RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 ABCC10Q5T3U5 1492 aa14.84□□□□□ -0.03
ITSN1-216ENST00000428240 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
ITSN1-216ENST00000428240 KDM4FA0A1W2PPD8 638 aa14.8□□□□□ -0.04
ITSN1-216ENST00000428240 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
ITSN1-216ENST00000428240 MAPKBP1O60336 1514 aa14.79□□□□□ -0.04
ITSN1-216ENST00000428240 DIP2BQ9P265 1576 aa14.79□□□□□ -0.04
ITSN1-216ENST00000428240 RUSC2Q8N2Y8 1516 aa14.78□□□□□ -0.04
ITSN1-216ENST00000428240 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.05
ITSN1-216ENST00000428240 KDM6BO15054 1643 aa14.74□□□□□ -0.05
ITSN1-216ENST00000428240 ILDR1Q86SU0 546 aaPredicted RBP14.69□□□□□ -0.06
ITSN1-216ENST00000428240 KIAA0586Q9BVV6 1533 aa14.67□□□□□ -0.06
ITSN1-216ENST00000428240 TSPOAP1O95153 1857 aa14.66□□□□□ -0.06
ITSN1-216ENST00000428240 IGF1RP08069 1367 aa14.64□□□□□ -0.07
ITSN1-216ENST00000428240 TTBK1Q5TCY1 1321 aaPredicted RBP14.63□□□□□ -0.07
ITSN1-216ENST00000428240 PTPRGP23470 1445 aa14.61□□□□□ -0.07
ITSN1-216ENST00000428240 ASXL2Q76L83 1435 aa14.58□□□□□ -0.08
ITSN1-216ENST00000428240 ABCC2Q92887 1545 aa14.57□□□□□ -0.08
ITSN1-216ENST00000428240 KIF27Q86VH2 1401 aa14.57□□□□□ -0.08
ITSN1-216ENST00000428240 ADGRL1O94910 1474 aa14.57□□□□□ -0.08
ITSN1-216ENST00000428240 CUL7Q14999 1698 aa14.56□□□□□ -0.08
ITSN1-216ENST00000428240 PPRC1Q5VV67 1664 aaKnown RBP14.56□□□□□ -0.08
ITSN1-216ENST00000428240 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
ITSN1-216ENST00000428240 COL17A1Q9UMD9 1497 aaPredicted RBP14.55□□□□□ -0.08
ITSN1-216ENST00000428240 GLI2P10070 1586 aa14.55□□□□□ -0.08
ITSN1-216ENST00000428240 PLB1Q6P1J6 1458 aa14.54□□□□□ -0.08
ITSN1-216ENST00000428240 CARMIL2Q6F5E8 1435 aa14.52□□□□□ -0.08
ITSN1-216ENST00000428240 CARMIL1Q5VZK9 1371 aa14.52□□□□□ -0.08
ITSN1-216ENST00000428240 UHRF1BP1LA0JNW5 1464 aa14.5□□□□□ -0.09
ITSN1-216ENST00000428240 UACAQ9BZF9 1416 aa14.49□□□□□ -0.09
ITSN1-216ENST00000428240 EPRSP07814 1512 aaKnown RBP14.48□□□□□ -0.09
ITSN1-216ENST00000428240 IQGAP2Q13576 1575 aa14.47□□□□□ -0.09
ITSN1-216ENST00000428240 HECW2Q9P2P5 1572 aa14.47□□□□□ -0.09
ITSN1-216ENST00000428240 DISP1Q96F81 1524 aa14.47□□□□□ -0.09
ITSN1-216ENST00000428240 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.1
ITSN1-216ENST00000428240 MAP3K4Q9Y6R4 1608 aa14.45□□□□□ -0.1
ITSN1-216ENST00000428240 TEX14Q8IWB6 1497 aa14.42□□□□□ -0.1
ITSN1-216ENST00000428240 ZCCHC11Q5TAX3 1644 aaKnown RBP14.41□□□□□ -0.1
ITSN1-216ENST00000428240 UGGT2Q9NYU1 1516 aa14.38□□□□□ -0.11
ITSN1-216ENST00000428240 KIAA0556O60303 1618 aa14.36□□□□□ -0.11
ITSN1-216ENST00000428240 WDR7Q9Y4E6 1490 aa14.36□□□□□ -0.11
ITSN1-216ENST00000428240 RAPGEF2Q9Y4G8 1499 aa14.33□□□□□ -0.12
ITSN1-216ENST00000428240 CD109Q6YHK3 1445 aa14.32□□□□□ -0.12
ITSN1-216ENST00000428240 KCNH8Q96L42 1107 aa14.31□□□□□ -0.12
ITSN1-216ENST00000428240 MAGI3Q5TCQ9 1506 aa14.31□□□□□ -0.12
ITSN1-216ENST00000428240 CFAP43Q8NDM7 1665 aa14.26□□□□□ -0.13
ITSN1-216ENST00000428240 FBXO41Q8TF61 875 aa14.26□□□□□ -0.13
ITSN1-216ENST00000428240 KIF21BO75037 1637 aa14.26□□□□□ -0.13
ITSN1-216ENST00000428240 ABCA8O94911 1581 aa14.26□□□□□ -0.13
ITSN1-216ENST00000428240 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
ITSN1-216ENST00000428240 GOLGA3Q08378 1498 aa14.2□□□□□ -0.14
ITSN1-216ENST00000428240 ARID3CA6NKF2 412 aa14.2□□□□□ -0.14
ITSN1-216ENST00000428240 PTPRMP28827 1452 aa14.19□□□□□ -0.14
ITSN1-216ENST00000428240 CTTNBP2Q8WZ74 1663 aa14.19□□□□□ -0.14
ITSN1-216ENST00000428240 RAPGEF3O95398 923 aa14.17□□□□□ -0.14
ITSN1-216ENST00000428240 ATP10BO94823 1461 aa14.16□□□□□ -0.14
ITSN1-216ENST00000428240 ADAMTSL3P82987 1691 aa14.16□□□□□ -0.14
ITSN1-216ENST00000428240 P3H3Q8IVL6 736 aa14.14□□□□□ -0.15
ITSN1-216ENST00000428240 PRXQ9BXM0 1461 aa14.12□□□□□ -0.15
ITSN1-216ENST00000428240 ABCA9Q8IUA7 1624 aa14.12□□□□□ -0.15
ITSN1-216ENST00000428240 PHLDB1Q86UU1 1377 aa14.11□□□□□ -0.15
ITSN1-216ENST00000428240 LMTK3Q96Q04 1460 aa14.11□□□□□ -0.15
ITSN1-216ENST00000428240 PCF11O94913 1555 aaKnown RBP14.1□□□□□ -0.15
ITSN1-216ENST00000428240 FRMPD1Q5SYB0 1578 aa14.09□□□□□ -0.15
ITSN1-216ENST00000428240 MADDQ8WXG6 1647 aa14.09□□□□□ -0.15
ITSN1-216ENST00000428240 BCORL1Q5H9F3 1711 aa14.09□□□□□ -0.15
ITSN1-216ENST00000428240 ARID4BQ4LE39 1312 aaPredicted RBP14.09□□□□□ -0.15
ITSN1-216ENST00000428240 NEO1Q92859 1461 aa14.08□□□□□ -0.16
ITSN1-216ENST00000428240 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
ITSN1-216ENST00000428240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
ITSN1-216ENST00000428240 HSPA2P54652 639 aa14.04□□□□□ -0.16
ITSN1-216ENST00000428240 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
ITSN1-216ENST00000428240 PLPPR3Q6T4P5 718 aa14.02□□□□□ -0.17
ITSN1-216ENST00000428240 RIMS1Q86UR5 1692 aaKnown RBP14.01□□□□□ -0.17
ITSN1-216ENST00000428240 RAPGEF6Q8TEU7 1601 aa14.01□□□□□ -0.17
ITSN1-216ENST00000428240 SAMD9Q5K651 1589 aa14□□□□□ -0.17
ITSN1-216ENST00000428240 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
ITSN1-216ENST00000428240 DENND4BO75064 1496 aaPredicted RBP13.99□□□□□ -0.17
ITSN1-216ENST00000428240 NUP153P49790 1475 aaKnown RBP13.99□□□□□ -0.17
ITSN1-216ENST00000428240 AKNAQ7Z591 1439 aa13.98□□□□□ -0.17
ITSN1-216ENST00000428240 CERKQ8TCT0 537 aa13.97□□□□□ -0.17
ITSN1-216ENST00000428240 RICTORQ6R327 1708 aa13.97□□□□□ -0.17
ITSN1-216ENST00000428240 FHOD3Q2V2M9 1422 aa13.97□□□□□ -0.17
ITSN1-216ENST00000428240 SIGLEC1Q9BZZ2 1709 aa13.96□□□□□ -0.17
ITSN1-216ENST00000428240 YEATS2Q9ULM3 1422 aa13.96□□□□□ -0.18
ITSN1-216ENST00000428240 FANCAO15360 1455 aa13.95□□□□□ -0.18
ITSN1-216ENST00000428240 RANGAP1P46060 587 aaPredicted RBP13.95□□□□□ -0.18
ITSN1-216ENST00000428240 PLEKHD1A6NEE1 506 aa13.94□□□□□ -0.18
ITSN1-216ENST00000428240 MLECQ14165 292 aa13.94□□□□□ -0.18
ITSN1-216ENST00000428240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
ITSN1-216ENST00000428240 POGZQ7Z3K3 1410 aa13.93□□□□□ -0.18
ITSN1-216ENST00000428240 ZMYM4Q5VZL5 1548 aa13.92□□□□□ -0.18
ITSN1-216ENST00000428240 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
ITSN1-216ENST00000428240 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
ITSN1-216ENST00000428240 TTC37Q6PGP7 1564 aa13.91□□□□□ -0.18
ITSN1-216ENST00000428240 CFAP74Q9C0B2 1584 aa13.9□□□□□ -0.18
ITSN1-216ENST00000428240 EFCAB5A4FU69 1503 aa13.9□□□□□ -0.19
ITSN1-216ENST00000428240 ILDR2Q71H61 639 aa13.89□□□□□ -0.19
ITSN1-216ENST00000428240 HECW1Q76N89 1606 aa13.89□□□□□ -0.19
ITSN1-216ENST00000428240 MAGI2Q86UL8 1455 aa13.88□□□□□ -0.19
ITSN1-216ENST00000428240 CEBPAP49715 358 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms