RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 P3H3Q8IVL6 736 aa26.16■■□□□ 1.78
PRDM5-203ENST00000428209 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
PRDM5-203ENST00000428209 EFCAB5A4FU69 1503 aa26.1■■□□□ 1.77
PRDM5-203ENST00000428209 AQRO60306 1485 aaKnown RBP eCLIP26.09■■□□□ 1.77
PRDM5-203ENST00000428209 WDR62O43379 1518 aa26.08■■□□□ 1.77
PRDM5-203ENST00000428209 FHOD3Q2V2M9 1422 aa26.07■■□□□ 1.76
PRDM5-203ENST00000428209 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
PRDM5-203ENST00000428209 MAP3K1Q13233 1512 aa26.05■■□□□ 1.76
PRDM5-203ENST00000428209 TIAM1Q13009 1591 aa26.04■■□□□ 1.76
PRDM5-203ENST00000428209 IFT140Q96RY7 1462 aa26.03■■□□□ 1.76
PRDM5-203ENST00000428209 PCF11O94913 1555 aaKnown RBP26■■□□□ 1.75
PRDM5-203ENST00000428209 THOC2Q8NI27 1593 aaKnown RBP26■■□□□ 1.75
PRDM5-203ENST00000428209 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
PRDM5-203ENST00000428209 GRIN2BQ13224 1484 aa25.99■■□□□ 1.75
PRDM5-203ENST00000428209 RRBP1Q9P2E9 1410 aaKnown RBP25.97■■□□□ 1.75
PRDM5-203ENST00000428209 ZNF608Q9ULD9 1512 aaPredicted RBP25.96■■□□□ 1.75
PRDM5-203ENST00000428209 LRRC9Q6ZRR7 1453 aa25.94■■□□□ 1.74
PRDM5-203ENST00000428209 ADAMTS12P58397 1594 aa25.94■■□□□ 1.74
PRDM5-203ENST00000428209 FYCO1Q9BQS8 1478 aa25.93■■□□□ 1.74
PRDM5-203ENST00000428209 FMN1Q68DA7 1419 aa25.93■■□□□ 1.74
PRDM5-203ENST00000428209 CASKIN1Q8WXD9 1431 aa25.93■■□□□ 1.74
PRDM5-203ENST00000428209 SAMD9Q5K651 1589 aa25.92■■□□□ 1.74
PRDM5-203ENST00000428209 CCNB3Q8WWL7 1395 aa25.9■■□□□ 1.74
PRDM5-203ENST00000428209 CFAP43Q8NDM7 1665 aa25.9■■□□□ 1.74
PRDM5-203ENST00000428209 SNAPC4Q5SXM2 1469 aa25.82■■□□□ 1.72
PRDM5-203ENST00000428209 EIF4G3O43432 1585 aaKnown RBP25.81■■□□□ 1.72
PRDM5-203ENST00000428209 IQGAP2Q13576 1575 aa25.81■■□□□ 1.72
PRDM5-203ENST00000428209 PHLDB1Q86UU1 1377 aa25.78■■□□□ 1.72
PRDM5-203ENST00000428209 ITGAEP38570 1179 aa25.75■■□□□ 1.71
PRDM5-203ENST00000428209 GRIN2AQ12879 1464 aa25.69■■□□□ 1.7
PRDM5-203ENST00000428209 MTUS2Q5JR59 1369 aa25.67■■□□□ 1.7
PRDM5-203ENST00000428209 MAGI1Q96QZ7 1491 aaPredicted RBP25.67■■□□□ 1.7
PRDM5-203ENST00000428209 KIAA0586Q9BVV6 1533 aa25.67■■□□□ 1.7
PRDM5-203ENST00000428209 FAM50AQ14320 339 aaKnown RBP25.66■■□□□ 1.7
PRDM5-203ENST00000428209 LRRIQ1Q96JM4 1722 aa25.66■■□□□ 1.7
PRDM5-203ENST00000428209 UGGT2Q9NYU1 1516 aa25.66■■□□□ 1.7
PRDM5-203ENST00000428209 CHMP7Q8WUX9 453 aaPredicted RBP25.64■■□□□ 1.69
PRDM5-203ENST00000428209 DHX57Q6P158 1386 aaKnown RBP25.62■■□□□ 1.69
PRDM5-203ENST00000428209 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
PRDM5-203ENST00000428209 CLSPNQ9HAW4 1339 aa25.59■■□□□ 1.69
PRDM5-203ENST00000428209 FBLN2P98095 1184 aa25.58■■□□□ 1.69
PRDM5-203ENST00000428209 CCDC18Q5T9S5 1454 aa25.57■■□□□ 1.68
PRDM5-203ENST00000428209 HECW1Q76N89 1606 aa25.56■■□□□ 1.68
PRDM5-203ENST00000428209 DISP1Q96F81 1524 aa25.53■■□□□ 1.68
PRDM5-203ENST00000428209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.53■■□□□ 1.68
PRDM5-203ENST00000428209 EHBP1L1Q8N3D4 1523 aa25.53■■□□□ 1.68
PRDM5-203ENST00000428209 FGD6Q6ZV73 1430 aa25.52■■□□□ 1.68
PRDM5-203ENST00000428209 KIAA0556O60303 1618 aa25.52■■□□□ 1.68
PRDM5-203ENST00000428209 RAB3GAP2Q9H2M9 1393 aa25.52■■□□□ 1.68
PRDM5-203ENST00000428209 NCOA2Q15596 1464 aa25.52■■□□□ 1.68
PRDM5-203ENST00000428209 CEP170Q5SW79 1584 aa25.5■■□□□ 1.67
PRDM5-203ENST00000428209 SUPT6HQ7KZ85 1726 aaKnown RBP25.5■■□□□ 1.67
PRDM5-203ENST00000428209 EPRSP07814 1512 aaKnown RBP25.5■■□□□ 1.67
PRDM5-203ENST00000428209 SETD5Q9C0A6 1442 aa25.5■■□□□ 1.67
PRDM5-203ENST00000428209 MAGI3Q5TCQ9 1506 aa25.47■■□□□ 1.67
PRDM5-203ENST00000428209 MYOM3Q5VTT5 1437 aa25.45■■□□□ 1.66
PRDM5-203ENST00000428209 ARID3CA6NKF2 412 aa25.44■■□□□ 1.66
PRDM5-203ENST00000428209 CDK13Q14004 1512 aaKnown RBP25.44■■□□□ 1.66
PRDM5-203ENST00000428209 NUP160Q12769 1436 aa25.44■■□□□ 1.66
PRDM5-203ENST00000428209 ZNF316A6NFI3 1004 aaPredicted RBP25.41■■□□□ 1.66
PRDM5-203ENST00000428209 JPH4Q96JJ6 628 aa25.4■■□□□ 1.66
PRDM5-203ENST00000428209 ARHGEF11O15085 1522 aa25.4■■□□□ 1.66
PRDM5-203ENST00000428209 DIEXFQ68CQ4 756 aaKnown RBP25.36■■□□□ 1.65
PRDM5-203ENST00000428209 RAPGEF6Q8TEU7 1601 aa25.36■■□□□ 1.65
PRDM5-203ENST00000428209 CARMIL2Q6F5E8 1435 aa25.35■■□□□ 1.65
PRDM5-203ENST00000428209 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
PRDM5-203ENST00000428209 PTPN23Q9H3S7 1636 aa25.32■■□□□ 1.64
PRDM5-203ENST00000428209 PTPRKQ15262 1439 aa25.29■■□□□ 1.64
PRDM5-203ENST00000428209 CDK11AQ9UQ88 783 aaPredicted RBP25.28■■□□□ 1.64
PRDM5-203ENST00000428209 MAPKBP1O60336 1514 aa25.27■■□□□ 1.64
PRDM5-203ENST00000428209 PLB1Q6P1J6 1458 aa25.26■■□□□ 1.63
PRDM5-203ENST00000428209 TCOF1Q13428 1488 aaKnown RBP25.24■■□□□ 1.63
PRDM5-203ENST00000428209 MIA2Q96PC5 1412 aa25.23■■□□□ 1.63
PRDM5-203ENST00000428209 HFM1A2PYH4 1435 aa25.23■■□□□ 1.63
PRDM5-203ENST00000428209 NAIPQ13075 1403 aa25.17■■□□□ 1.62
PRDM5-203ENST00000428209 CHD1O14646 1710 aa25.16■■□□□ 1.62
PRDM5-203ENST00000428209 TROQ12816 1431 aaPredicted RBP25.14■■□□□ 1.62
PRDM5-203ENST00000428209 PRG4Q92954 1404 aaPredicted RBP25.14■■□□□ 1.62
PRDM5-203ENST00000428209 CHIC2Q9UKJ5 165 aa25.13■■□□□ 1.61
PRDM5-203ENST00000428209 SIN3AQ96ST3 1273 aa25.11■■□□□ 1.61
PRDM5-203ENST00000428209 ABCA8O94911 1581 aa25.1■■□□□ 1.61
PRDM5-203ENST00000428209 RRP7BPQ9NSQ0 103 aa25.1■■□□□ 1.61
PRDM5-203ENST00000428209 NEUROD1Q13562 356 aa25.09■■□□□ 1.61
PRDM5-203ENST00000428209 UACAQ9BZF9 1416 aa25.09■■□□□ 1.61
PRDM5-203ENST00000428209 PTPRGP23470 1445 aa25.06■■□□□ 1.6
PRDM5-203ENST00000428209 PLEKHD1A6NEE1 506 aa25.04■■□□□ 1.6
PRDM5-203ENST00000428209 ZNF644Q9H582 1327 aaPredicted RBP25.03■■□□□ 1.6
PRDM5-203ENST00000428209 AKNAQ7Z591 1439 aa25.03■■□□□ 1.6
PRDM5-203ENST00000428209 ATP10BO94823 1461 aa25.03■■□□□ 1.6
PRDM5-203ENST00000428209 ADCY10Q96PN6 1610 aa25.02■■□□□ 1.6
PRDM5-203ENST00000428209 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.59
PRDM5-203ENST00000428209 CFDP1Q9UEE9 299 aaPredicted RBP25.01■■□□□ 1.59
PRDM5-203ENST00000428209 KIF14Q15058 1648 aa25.01■■□□□ 1.59
PRDM5-203ENST00000428209 TIMELESSQ9UNS1 1208 aa25.01■■□□□ 1.59
PRDM5-203ENST00000428209 DAPK1P53355 1430 aa25■■□□□ 1.59
PRDM5-203ENST00000428209 ITSN2Q9NZM3 1697 aa24.98■■□□□ 1.59
PRDM5-203ENST00000428209 GPATCH8Q9UKJ3 1502 aaKnown RBP24.98■■□□□ 1.59
PRDM5-203ENST00000428209 DNMT1P26358 1616 aaKnown RBP24.98■■□□□ 1.59
PRDM5-203ENST00000428209 ABCC5O15440 1437 aa24.97■■□□□ 1.59
PRDM5-203ENST00000428209 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms