RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
ALMS1P1-201ENST00000428767 KDM4FA0A1W2PPD8 638 aa21.28■■□□□ 1
ALMS1P1-201ENST00000428767 ILDR1Q86SU0 546 aaPredicted RBP21.28■■□□□ 1
ALMS1P1-201ENST00000428767 ERICH3Q5RHP9 1530 aa21.27■■□□□ 1
ALMS1P1-201ENST00000428767 MAPKBP1O60336 1514 aa21.25■□□□□ 0.99
ALMS1P1-201ENST00000428767 TOP2BQ02880 1626 aa21.25■□□□□ 0.99
ALMS1P1-201ENST00000428767 ADCY10Q96PN6 1610 aa21.25■□□□□ 0.99
ALMS1P1-201ENST00000428767 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
ALMS1P1-201ENST00000428767 NPM1P06748 294 aaKnown RBP eCLIP21.22■□□□□ 0.99
ALMS1P1-201ENST00000428767 JPH4Q96JJ6 628 aa21.22■□□□□ 0.99
ALMS1P1-201ENST00000428767 ADGRL1O94910 1474 aa21.02■□□□□ 0.96
ALMS1P1-201ENST00000428767 PPRC1Q5VV67 1664 aaKnown RBP21.02■□□□□ 0.95
ALMS1P1-201ENST00000428767 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
ALMS1P1-201ENST00000428767 KIAA0586Q9BVV6 1533 aa20.97■□□□□ 0.95
ALMS1P1-201ENST00000428767 TTBK1Q5TCY1 1321 aaPredicted RBP20.97■□□□□ 0.95
ALMS1P1-201ENST00000428767 HECW2Q9P2P5 1572 aa20.96■□□□□ 0.95
ALMS1P1-201ENST00000428767 CUL7Q14999 1698 aa20.94■□□□□ 0.94
ALMS1P1-201ENST00000428767 PTPRGP23470 1445 aa20.9■□□□□ 0.94
ALMS1P1-201ENST00000428767 ABCC2Q92887 1545 aa20.89■□□□□ 0.94
ALMS1P1-201ENST00000428767 ASXL2Q76L83 1435 aa20.89■□□□□ 0.94
ALMS1P1-201ENST00000428767 GLI2P10070 1586 aa20.89■□□□□ 0.93
ALMS1P1-201ENST00000428767 PLB1Q6P1J6 1458 aa20.85■□□□□ 0.93
ALMS1P1-201ENST00000428767 COL17A1Q9UMD9 1497 aaPredicted RBP20.84■□□□□ 0.93
ALMS1P1-201ENST00000428767 IGF1RP08069 1367 aa20.82■□□□□ 0.92
ALMS1P1-201ENST00000428767 MAP3K4Q9Y6R4 1608 aa20.82■□□□□ 0.92
ALMS1P1-201ENST00000428767 TNIKQ9UKE5 1360 aa20.81■□□□□ 0.92
ALMS1P1-201ENST00000428767 CARMIL2Q6F5E8 1435 aa20.79■□□□□ 0.92
ALMS1P1-201ENST00000428767 EPRSP07814 1512 aaKnown RBP20.77■□□□□ 0.92
ALMS1P1-201ENST00000428767 KIF27Q86VH2 1401 aa20.77■□□□□ 0.91
ALMS1P1-201ENST00000428767 IQGAP2Q13576 1575 aa20.76■□□□□ 0.91
ALMS1P1-201ENST00000428767 UHRF1BP1LA0JNW5 1464 aa20.75■□□□□ 0.91
ALMS1P1-201ENST00000428767 ZCCHC11Q5TAX3 1644 aaKnown RBP20.74■□□□□ 0.91
ALMS1P1-201ENST00000428767 TEX14Q8IWB6 1497 aa20.74■□□□□ 0.91
ALMS1P1-201ENST00000428767 UACAQ9BZF9 1416 aa20.72■□□□□ 0.91
ALMS1P1-201ENST00000428767 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
ALMS1P1-201ENST00000428767 DISP1Q96F81 1524 aa20.68■□□□□ 0.9
ALMS1P1-201ENST00000428767 KDM5BQ9UGL1 1544 aa20.68■□□□□ 0.9
ALMS1P1-201ENST00000428767 KIF21BO75037 1637 aa20.64■□□□□ 0.89
ALMS1P1-201ENST00000428767 WDR7Q9Y4E6 1490 aa20.59■□□□□ 0.89
ALMS1P1-201ENST00000428767 KIAA0556O60303 1618 aa20.59■□□□□ 0.89
ALMS1P1-201ENST00000428767 FBXO41Q8TF61 875 aa20.58■□□□□ 0.89
ALMS1P1-201ENST00000428767 CFAP43Q8NDM7 1665 aa20.58■□□□□ 0.88
ALMS1P1-201ENST00000428767 UGGT2Q9NYU1 1516 aa20.56■□□□□ 0.88
ALMS1P1-201ENST00000428767 CD109Q6YHK3 1445 aa20.52■□□□□ 0.87
ALMS1P1-201ENST00000428767 MAGI3Q5TCQ9 1506 aa20.51■□□□□ 0.87
ALMS1P1-201ENST00000428767 KCNH8Q96L42 1107 aa20.47■□□□□ 0.87
ALMS1P1-201ENST00000428767 CTTNBP2Q8WZ74 1663 aa20.45■□□□□ 0.86
ALMS1P1-201ENST00000428767 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
ALMS1P1-201ENST00000428767 ADAMTSL3P82987 1691 aa20.42■□□□□ 0.86
ALMS1P1-201ENST00000428767 PTPRMP28827 1452 aa20.42■□□□□ 0.86
ALMS1P1-201ENST00000428767 ABCA8O94911 1581 aa20.41■□□□□ 0.86
ALMS1P1-201ENST00000428767 MADDQ8WXG6 1647 aa20.36■□□□□ 0.85
ALMS1P1-201ENST00000428767 ARAP3Q8WWN8 1544 aa20.36■□□□□ 0.85
ALMS1P1-201ENST00000428767 PCF11O94913 1555 aaKnown RBP20.35■□□□□ 0.85
ALMS1P1-201ENST00000428767 BCORL1Q5H9F3 1711 aa20.35■□□□□ 0.85
ALMS1P1-201ENST00000428767 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
ALMS1P1-201ENST00000428767 ARID3CA6NKF2 412 aa20.31■□□□□ 0.84
ALMS1P1-201ENST00000428767 LMTK3Q96Q04 1460 aa20.3■□□□□ 0.84
ALMS1P1-201ENST00000428767 RIMS1Q86UR5 1692 aaKnown RBP20.29■□□□□ 0.84
ALMS1P1-201ENST00000428767 ABCA9Q8IUA7 1624 aa20.28■□□□□ 0.84
ALMS1P1-201ENST00000428767 RAPGEF3O95398 923 aa20.26■□□□□ 0.83
ALMS1P1-201ENST00000428767 FRMPD1Q5SYB0 1578 aa20.25■□□□□ 0.83
ALMS1P1-201ENST00000428767 ARID4BQ4LE39 1312 aaPredicted RBP20.25■□□□□ 0.83
ALMS1P1-201ENST00000428767 ATP10BO94823 1461 aa20.2■□□□□ 0.82
ALMS1P1-201ENST00000428767 HSPA2P54652 639 aa20.19■□□□□ 0.82
ALMS1P1-201ENST00000428767 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
ALMS1P1-201ENST00000428767 PHLDB1Q86UU1 1377 aa20.19■□□□□ 0.82
ALMS1P1-201ENST00000428767 ARHGEF40Q8TER5 1519 aa20.18■□□□□ 0.82
ALMS1P1-201ENST00000428767 NEO1Q92859 1461 aa20.18■□□□□ 0.82
ALMS1P1-201ENST00000428767 P3H3Q8IVL6 736 aa20.15■□□□□ 0.82
ALMS1P1-201ENST00000428767 RICTORQ6R327 1708 aa20.13■□□□□ 0.81
ALMS1P1-201ENST00000428767 CERKQ8TCT0 537 aa20.11■□□□□ 0.81
ALMS1P1-201ENST00000428767 RAPGEF6Q8TEU7 1601 aa20.11■□□□□ 0.81
ALMS1P1-201ENST00000428767 SIGLEC1Q9BZZ2 1709 aa20.1■□□□□ 0.81
ALMS1P1-201ENST00000428767 FER1L4A9Z1Z3 1794 aa20.08■□□□□ 0.81
ALMS1P1-201ENST00000428767 ILDR2Q71H61 639 aa20.08■□□□□ 0.81
ALMS1P1-201ENST00000428767 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.8
ALMS1P1-201ENST00000428767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
ALMS1P1-201ENST00000428767 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
ALMS1P1-201ENST00000428767 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
ALMS1P1-201ENST00000428767 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
ALMS1P1-201ENST00000428767 DENND4BO75064 1496 aaPredicted RBP20.05■□□□□ 0.8
ALMS1P1-201ENST00000428767 FANCAO15360 1455 aa20.05■□□□□ 0.8
ALMS1P1-201ENST00000428767 SAMD9Q5K651 1589 aa20.04■□□□□ 0.8
ALMS1P1-201ENST00000428767 CFAP74Q9C0B2 1584 aa20.03■□□□□ 0.8
ALMS1P1-201ENST00000428767 POGZQ7Z3K3 1410 aa20.02■□□□□ 0.79
ALMS1P1-201ENST00000428767 AKNAQ7Z591 1439 aa20.02■□□□□ 0.79
ALMS1P1-201ENST00000428767 ZFYVE16Q7Z3T8 1539 aa20.01■□□□□ 0.79
ALMS1P1-201ENST00000428767 SOCS7O14512 581 aa20■□□□□ 0.79
ALMS1P1-201ENST00000428767 MLECQ14165 292 aa20■□□□□ 0.79
ALMS1P1-201ENST00000428767 YEATS2Q9ULM3 1422 aa20■□□□□ 0.79
ALMS1P1-201ENST00000428767 TTC37Q6PGP7 1564 aa20■□□□□ 0.79
ALMS1P1-201ENST00000428767 NUP153P49790 1475 aaKnown RBP19.99■□□□□ 0.79
ALMS1P1-201ENST00000428767 ZMYM4Q5VZL5 1548 aa19.99■□□□□ 0.79
ALMS1P1-201ENST00000428767 EFCAB5A4FU69 1503 aa19.98■□□□□ 0.79
ALMS1P1-201ENST00000428767 PREX1Q8TCU6 1659 aa19.98■□□□□ 0.79
ALMS1P1-201ENST00000428767 FHOD3Q2V2M9 1422 aa19.98■□□□□ 0.79
ALMS1P1-201ENST00000428767 SPATA31D1Q6ZQQ2 1576 aa19.96■□□□□ 0.79
ALMS1P1-201ENST00000428767 HECW1Q76N89 1606 aa19.94■□□□□ 0.78
ALMS1P1-201ENST00000428767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms