RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 EFCAB5A4FU69 1503 aa33.29■■■□□ 2.92
CNEP1R1-202ENST00000427478 ZNF608Q9ULD9 1512 aaPredicted RBP33.27■■■□□ 2.92
CNEP1R1-202ENST00000427478 ADAMTS12P58397 1594 aa33.26■■■□□ 2.92
CNEP1R1-202ENST00000427478 GRIN2BQ13224 1484 aa33.24■■■□□ 2.91
CNEP1R1-202ENST00000427478 ZEB1P37275 1124 aaPredicted RBP33.22■■■□□ 2.91
CNEP1R1-202ENST00000427478 P3H3Q8IVL6 736 aa33.22■■■□□ 2.91
CNEP1R1-202ENST00000427478 KANK4Q5T7N3 995 aaPredicted RBP33.22■■■□□ 2.91
CNEP1R1-202ENST00000427478 FHAD1B1AJZ9 1412 aa33.21■■■□□ 2.91
CNEP1R1-202ENST00000427478 FHOD3Q2V2M9 1422 aa33.2■■■□□ 2.91
CNEP1R1-202ENST00000427478 EIF4G3O43432 1585 aaKnown RBP33.17■■■□□ 2.9
CNEP1R1-202ENST00000427478 PCF11O94913 1555 aaKnown RBP33.17■■■□□ 2.9
CNEP1R1-202ENST00000427478 TIAM1Q13009 1591 aa33.15■■■□□ 2.9
CNEP1R1-202ENST00000427478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.14■■■□□ 2.9
CNEP1R1-202ENST00000427478 SAMD9Q5K651 1589 aa33.13■■■□□ 2.89
CNEP1R1-202ENST00000427478 MAP3K1Q13233 1512 aa33.1■■■□□ 2.89
CNEP1R1-202ENST00000427478 CFAP43Q8NDM7 1665 aa33.07■■■□□ 2.88
CNEP1R1-202ENST00000427478 SNAPC4Q5SXM2 1469 aa33.04■■■□□ 2.88
CNEP1R1-202ENST00000427478 CCER1Q8TC90 406 aaPredicted RBP33.04■■■□□ 2.88
CNEP1R1-202ENST00000427478 FYCO1Q9BQS8 1478 aa33.03■■■□□ 2.88
CNEP1R1-202ENST00000427478 HNRNPUL2Q1KMD3 747 aaKnown RBP33.02■■■□□ 2.88
CNEP1R1-202ENST00000427478 IQGAP2Q13576 1575 aa33■■■□□ 2.87
CNEP1R1-202ENST00000427478 FMN1Q68DA7 1419 aa32.98■■■□□ 2.87
CNEP1R1-202ENST00000427478 CASKIN1Q8WXD9 1431 aa32.98■■■□□ 2.87
CNEP1R1-202ENST00000427478 LRRC9Q6ZRR7 1453 aa32.96■■■□□ 2.87
CNEP1R1-202ENST00000427478 ATP1B4Q9UN42 357 aaPredicted RBP32.95■■■□□ 2.87
CNEP1R1-202ENST00000427478 RRBP1Q9P2E9 1410 aaKnown RBP32.92■■■□□ 2.86
CNEP1R1-202ENST00000427478 MAGI1Q96QZ7 1491 aaPredicted RBP32.88■■■□□ 2.85
CNEP1R1-202ENST00000427478 GRIN2AQ12879 1464 aa32.88■■■□□ 2.85
CNEP1R1-202ENST00000427478 LRRIQ1Q96JM4 1722 aa32.84■■■□□ 2.85
CNEP1R1-202ENST00000427478 CCNB3Q8WWL7 1395 aa32.8■■■□□ 2.84
CNEP1R1-202ENST00000427478 UGGT2Q9NYU1 1516 aa32.79■■■□□ 2.84
CNEP1R1-202ENST00000427478 SYNJ2O15056 1496 aa32.78■■■□□ 2.84
CNEP1R1-202ENST00000427478 KIAA0586Q9BVV6 1533 aa32.78■■■□□ 2.84
CNEP1R1-202ENST00000427478 PHLDB1Q86UU1 1377 aa32.72■■■□□ 2.83
CNEP1R1-202ENST00000427478 CHMP7Q8WUX9 453 aaPredicted RBP32.71■■■□□ 2.83
CNEP1R1-202ENST00000427478 CEP170Q5SW79 1584 aa32.7■■■□□ 2.83
CNEP1R1-202ENST00000427478 KIAA0556O60303 1618 aa32.67■■■□□ 2.82
CNEP1R1-202ENST00000427478 HECW1Q76N89 1606 aa32.65■■■□□ 2.82
CNEP1R1-202ENST00000427478 FBLN2P98095 1184 aa32.65■■■□□ 2.82
CNEP1R1-202ENST00000427478 DISP1Q96F81 1524 aa32.63■■■□□ 2.81
CNEP1R1-202ENST00000427478 MTUS2Q5JR59 1369 aa32.6■■■□□ 2.81
CNEP1R1-202ENST00000427478 CCDC18Q5T9S5 1454 aa32.58■■■□□ 2.81
CNEP1R1-202ENST00000427478 ITGAEP38570 1179 aa32.56■■■□□ 2.8
CNEP1R1-202ENST00000427478 NUP160Q12769 1436 aa32.56■■■□□ 2.8
CNEP1R1-202ENST00000427478 EHBP1L1Q8N3D4 1523 aa32.54■■■□□ 2.8
CNEP1R1-202ENST00000427478 SUPT6HQ7KZ85 1726 aaKnown RBP32.52■■■□□ 2.8
CNEP1R1-202ENST00000427478 EPRSP07814 1512 aaKnown RBP32.5■■■□□ 2.79
CNEP1R1-202ENST00000427478 MAGI3Q5TCQ9 1506 aa32.49■■■□□ 2.79
CNEP1R1-202ENST00000427478 FAM50AQ14320 339 aaKnown RBP32.48■■■□□ 2.79
CNEP1R1-202ENST00000427478 CDK13Q14004 1512 aaKnown RBP32.47■■■□□ 2.79
CNEP1R1-202ENST00000427478 NCOA2Q15596 1464 aa32.46■■■□□ 2.79
CNEP1R1-202ENST00000427478 RAPGEF6Q8TEU7 1601 aa32.43■■■□□ 2.78
CNEP1R1-202ENST00000427478 FGD6Q6ZV73 1430 aa32.42■■■□□ 2.78
CNEP1R1-202ENST00000427478 CHD1O14646 1710 aa32.4■■■□□ 2.78
CNEP1R1-202ENST00000427478 DHX57Q6P158 1386 aaKnown RBP32.37■■■□□ 2.77
CNEP1R1-202ENST00000427478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.37■■■□□ 2.77
CNEP1R1-202ENST00000427478 ARID3CA6NKF2 412 aa32.36■■■□□ 2.77
CNEP1R1-202ENST00000427478 JPH4Q96JJ6 628 aa32.36■■■□□ 2.77
CNEP1R1-202ENST00000427478 ARHGEF11O15085 1522 aa32.36■■■□□ 2.77
CNEP1R1-202ENST00000427478 CARMIL2Q6F5E8 1435 aa32.35■■■□□ 2.77
CNEP1R1-202ENST00000427478 MYOM3Q5VTT5 1437 aa32.34■■■□□ 2.77
CNEP1R1-202ENST00000427478 NUP153P49790 1475 aaKnown RBP32.34■■■□□ 2.77
CNEP1R1-202ENST00000427478 RAB3GAP2Q9H2M9 1393 aa32.3■■■□□ 2.76
CNEP1R1-202ENST00000427478 SETD5Q9C0A6 1442 aa32.26■■■□□ 2.76
CNEP1R1-202ENST00000427478 PLB1Q6P1J6 1458 aa32.25■■■□□ 2.75
CNEP1R1-202ENST00000427478 PTPN23Q9H3S7 1636 aa32.25■■■□□ 2.75
CNEP1R1-202ENST00000427478 CLSPNQ9HAW4 1339 aa32.22■■■□□ 2.75
CNEP1R1-202ENST00000427478 PRG4Q92954 1404 aaPredicted RBP32.14■■■□□ 2.74
CNEP1R1-202ENST00000427478 ABCA8O94911 1581 aa32.13■■■□□ 2.73
CNEP1R1-202ENST00000427478 TCOF1Q13428 1488 aaKnown RBP32.12■■■□□ 2.73
CNEP1R1-202ENST00000427478 PTPRKQ15262 1439 aa32.11■■■□□ 2.73
CNEP1R1-202ENST00000427478 CDK11AQ9UQ88 783 aaPredicted RBP32.09■■■□□ 2.73
CNEP1R1-202ENST00000427478 SHROOM2Q13796 1616 aa32.08■■■□□ 2.73
CNEP1R1-202ENST00000427478 MIA2Q96PC5 1412 aa32.07■■■□□ 2.72
CNEP1R1-202ENST00000427478 TROQ12816 1431 aaPredicted RBP32.04■■■□□ 2.72
CNEP1R1-202ENST00000427478 MAPKBP1O60336 1514 aa32.03■■■□□ 2.72
CNEP1R1-202ENST00000427478 ADCY10Q96PN6 1610 aa32■■■□□ 2.71
CNEP1R1-202ENST00000427478 HFM1A2PYH4 1435 aa32■■■□□ 2.71
CNEP1R1-202ENST00000427478 PTPRGP23470 1445 aa31.98■■■□□ 2.71
CNEP1R1-202ENST00000427478 KIF14Q15058 1648 aa31.98■■■□□ 2.71
CNEP1R1-202ENST00000427478 ITSN2Q9NZM3 1697 aa31.93■■■□□ 2.7
CNEP1R1-202ENST00000427478 ATP10BO94823 1461 aa31.93■■■□□ 2.7
CNEP1R1-202ENST00000427478 NAIPQ13075 1403 aa31.93■■■□□ 2.7
CNEP1R1-202ENST00000427478 ERCC6L2Q5T890 1561 aa31.92■■■□□ 2.7
CNEP1R1-202ENST00000427478 CLASP1Q7Z460 1538 aa31.9■■■□□ 2.7
CNEP1R1-202ENST00000427478 GCC2Q8IWJ2 1684 aa31.9■■■□□ 2.7
CNEP1R1-202ENST00000427478 ZNF316A6NFI3 1004 aaPredicted RBP31.87■■■□□ 2.69
CNEP1R1-202ENST00000427478 CHIC2Q9UKJ5 165 aa31.85■■■□□ 2.69
CNEP1R1-202ENST00000427478 DNMT1P26358 1616 aaKnown RBP31.85■■■□□ 2.69
CNEP1R1-202ENST00000427478 PLEKHD1A6NEE1 506 aa31.82■■■□□ 2.69
CNEP1R1-202ENST00000427478 GPATCH8Q9UKJ3 1502 aaKnown RBP31.82■■■□□ 2.69
CNEP1R1-202ENST00000427478 DAPK1P53355 1430 aa31.81■■■□□ 2.68
CNEP1R1-202ENST00000427478 AKNAQ7Z591 1439 aa31.81■■■□□ 2.68
CNEP1R1-202ENST00000427478 UACAQ9BZF9 1416 aa31.81■■■□□ 2.68
CNEP1R1-202ENST00000427478 ZNF644Q9H582 1327 aaPredicted RBP31.81■■■□□ 2.68
CNEP1R1-202ENST00000427478 RRP7BPQ9NSQ0 103 aa31.81■■■□□ 2.68
CNEP1R1-202ENST00000427478 CDC42BPAQ5VT25 1732 aa31.79■■■□□ 2.68
CNEP1R1-202ENST00000427478 CAMSAP2Q08AD1 1489 aa31.78■■■□□ 2.68
CNEP1R1-202ENST00000427478 CFDP1Q9UEE9 299 aaPredicted RBP31.76■■■□□ 2.67
CNEP1R1-202ENST00000427478 ABCC5O15440 1437 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms