RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
USHBP1-203ENST00000431146 P3H3Q8IVL6 736 aa25.66■■□□□ 1.7
USHBP1-203ENST00000431146 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
USHBP1-203ENST00000431146 ADAMTS12P58397 1594 aa25.58■■□□□ 1.69
USHBP1-203ENST00000431146 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
USHBP1-203ENST00000431146 FHAD1B1AJZ9 1412 aa25.56■■□□□ 1.68
USHBP1-203ENST00000431146 EIF4G3O43432 1585 aaKnown RBP25.56■■□□□ 1.68
USHBP1-203ENST00000431146 FHOD3Q2V2M9 1422 aa25.56■■□□□ 1.68
USHBP1-203ENST00000431146 EFCAB5A4FU69 1503 aa25.51■■□□□ 1.67
USHBP1-203ENST00000431146 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
USHBP1-203ENST00000431146 PCF11O94913 1555 aaKnown RBP25.47■■□□□ 1.67
USHBP1-203ENST00000431146 ATP1B4Q9UN42 357 aaPredicted RBP25.44■■□□□ 1.66
USHBP1-203ENST00000431146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.43■■□□□ 1.66
USHBP1-203ENST00000431146 SAMD9Q5K651 1589 aa25.42■■□□□ 1.66
USHBP1-203ENST00000431146 TIAM1Q13009 1591 aa25.41■■□□□ 1.66
USHBP1-203ENST00000431146 HNRNPUL2Q1KMD3 747 aaKnown RBP25.39■■□□□ 1.65
USHBP1-203ENST00000431146 IQGAP2Q13576 1575 aa25.37■■□□□ 1.65
USHBP1-203ENST00000431146 GRIN2AQ12879 1464 aa25.33■■□□□ 1.65
USHBP1-203ENST00000431146 FYCO1Q9BQS8 1478 aa25.33■■□□□ 1.65
USHBP1-203ENST00000431146 FMN1Q68DA7 1419 aa25.33■■□□□ 1.65
USHBP1-203ENST00000431146 MAP3K1Q13233 1512 aa25.33■■□□□ 1.65
USHBP1-203ENST00000431146 CASKIN1Q8WXD9 1431 aa25.32■■□□□ 1.64
USHBP1-203ENST00000431146 CFAP43Q8NDM7 1665 aa25.32■■□□□ 1.64
USHBP1-203ENST00000431146 MAGI1Q96QZ7 1491 aaPredicted RBP25.32■■□□□ 1.64
USHBP1-203ENST00000431146 CCER1Q8TC90 406 aaPredicted RBP25.3■■□□□ 1.64
USHBP1-203ENST00000431146 LRRC9Q6ZRR7 1453 aa25.29■■□□□ 1.64
USHBP1-203ENST00000431146 ZEB1P37275 1124 aaPredicted RBP25.29■■□□□ 1.64
USHBP1-203ENST00000431146 FBLN2P98095 1184 aa25.29■■□□□ 1.64
USHBP1-203ENST00000431146 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
USHBP1-203ENST00000431146 SYNJ2O15056 1496 aa25.26■■□□□ 1.63
USHBP1-203ENST00000431146 KIAA0586Q9BVV6 1533 aa25.23■■□□□ 1.63
USHBP1-203ENST00000431146 LRRIQ1Q96JM4 1722 aa25.23■■□□□ 1.63
USHBP1-203ENST00000431146 RRBP1Q9P2E9 1410 aaKnown RBP25.21■■□□□ 1.63
USHBP1-203ENST00000431146 CEP170Q5SW79 1584 aa25.2■■□□□ 1.63
USHBP1-203ENST00000431146 UGGT2Q9NYU1 1516 aa25.2■■□□□ 1.63
USHBP1-203ENST00000431146 CCNB3Q8WWL7 1395 aa25.15■■□□□ 1.62
USHBP1-203ENST00000431146 PHLDB1Q86UU1 1377 aa25.15■■□□□ 1.62
USHBP1-203ENST00000431146 DISP1Q96F81 1524 aa25.13■■□□□ 1.61
USHBP1-203ENST00000431146 KIAA0556O60303 1618 aa25.12■■□□□ 1.61
USHBP1-203ENST00000431146 ITGAEP38570 1179 aa25.09■■□□□ 1.61
USHBP1-203ENST00000431146 NUP160Q12769 1436 aa25.08■■□□□ 1.6
USHBP1-203ENST00000431146 MTUS2Q5JR59 1369 aa25.06■■□□□ 1.6
USHBP1-203ENST00000431146 ARID3CA6NKF2 412 aa25.05■■□□□ 1.6
USHBP1-203ENST00000431146 HECW1Q76N89 1606 aa25.05■■□□□ 1.6
USHBP1-203ENST00000431146 FAM50AQ14320 339 aaKnown RBP25■■□□□ 1.59
USHBP1-203ENST00000431146 JPH4Q96JJ6 628 aa25■■□□□ 1.59
USHBP1-203ENST00000431146 CDK13Q14004 1512 aaKnown RBP24.99■■□□□ 1.59
USHBP1-203ENST00000431146 MAGI3Q5TCQ9 1506 aa24.99■■□□□ 1.59
USHBP1-203ENST00000431146 CHD1O14646 1710 aa24.99■■□□□ 1.59
USHBP1-203ENST00000431146 CCDC18Q5T9S5 1454 aa24.99■■□□□ 1.59
USHBP1-203ENST00000431146 EPRSP07814 1512 aaKnown RBP24.99■■□□□ 1.59
USHBP1-203ENST00000431146 EHBP1L1Q8N3D4 1523 aa24.95■■□□□ 1.58
USHBP1-203ENST00000431146 NCOA2Q15596 1464 aa24.93■■□□□ 1.58
USHBP1-203ENST00000431146 SUPT6HQ7KZ85 1726 aaKnown RBP24.93■■□□□ 1.58
USHBP1-203ENST00000431146 RAPGEF6Q8TEU7 1601 aa24.92■■□□□ 1.58
USHBP1-203ENST00000431146 CARMIL2Q6F5E8 1435 aa24.9■■□□□ 1.58
USHBP1-203ENST00000431146 NUP153P49790 1475 aaKnown RBP24.89■■□□□ 1.57
USHBP1-203ENST00000431146 FGD6Q6ZV73 1430 aa24.89■■□□□ 1.57
USHBP1-203ENST00000431146 PLB1Q6P1J6 1458 aa24.87■■□□□ 1.57
USHBP1-203ENST00000431146 MYOM3Q5VTT5 1437 aa24.83■■□□□ 1.57
USHBP1-203ENST00000431146 PELP1Q8IZL8 1130 aaKnown RBP24.82■■□□□ 1.56
USHBP1-203ENST00000431146 ARHGEF11O15085 1522 aa24.82■■□□□ 1.56
USHBP1-203ENST00000431146 PRG4Q92954 1404 aaPredicted RBP24.81■■□□□ 1.56
USHBP1-203ENST00000431146 DHX57Q6P158 1386 aaKnown RBP24.8■■□□□ 1.56
USHBP1-203ENST00000431146 RAB3GAP2Q9H2M9 1393 aa24.77■■□□□ 1.56
USHBP1-203ENST00000431146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.77■■□□□ 1.56
USHBP1-203ENST00000431146 PTPN23Q9H3S7 1636 aa24.74■■□□□ 1.55
USHBP1-203ENST00000431146 SETD5Q9C0A6 1442 aa24.73■■□□□ 1.55
USHBP1-203ENST00000431146 ABCA8O94911 1581 aa24.7■■□□□ 1.55
USHBP1-203ENST00000431146 PTPRKQ15262 1439 aa24.69■■□□□ 1.54
USHBP1-203ENST00000431146 SHROOM2Q13796 1616 aa24.69■■□□□ 1.54
USHBP1-203ENST00000431146 CDK11AQ9UQ88 783 aaPredicted RBP24.68■■□□□ 1.54
USHBP1-203ENST00000431146 PTPRGP23470 1445 aa24.67■■□□□ 1.54
USHBP1-203ENST00000431146 ERCC6L2Q5T890 1561 aa24.66■■□□□ 1.54
USHBP1-203ENST00000431146 TROQ12816 1431 aaPredicted RBP24.63■■□□□ 1.53
USHBP1-203ENST00000431146 TCOF1Q13428 1488 aaKnown RBP24.62■■□□□ 1.53
USHBP1-203ENST00000431146 ATP10BO94823 1461 aa24.6■■□□□ 1.53
USHBP1-203ENST00000431146 KIF14Q15058 1648 aa24.6■■□□□ 1.53
USHBP1-203ENST00000431146 CLSPNQ9HAW4 1339 aa24.6■■□□□ 1.53
USHBP1-203ENST00000431146 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
USHBP1-203ENST00000431146 MIA2Q96PC5 1412 aa24.59■■□□□ 1.53
USHBP1-203ENST00000431146 CHIC2Q9UKJ5 165 aa24.56■■□□□ 1.52
USHBP1-203ENST00000431146 ZNF644Q9H582 1327 aaPredicted RBP24.54■■□□□ 1.52
USHBP1-203ENST00000431146 ADCY10Q96PN6 1610 aa24.54■■□□□ 1.52
USHBP1-203ENST00000431146 PLEKHD1A6NEE1 506 aa24.53■■□□□ 1.52
USHBP1-203ENST00000431146 HFM1A2PYH4 1435 aa24.53■■□□□ 1.52
USHBP1-203ENST00000431146 MAPKBP1O60336 1514 aa24.53■■□□□ 1.52
USHBP1-203ENST00000431146 NAIPQ13075 1403 aa24.51■■□□□ 1.51
USHBP1-203ENST00000431146 UACAQ9BZF9 1416 aa24.51■■□□□ 1.51
USHBP1-203ENST00000431146 RRP7BPQ9NSQ0 103 aa24.5■■□□□ 1.51
USHBP1-203ENST00000431146 GPATCH8Q9UKJ3 1502 aaKnown RBP24.48■■□□□ 1.51
USHBP1-203ENST00000431146 ITSN2Q9NZM3 1697 aa24.47■■□□□ 1.51
USHBP1-203ENST00000431146 CFDP1Q9UEE9 299 aaPredicted RBP24.46■■□□□ 1.51
USHBP1-203ENST00000431146 ZNF777Q9ULD5 760 aaPredicted RBP24.44■■□□□ 1.5
USHBP1-203ENST00000431146 DAPK1P53355 1430 aa24.43■■□□□ 1.5
USHBP1-203ENST00000431146 CAMSAP2Q08AD1 1489 aa24.42■■□□□ 1.5
USHBP1-203ENST00000431146 CDC42BPAQ5VT25 1732 aa24.42■■□□□ 1.5
USHBP1-203ENST00000431146 DNMT1P26358 1616 aaKnown RBP24.42■■□□□ 1.5
USHBP1-203ENST00000431146 ABCC2Q92887 1545 aa24.41■■□□□ 1.5
USHBP1-203ENST00000431146 ABCC10Q5T3U5 1492 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms