RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 ADAMTS12P58397 1594 aa23.02■■□□□ 1.28
SMAD9-IT1-201ENST00000437983 PRG4Q92954 1404 aaPredicted RBP23.01■■□□□ 1.27
SMAD9-IT1-201ENST00000437983 DIP2BQ9P265 1576 aa23■■□□□ 1.27
SMAD9-IT1-201ENST00000437983 MAPKBP1O60336 1514 aa22.95■■□□□ 1.26
SMAD9-IT1-201ENST00000437983 NPM1P06748 294 aaKnown RBP eCLIP22.95■■□□□ 1.26
SMAD9-IT1-201ENST00000437983 JPH4Q96JJ6 628 aa22.93■■□□□ 1.26
SMAD9-IT1-201ENST00000437983 FHAD1B1AJZ9 1412 aa22.92■■□□□ 1.26
SMAD9-IT1-201ENST00000437983 TSPOAP1O95153 1857 aa22.92■■□□□ 1.26
SMAD9-IT1-201ENST00000437983 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
SMAD9-IT1-201ENST00000437983 ADGRL1O94910 1474 aa22.85■■□□□ 1.25
SMAD9-IT1-201ENST00000437983 HECW2Q9P2P5 1572 aa22.84■■□□□ 1.25
SMAD9-IT1-201ENST00000437983 WRNQ14191 1432 aaPredicted RBP eCLIP22.81■■□□□ 1.24
SMAD9-IT1-201ENST00000437983 FOXD1Q16676 465 aa22.79■■□□□ 1.24
SMAD9-IT1-201ENST00000437983 ADRA2BP18089 450 aa22.77■■□□□ 1.24
SMAD9-IT1-201ENST00000437983 ERICH3Q5RHP9 1530 aa22.74■■□□□ 1.23
SMAD9-IT1-201ENST00000437983 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
SMAD9-IT1-201ENST00000437983 FBXO41Q8TF61 875 aa22.67■■□□□ 1.22
SMAD9-IT1-201ENST00000437983 PPP6R1Q9UPN7 881 aa22.66■■□□□ 1.22
SMAD9-IT1-201ENST00000437983 PPRC1Q5VV67 1664 aaKnown RBP22.65■■□□□ 1.22
SMAD9-IT1-201ENST00000437983 COL17A1Q9UMD9 1497 aaPredicted RBP22.65■■□□□ 1.22
SMAD9-IT1-201ENST00000437983 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
SMAD9-IT1-201ENST00000437983 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
SMAD9-IT1-201ENST00000437983 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
SMAD9-IT1-201ENST00000437983 ASXL2Q76L83 1435 aa22.55■■□□□ 1.2
SMAD9-IT1-201ENST00000437983 GLI2P10070 1586 aa22.53■■□□□ 1.2
SMAD9-IT1-201ENST00000437983 PTPRGP23470 1445 aa22.51■■□□□ 1.19
SMAD9-IT1-201ENST00000437983 KIAA0586Q9BVV6 1533 aa22.51■■□□□ 1.19
SMAD9-IT1-201ENST00000437983 ABCC2Q92887 1545 aa22.49■■□□□ 1.19
SMAD9-IT1-201ENST00000437983 PLB1Q6P1J6 1458 aa22.48■■□□□ 1.19
SMAD9-IT1-201ENST00000437983 CUL7Q14999 1698 aa22.4■■□□□ 1.18
SMAD9-IT1-201ENST00000437983 MAP3K4Q9Y6R4 1608 aa22.39■■□□□ 1.18
SMAD9-IT1-201ENST00000437983 EPRSP07814 1512 aaKnown RBP22.39■■□□□ 1.17
SMAD9-IT1-201ENST00000437983 TNIKQ9UKE5 1360 aa22.38■■□□□ 1.17
SMAD9-IT1-201ENST00000437983 TEX14Q8IWB6 1497 aa22.35■■□□□ 1.17
SMAD9-IT1-201ENST00000437983 LMTK3Q96Q04 1460 aa22.34■■□□□ 1.17
SMAD9-IT1-201ENST00000437983 IGF1RP08069 1367 aa22.33■■□□□ 1.17
SMAD9-IT1-201ENST00000437983 UHRF1BP1LA0JNW5 1464 aa22.32■■□□□ 1.16
SMAD9-IT1-201ENST00000437983 UACAQ9BZF9 1416 aa22.3■■□□□ 1.16
SMAD9-IT1-201ENST00000437983 CARMIL2Q6F5E8 1435 aa22.29■■□□□ 1.16
SMAD9-IT1-201ENST00000437983 KDM5BQ9UGL1 1544 aa22.25■■□□□ 1.15
SMAD9-IT1-201ENST00000437983 KIF21BO75037 1637 aa22.22■■□□□ 1.15
SMAD9-IT1-201ENST00000437983 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
SMAD9-IT1-201ENST00000437983 ILDR2Q71H61 639 aa22.22■■□□□ 1.15
SMAD9-IT1-201ENST00000437983 ZCCHC11Q5TAX3 1644 aaKnown RBP22.21■■□□□ 1.15
SMAD9-IT1-201ENST00000437983 DISP1Q96F81 1524 aa22.17■■□□□ 1.14
SMAD9-IT1-201ENST00000437983 PTPRMP28827 1452 aa22.15■■□□□ 1.14
SMAD9-IT1-201ENST00000437983 SOCS7O14512 581 aa22.14■■□□□ 1.13
SMAD9-IT1-201ENST00000437983 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
SMAD9-IT1-201ENST00000437983 CARMIL1Q5VZK9 1371 aa22.13■■□□□ 1.13
SMAD9-IT1-201ENST00000437983 IQGAP2Q13576 1575 aa22.13■■□□□ 1.13
SMAD9-IT1-201ENST00000437983 WDR7Q9Y4E6 1490 aa22.13■■□□□ 1.13
SMAD9-IT1-201ENST00000437983 CD109Q6YHK3 1445 aa22.13■■□□□ 1.13
SMAD9-IT1-201ENST00000437983 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
SMAD9-IT1-201ENST00000437983 KCNH8Q96L42 1107 aa22.09■■□□□ 1.13
SMAD9-IT1-201ENST00000437983 KCNA4P22459 653 aa22.08■■□□□ 1.13
SMAD9-IT1-201ENST00000437983 ADAMTSL3P82987 1691 aa22.07■■□□□ 1.12
SMAD9-IT1-201ENST00000437983 DISP3Q9P2K9 1392 aa22.07■■□□□ 1.12
SMAD9-IT1-201ENST00000437983 PCF11O94913 1555 aaKnown RBP22.07■■□□□ 1.12
SMAD9-IT1-201ENST00000437983 CFAP43Q8NDM7 1665 aa22.03■■□□□ 1.12
SMAD9-IT1-201ENST00000437983 CERKQ8TCT0 537 aa22.02■■□□□ 1.12
SMAD9-IT1-201ENST00000437983 HSPA2P54652 639 aa22.01■■□□□ 1.11
SMAD9-IT1-201ENST00000437983 ARAP3Q8WWN8 1544 aa21.97■■□□□ 1.11
SMAD9-IT1-201ENST00000437983 UGGT2Q9NYU1 1516 aa21.97■■□□□ 1.11
SMAD9-IT1-201ENST00000437983 KIAA0556O60303 1618 aa21.97■■□□□ 1.11
SMAD9-IT1-201ENST00000437983 MADDQ8WXG6 1647 aa21.95■■□□□ 1.1
SMAD9-IT1-201ENST00000437983 RAPGEF3O95398 923 aa21.92■■□□□ 1.1
SMAD9-IT1-201ENST00000437983 BCORL1Q5H9F3 1711 aa21.92■■□□□ 1.1
SMAD9-IT1-201ENST00000437983 ARID4BQ4LE39 1312 aaPredicted RBP21.91■■□□□ 1.1
SMAD9-IT1-201ENST00000437983 ABCA8O94911 1581 aa21.85■■□□□ 1.09
SMAD9-IT1-201ENST00000437983 RIMS1Q86UR5 1692 aaKnown RBP21.84■■□□□ 1.09
SMAD9-IT1-201ENST00000437983 ARID3CA6NKF2 412 aa21.82■■□□□ 1.08
SMAD9-IT1-201ENST00000437983 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
SMAD9-IT1-201ENST00000437983 FRMPD1Q5SYB0 1578 aa21.78■■□□□ 1.08
SMAD9-IT1-201ENST00000437983 SPATA31D1Q6ZQQ2 1576 aa21.78■■□□□ 1.08
SMAD9-IT1-201ENST00000437983 PHLDB1Q86UU1 1377 aa21.76■■□□□ 1.07
SMAD9-IT1-201ENST00000437983 ABCA9Q8IUA7 1624 aa21.72■■□□□ 1.07
SMAD9-IT1-201ENST00000437983 ATP10BO94823 1461 aa21.7■■□□□ 1.06
SMAD9-IT1-201ENST00000437983 NEO1Q92859 1461 aa21.7■■□□□ 1.06
SMAD9-IT1-201ENST00000437983 PIAS4Q8N2W9 510 aaPredicted RBP21.68■■□□□ 1.06
SMAD9-IT1-201ENST00000437983 GOLGA3Q08378 1498 aa21.67■■□□□ 1.06
SMAD9-IT1-201ENST00000437983 ARHGEF40Q8TER5 1519 aa21.66■■□□□ 1.06
SMAD9-IT1-201ENST00000437983 SIGLEC1Q9BZZ2 1709 aa21.63■■□□□ 1.05
SMAD9-IT1-201ENST00000437983 MLECQ14165 292 aa21.63■■□□□ 1.05
SMAD9-IT1-201ENST00000437983 CTTNBP2Q8WZ74 1663 aa21.61■■□□□ 1.05
SMAD9-IT1-201ENST00000437983 EHMT2Q96KQ7 1210 aa21.6■■□□□ 1.05
SMAD9-IT1-201ENST00000437983 P3H3Q8IVL6 736 aa21.59■■□□□ 1.05
SMAD9-IT1-201ENST00000437983 POGZQ7Z3K3 1410 aa21.58■■□□□ 1.05
SMAD9-IT1-201ENST00000437983 YEATS2Q9ULM3 1422 aa21.57■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 RICTORQ6R327 1708 aa21.57■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 FANCAO15360 1455 aa21.57■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 DENND4BO75064 1496 aaPredicted RBP21.57■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 STRCQ7RTU9 1775 aa21.56■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 AKNAQ7Z591 1439 aa21.55■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 CEBPAP49715 358 aaPredicted RBP21.54■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 FHOD3Q2V2M9 1422 aa21.54■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 DMRT2Q9Y5R5 561 aa21.53■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 TTC37Q6PGP7 1564 aa21.53■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 FER1L4A9Z1Z3 1794 aa21.52■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 PPP4R3CPQ6ZMV5 832 aa21.52■■□□□ 1.04
SMAD9-IT1-201ENST00000437983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms