RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 CUX2O14529 1486 aa6.34□□□□□ -1.4
R3HDM1-206ENST00000429703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.34□□□□□ -1.4
R3HDM1-206ENST00000429703 KLHL34Q8N239 644 aa6.34□□□□□ -1.4
R3HDM1-206ENST00000429703 ZMYND15Q9H091 742 aa6.34□□□□□ -1.4
R3HDM1-206ENST00000429703 SUPT5HO00267 1087 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-206ENST00000429703 BAZ1AQ9NRL2 1556 aaPredicted RBP6.32□□□□□ -1.4
R3HDM1-206ENST00000429703 ZNF316A6NFI3 1004 aaPredicted RBP6.32□□□□□ -1.4
R3HDM1-206ENST00000429703 AAMPQ13685 434 aa6.32□□□□□ -1.4
R3HDM1-206ENST00000429703 PDIA4P13667 645 aaKnown RBP6.31□□□□□ -1.4
R3HDM1-206ENST00000429703 PDE4CQ08493 712 aa6.31□□□□□ -1.4
R3HDM1-206ENST00000429703 PRDM2Q13029 1718 aa6.3□□□□□ -1.4
R3HDM1-206ENST00000429703 PABPN1Q86U42 306 aaKnown RBP eCLIP6.3□□□□□ -1.4
R3HDM1-206ENST00000429703 HAP1P54257 671 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-206ENST00000429703 LAMC3Q9Y6N6 1575 aa6.29□□□□□ -1.4
R3HDM1-206ENST00000429703 BCL11BQ9C0K0 894 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-206ENST00000429703 THOC2Q8NI27 1593 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-206ENST00000429703 ATAD2BQ9ULI0 1458 aa6.28□□□□□ -1.4
R3HDM1-206ENST00000429703 NEFLP07196 543 aa6.27□□□□□ -1.41
R3HDM1-206ENST00000429703 RBM10P98175 930 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-206ENST00000429703 FBXO3Q9UK99 471 aa6.26□□□□□ -1.41
R3HDM1-206ENST00000429703 SAMD1Q6SPF0 538 aaPredicted RBP6.25□□□□□ -1.41
R3HDM1-206ENST00000429703 A0A0U1RQG5 324 aaPredicted RBP6.25□□□□□ -1.41
R3HDM1-206ENST00000429703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.25□□□□□ -1.413e-7■□□□□ 8.6
R3HDM1-206ENST00000429703 BCANQ96GW7 911 aa6.24□□□□□ -1.41
R3HDM1-206ENST00000429703 CCER1Q8TC90 406 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-206ENST00000429703 TIMELESSQ9UNS1 1208 aa6.24□□□□□ -1.41
R3HDM1-206ENST00000429703 HNRNPUL2Q1KMD3 747 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-206ENST00000429703 DCAF8L2P0C7V8 631 aa6.23□□□□□ -1.41
R3HDM1-206ENST00000429703 C11orf95C9JLR9 678 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-206ENST00000429703 U3KPZ7 1027 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-206ENST00000429703 DCAF8L1A6NGE4 600 aa6.22□□□□□ -1.41
R3HDM1-206ENST00000429703 RSPH6AQ9H0K4 717 aa6.22□□□□□ -1.41
R3HDM1-206ENST00000429703 TAOK2Q9UL54 1235 aa6.21□□□□□ -1.41
R3HDM1-206ENST00000429703 SPDYE4A6NLX3 237 aa6.21□□□□□ -1.42
R3HDM1-206ENST00000429703 VASPP50552 380 aaPredicted RBP6.21□□□□□ -1.42
R3HDM1-206ENST00000429703 VSIG10Q8N0Z9 540 aa6.21□□□□□ -1.42
R3HDM1-206ENST00000429703 PAK3O75914 559 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-206ENST00000429703 ZNF219Q9P2Y4 722 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-206ENST00000429703 WASHC2AQ641Q2 1341 aa6.19□□□□□ -1.42
R3HDM1-206ENST00000429703 WDR62O43379 1518 aa6.19□□□□□ -1.42
R3HDM1-206ENST00000429703 WASHC2CQ9Y4E1 1318 aa6.19□□□□□ -1.42
R3HDM1-206ENST00000429703 ITGAEP38570 1179 aa6.19□□□□□ -1.42
R3HDM1-206ENST00000429703 KIF21AQ7Z4S6 1674 aa6.18□□□□□ -1.42
R3HDM1-206ENST00000429703 IFNLR1Q8IU57 520 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-206ENST00000429703 NBR1Q14596 966 aa6.17□□□□□ -1.42
R3HDM1-206ENST00000429703 BAZ1BQ9UIG0 1483 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-206ENST00000429703 PROM2Q8N271 834 aa6.16□□□□□ -1.42
R3HDM1-206ENST00000429703 PKD2Q13563 968 aa6.16□□□□□ -1.42
R3HDM1-206ENST00000429703 MROH2BQ7Z745 1585 aa6.15□□□□□ -1.42
R3HDM1-206ENST00000429703 ARXQ96QS3 562 aa6.15□□□□□ -1.42
R3HDM1-206ENST00000429703 WDR97A6NE52 1622 aa6.15□□□□□ -1.43
R3HDM1-206ENST00000429703 TOP2AP11388 1531 aaKnown RBP6.15□□□□□ -1.43
R3HDM1-206ENST00000429703 TAF7LQ5H9L4 462 aa6.15□□□□□ -1.43
R3HDM1-206ENST00000429703 MKRN4PQ13434 485 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-206ENST00000429703 BRPF3Q9ULD4 1205 aa6.14□□□□□ -1.43
R3HDM1-206ENST00000429703 PRDM4Q9UKN5 801 aa6.14□□□□□ -1.43
R3HDM1-206ENST00000429703 KCNH8Q96L42 1107 aa6.13□□□□□ -1.43
R3HDM1-206ENST00000429703 TPRNQ4KMQ1 711 aa6.12□□□□□ -1.43
R3HDM1-206ENST00000429703 NOP58Q9Y2X3 529 aaKnown RBP6.12□□□□□ -1.43
R3HDM1-206ENST00000429703 KDM2AQ9Y2K7 1162 aa6.12□□□□□ -1.43
R3HDM1-206ENST00000429703 RSPH4AQ5TD94 716 aa6.1□□□□□ -1.43
R3HDM1-206ENST00000429703 WIZO95785 1651 aa6.1□□□□□ -1.43
R3HDM1-206ENST00000429703 RANGAP1P46060 587 aaPredicted RBP6.09□□□□□ -1.43
R3HDM1-206ENST00000429703 FBLN2P98095 1184 aa6.09□□□□□ -1.43
R3HDM1-206ENST00000429703 GLIPR1L2Q4G1C9 344 aa6.09□□□□□ -1.43
R3HDM1-206ENST00000429703 MRC2Q9UBG0 1479 aa6.09□□□□□ -1.43
R3HDM1-206ENST00000429703 CFTRP13569 1480 aa6.09□□□□□ -1.43
R3HDM1-206ENST00000429703 PAXIP1Q6ZW49 1069 aaPredicted RBP6.08□□□□□ -1.44
R3HDM1-206ENST00000429703 PDS5BQ9NTI5 1447 aa6.08□□□□□ -1.44
R3HDM1-206ENST00000429703 GTF2E1P29083 439 aaPredicted RBP6.07□□□□□ -1.44
R3HDM1-206ENST00000429703 BBXQ8WY36 941 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-206ENST00000429703 NPM1P06748 294 aaKnown RBP eCLIP6.06□□□□□ -1.44
R3HDM1-206ENST00000429703 CADPSQ9ULU8 1353 aa6.05□□□□□ -1.44
R3HDM1-206ENST00000429703 NAP1L2Q9ULW6 460 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-206ENST00000429703 DHX37Q8IY37 1157 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-206ENST00000429703 CFAP44Q96MT7 982 aa6.04□□□□□ -1.44
R3HDM1-206ENST00000429703 ERCC6Q03468 1493 aa6.04□□□□□ -1.44
R3HDM1-206ENST00000429703 FAM43AQ8N2R8 423 aa6.04□□□□□ -1.44
R3HDM1-206ENST00000429703 NESP48681 1621 aa6.04□□□□□ -1.44
R3HDM1-206ENST00000429703 CHMP4BQ9H444 224 aaKnown RBP6.03□□□□□ -1.44
R3HDM1-206ENST00000429703 RRP9O43818 475 aaKnown RBP6.03□□□□□ -1.44
R3HDM1-206ENST00000429703 CHMP4AQ9BY43 222 aa6.02□□□□□ -1.45
R3HDM1-206ENST00000429703 ECM2O94769 699 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-206ENST00000429703 DCAF11Q8TEB1 546 aa6.02□□□□□ -1.45
R3HDM1-206ENST00000429703 STAC3Q96MF2 364 aa6.02□□□□□ -1.45
R3HDM1-206ENST00000429703 ABCC8Q09428 1581 aa6.02□□□□□ -1.45
R3HDM1-206ENST00000429703 RSF1Q96T23 1441 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-206ENST00000429703 CEP164Q9UPV0 1460 aa6.01□□□□□ -1.45
R3HDM1-206ENST00000429703 RGS3P49796 1198 aa6□□□□□ -1.45
R3HDM1-206ENST00000429703 RRAGDQ9NQL2 400 aaPredicted RBP6□□□□□ -1.45
R3HDM1-206ENST00000429703 CDK11AQ9UQ88 783 aaPredicted RBP6□□□□□ -1.45
R3HDM1-206ENST00000429703 DNMBPQ6XZF7 1577 aa5.99□□□□□ -1.45
R3HDM1-206ENST00000429703 IPO9Q96P70 1041 aaKnown RBP5.99□□□□□ -1.45
R3HDM1-206ENST00000429703 TARBP1Q13395 1621 aaKnown RBP5.99□□□□□ -1.45
R3HDM1-206ENST00000429703 CALD1Q05682 793 aaKnown RBP5.99□□□□□ -1.45
R3HDM1-206ENST00000429703 HSP90AA2PQ14568 343 aaPredicted RBP5.99□□□□□ -1.45
R3HDM1-206ENST00000429703 SPOCK2Q92563 424 aa5.99□□□□□ -1.45
R3HDM1-206ENST00000429703 RTL5Q5HYW3 569 aaPredicted RBP5.99□□□□□ -1.45
R3HDM1-206ENST00000429703 IPO4Q8TEX9 1081 aaKnown RBP5.99□□□□□ -1.45
R3HDM1-206ENST00000429703 CHRM1P11229 460 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms