1Q96QZ7 1491 aaPredicted RBP25.9■■□□□ 1.74
GSE1-206ENST00000438180 SNAPC4Q5SXM2 1469 aa25.88■■□□□ 1.73
GSE1-206ENST00000438180 SAMD9Q5K651 1589 aa25.82■■□□□ 1.72
GSE1-206ENST00000438180 IQGAP2Q13576 1575 aa25.8■■□□□ 1.72
GSE1-206ENST00000438180 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
GSE1-206ENST00000438180 GRIN2AQ12879 1464 aa25.78■■□□□ 1.72
GSE1-206ENST00000438180 SYNJ2O15056 1496 aa25.77■■□□□ 1.72
GSE1-206ENST00000438180 TTBK1Q5TCY1 1321 aaPredicted RBP25.76■■□□□ 1.71
GSE1-206ENST00000438180 FMN1Q68DA7 1419 aa25.76■■□□□ 1.71
GSE1-206ENST00000438180 FHOD3Q2V2M9 1422 aa25.75■■□□□ 1.71
GSE1-206ENST00000438180 FYCO1Q9BQS8 1478 aa25.72■■□□□ 1.71
GSE1-206ENST00000438180 KIAA0586Q9BVV6 1533 aa25.71■■□□□ 1.71
GSE1-206ENST00000438180 PCF11O94913 1555 aaKnown RBP25.7■■□□□ 1.71
GSE1-206ENST00000438180 P3H3Q8IVL6 736 aa25.69■■□□□ 1.7
GSE1-206ENST00000438180 HRCP23327 699 aa25.68■■□□□ 1.7
GSE1-206ENST00000438180 TIAM1Q13009 1591 aa25.68■■□□□ 1.7
GSE1-206ENST00000438180 CASKIN1Q8WXD9 1431 aa25.68■■□□□ 1.7
GSE1-206ENST00000438180 UGGT2Q9NYU1 1516 aa25.67■■□□□ 1.7
GSE1-206ENST00000438180 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
GSE1-206ENST00000438180 CFAP43Q8NDM7 1665 aa25.65■■□□□ 1.7
GSE1-206ENST00000438180 CEP170Q5SW79 1584 aa25.58■■□□□ 1.69
GSE1-206ENST00000438180 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
GSE1-206ENST00000438180 NUP160Q12769 1436 aa25.57■■□□□ 1.68
GSE1-206ENST00000438180 LRRC9Q6ZRR7 1453 aa25.55■■□□□ 1.68
GSE1-206ENST00000438180 FBLN2P98095 1184 aa25.54■■□□□ 1.68
GSE1-206ENST00000438180 KIAA0556O60303 1618 aa25.52■■□□□ 1.68
GSE1-206ENST00000438180 ATP1B4Q9UN42 357 aaPredicted RBP25.51■■□□□ 1.67
GSE1-206ENST00000438180 HECW1Q76N89 1606 aa25.48■■□□□ 1.67
GSE1-206ENST00000438180 DISP1Q96F81 1524 aa25.47■■□□□ 1.67
GSE1-206ENST00000438180 CCDC18Q5T9S5 1454 aa25.46■■□□□ 1.67
GSE1-206ENST00000438180 RRBP1Q9P2E9 1410 aaKnown RBP25.45■■□□□ 1.67
GSE1-206ENST00000438180 ZEB1P37275 1124 aaPredicted RBP25.43■■□□□ 1.66
GSE1-206ENST00000438180 CARMIL2Q6F5E8 1435 aa25.42■■□□□ 1.66
GSE1-206ENST00000438180 CHD1O14646 1710 aa25.41■■□□□ 1.66
GSE1-206ENST00000438180 LRRIQ1Q96JM4 1722 aa25.39■■□□□ 1.66
GSE1-206ENST00000438180 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
GSE1-206ENST00000438180 CCNB3Q8WWL7 1395 aa25.36■■□□□ 1.65
GSE1-206ENST00000438180 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
GSE1-206ENST00000438180 EHBP1L1Q8N3D4 1523 aa25.34■■□□□ 1.65
GSE1-206ENST00000438180 RAPGEF6Q8TEU7 1601 aa25.31■■□□□ 1.64
GSE1-206ENST00000438180 EPRSP07814 1512 aaKnown RBP25.31■■□□□ 1.64
GSE1-206ENST00000438180 HNRNPUL2Q1KMD3 747 aaKnown RBP25.29■■□□□ 1.64
GSE1-206ENST00000438180 SUPT6HQ7KZ85 1726 aaKnown RBP25.28■■□□□ 1.64
GSE1-206ENST00000438180 PHLDB1Q86UU1 1377 aa25.27■■□□□ 1.64
GSE1-206ENST00000438180 CCER1Q8TC90 406 aaPredicted RBP25.24■■□□□ 1.63
GSE1-206ENST00000438180 SHROOM2Q13796 1616 aa25.22■■□□□ 1.63
GSE1-206ENST00000438180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.2■■□□□ 1.63
GSE1-206ENST00000438180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.2■■□□□ 1.622e-6■■■■□ 19.8
GSE1-206ENST00000438180 NUP153P49790 1475 aaKnown RBP25.2■■□□□ 1.62
GSE1-206ENST00000438180 PRG4Q92954 1404 aaPredicted RBP25.19■■□□□ 1.62
GSE1-206ENST00000438180 CDK13Q14004 1512 aaKnown RBP25.19■■□□□ 1.62
GSE1-206ENST00000438180 NCOA2Q15596 1464 aa25.19■■□□□ 1.62
GSE1-206ENST00000438180 MAGI3Q5TCQ9 1506 aa25.16■■□□□ 1.62
GSE1-206ENST00000438180 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
GSE1-206ENST00000438180 CDK11AQ9UQ88 783 aaPredicted RBP25.15■■□□□ 1.62
GSE1-206ENST00000438180 FGD6Q6ZV73 1430 aa25.14■■□□□ 1.61
GSE1-206ENST00000438180 MYOM3Q5VTT5 1437 aa25.13■■□□□ 1.61
GSE1-206ENST00000438180 PLB1Q6P1J6 1458 aa25.13■■□□□ 1.61
GSE1-206ENST00000438180 ABCA8O94911 1581 aa25.12■■□□□ 1.61
GSE1-206ENST00000438180 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
GSE1-206ENST00000438180 FAM50AQ14320 339 aaKnown RBP25.09■■□□□ 1.61
GSE1-206ENST00000438180 PTPRGP23470 1445 aa25.08■■□□□ 1.61
GSE1-206ENST00000438180 ARID3CA6NKF2 412 aa25.01■■□□□ 1.59
GSE1-206ENST00000438180 ITGAEP38570 1179 aa25.01■■□□□ 1.59
GSE1-206ENST00000438180 TROQ12816 1431 aaPredicted RBP25.01■■□□□ 1.59
GSE1-206ENST00000438180 MIA2Q96PC5 1412 aa25■■□□□ 1.59
GSE1-206ENST00000438180 PTPN23Q9H3S7 1636 aa25■■□□□ 1.59
GSE1-206ENST00000438180 ADCY10Q96PN6 1610 aa24.98■■□□□ 1.59
GSE1-206ENST00000438180 TCOF1Q13428 1488 aaKnown RBP24.97■■□□□ 1.59
GSE1-206ENST00000438180 UACAQ9BZF9 1416 aa24.95■■□□□ 1.58
GSE1-206ENST00000438180 ATP10BO94823 1461 aa24.93■■□□□ 1.58
GSE1-206ENST00000438180 SETD5Q9C0A6 1442 aa24.93■■□□□ 1.58
GSE1-206ENST00000438180 CLSPNQ9HAW4 1339 aa24.92■■□□□ 1.58
GSE1-206ENST00000438180 ITSN2Q9NZM3 1697 aa24.92■■□□□ 1.58
GSE1-206ENST00000438180 ERCC6L2Q5T890 1561 aa24.9■■□□□ 1.58
GSE1-206ENST00000438180 PLEKHD1A6NEE1 506 aa24.89■■□□□ 1.58
GSE1-206ENST00000438180 KIF14Q15058 1648 aa24.89■■□□□ 1.58
GSE1-206ENST00000438180 ABCC2Q92887 1545 aa24.89■■□□□ 1.57
GSE1-206ENST00000438180 RAB3GAP2Q9H2M9 1393 aa24.87■■□□□ 1.57
GSE1-206ENST00000438180 DHX57Q6P158 1386 aaKnown RBP24.84■■□□□ 1.57
GSE1-206ENST00000438180 UHRF1BP1LA0JNW5 1464 aa24.83■■□□□ 1.57
GSE1-206ENST00000438180 HFM1A2PYH4 1435 aa24.8■■□□□ 1.56
GSE1-206ENST00000438180 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
GSE1-206ENST00000438180 GPATCH8Q9UKJ3 1502 aaKnown RBP24.77■■□□□ 1.56
GSE1-206ENST00000438180 AKNAQ7Z591 1439 aa24.77■■□□□ 1.56
GSE1-206ENST00000438180 PTPRKQ15262 1439 aa24.76■■□□□ 1.55
GSE1-206ENST00000438180 ABCC10Q5T3U5 1492 aa24.75■■□□□ 1.55
GSE1-206ENST00000438180 DNMT1P26358 1616 aaKnown RBP24.74■■□□□ 1.55
GSE1-206ENST00000438180 CFDP1Q9UEE9 299 aaPredicted RBP24.73■■□□□ 1.55
GSE1-206ENST00000438180 CDC42BPAQ5VT25 1732 aa24.73■■□□□ 1.55
GSE1-206ENST00000438180 GCC2Q8IWJ2 1684 aa24.71■■□□□ 1.55
GSE1-206ENST00000438180 CAMSAP2Q08AD1 1489 aa24.71■■□□□ 1.55
GSE1-206ENST00000438180 KDM5BQ9UGL1 1544 aa24.71■■□□□ 1.55
GSE1-206ENST00000438180 DAPK1P53355 1430 aa24.69■■□□□ 1.54
GSE1-206ENST00000438180 NAIPQ13075 1403 aa24.69■■□□□ 1.54
GSE1-206ENST00000438180 ZCCHC11Q5TAX3 1644 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms