RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
VNN3-208ENST00000427187 FAM69CQ0P6D2 419 aa15.57■□□□□ 0.08
VNN3-208ENST00000427187 ABCC10Q5T3U5 1492 aa15.54■□□□□ 0.08
VNN3-208ENST00000427187 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
VNN3-208ENST00000427187 DIP2BQ9P265 1576 aa15.52■□□□□ 0.07
VNN3-208ENST00000427187 MAPKBP1O60336 1514 aa15.5■□□□□ 0.07
VNN3-208ENST00000427187 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
VNN3-208ENST00000427187 TSPOAP1O95153 1857 aa15.49■□□□□ 0.07
VNN3-208ENST00000427187 KDM6BO15054 1643 aa15.46■□□□□ 0.06
VNN3-208ENST00000427187 TTBK1Q5TCY1 1321 aaPredicted RBP15.45■□□□□ 0.06
VNN3-208ENST00000427187 KIAA0586Q9BVV6 1533 aa15.43■□□□□ 0.06
VNN3-208ENST00000427187 KDM4FA0A1W2PPD8 638 aa15.42■□□□□ 0.06
VNN3-208ENST00000427187 IGF1RP08069 1367 aa15.41■□□□□ 0.06
VNN3-208ENST00000427187 CUL7Q14999 1698 aa15.39■□□□□ 0.05
VNN3-208ENST00000427187 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
VNN3-208ENST00000427187 PTPRGP23470 1445 aa15.35■□□□□ 0.05
VNN3-208ENST00000427187 PPRC1Q5VV67 1664 aaKnown RBP15.32■□□□□ 0.04
VNN3-208ENST00000427187 ABCC2Q92887 1545 aa15.31■□□□□ 0.04
VNN3-208ENST00000427187 CARMIL1Q5VZK9 1371 aa15.3■□□□□ 0.04
VNN3-208ENST00000427187 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
VNN3-208ENST00000427187 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
VNN3-208ENST00000427187 CARMIL2Q6F5E8 1435 aa15.28■□□□□ 0.04
VNN3-208ENST00000427187 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
VNN3-208ENST00000427187 GLI2P10070 1586 aa15.25■□□□□ 0.03
VNN3-208ENST00000427187 PLB1Q6P1J6 1458 aa15.25■□□□□ 0.03
VNN3-208ENST00000427187 ADGRL1O94910 1474 aa15.24■□□□□ 0.03
VNN3-208ENST00000427187 DISP1Q96F81 1524 aa15.23■□□□□ 0.03
VNN3-208ENST00000427187 COL17A1Q9UMD9 1497 aaPredicted RBP15.23■□□□□ 0.03
VNN3-208ENST00000427187 ILDR1Q86SU0 546 aaPredicted RBP15.23■□□□□ 0.03
VNN3-208ENST00000427187 UACAQ9BZF9 1416 aa15.23■□□□□ 0.03
VNN3-208ENST00000427187 UHRF1BP1LA0JNW5 1464 aa15.21■□□□□ 0.03
VNN3-208ENST00000427187 EPRSP07814 1512 aaKnown RBP15.2■□□□□ 0.02
VNN3-208ENST00000427187 ZCCHC11Q5TAX3 1644 aaKnown RBP15.2■□□□□ 0.02
VNN3-208ENST00000427187 MAP3K4Q9Y6R4 1608 aa15.2■□□□□ 0.02
VNN3-208ENST00000427187 KDM5BQ9UGL1 1544 aa15.17■□□□□ 0.02
VNN3-208ENST00000427187 KIAA0556O60303 1618 aa15.16■□□□□ 0.02
VNN3-208ENST00000427187 UGGT2Q9NYU1 1516 aa15.14■□□□□ 0.01
VNN3-208ENST00000427187 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
VNN3-208ENST00000427187 TEX14Q8IWB6 1497 aa15.13■□□□□ 0.01
VNN3-208ENST00000427187 HECW2Q9P2P5 1572 aa15.12■□□□□ 0.01
VNN3-208ENST00000427187 WDR7Q9Y4E6 1490 aa15.1■□□□□ 0.01
VNN3-208ENST00000427187 CTTNBP2Q8WZ74 1663 aa15.06■□□□□ 0
VNN3-208ENST00000427187 KCNH8Q96L42 1107 aa15.06■□□□□ 0
VNN3-208ENST00000427187 CD109Q6YHK3 1445 aa15.03■□□□□ -0
VNN3-208ENST00000427187 CFAP43Q8NDM7 1665 aa15.03■□□□□ -0
VNN3-208ENST00000427187 ABCA8O94911 1581 aa15.02■□□□□ -0
VNN3-208ENST00000427187 ARID3CA6NKF2 412 aa15.01□□□□□ -0.01
VNN3-208ENST00000427187 KIF21BO75037 1637 aa15.01□□□□□ -0.01
VNN3-208ENST00000427187 MAGI3Q5TCQ9 1506 aa15.01□□□□□ -0.01
VNN3-208ENST00000427187 GOLGA3Q08378 1498 aa14.98□□□□□ -0.01
VNN3-208ENST00000427187 P3H3Q8IVL6 736 aa14.94□□□□□ -0.02
VNN3-208ENST00000427187 PRXQ9BXM0 1461 aa14.91□□□□□ -0.02
VNN3-208ENST00000427187 ATP10BO94823 1461 aa14.89□□□□□ -0.03
VNN3-208ENST00000427187 ARAP3Q8WWN8 1544 aa14.89□□□□□ -0.03
VNN3-208ENST00000427187 RAPGEF3O95398 923 aa14.87□□□□□ -0.03
VNN3-208ENST00000427187 ABCA9Q8IUA7 1624 aa14.87□□□□□ -0.03
VNN3-208ENST00000427187 ADAMTSL3P82987 1691 aa14.85□□□□□ -0.03
VNN3-208ENST00000427187 PTPRMP28827 1452 aa14.85□□□□□ -0.03
VNN3-208ENST00000427187 FRMPD1Q5SYB0 1578 aa14.83□□□□□ -0.04
VNN3-208ENST00000427187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
VNN3-208ENST00000427187 HNRNPUL2Q1KMD3 747 aaKnown RBP14.83□□□□□ -0.04
VNN3-208ENST00000427187 RAPGEF6Q8TEU7 1601 aa14.82□□□□□ -0.04
VNN3-208ENST00000427187 SAMD9Q5K651 1589 aa14.81□□□□□ -0.04
VNN3-208ENST00000427187 MADDQ8WXG6 1647 aa14.81□□□□□ -0.04
VNN3-208ENST00000427187 RANGAP1P46060 587 aaPredicted RBP14.81□□□□□ -0.04
VNN3-208ENST00000427187 FBXO41Q8TF61 875 aa14.81□□□□□ -0.04
VNN3-208ENST00000427187 ARID4BQ4LE39 1312 aaPredicted RBP14.81□□□□□ -0.04
VNN3-208ENST00000427187 BCORL1Q5H9F3 1711 aa14.8□□□□□ -0.04
VNN3-208ENST00000427187 FAM9AQ8IZU1 332 aaPredicted RBP14.8□□□□□ -0.04
VNN3-208ENST00000427187 NEO1Q92859 1461 aa14.78□□□□□ -0.04
VNN3-208ENST00000427187 PHLDB1Q86UU1 1377 aa14.77□□□□□ -0.04
VNN3-208ENST00000427187 NUP153P49790 1475 aaKnown RBP14.76□□□□□ -0.05
VNN3-208ENST00000427187 PLPPR3Q6T4P5 718 aa14.76□□□□□ -0.05
VNN3-208ENST00000427187 RIMS1Q86UR5 1692 aaKnown RBP14.76□□□□□ -0.05
VNN3-208ENST00000427187 PCF11O94913 1555 aaKnown RBP14.76□□□□□ -0.05
VNN3-208ENST00000427187 LMTK3Q96Q04 1460 aa14.75□□□□□ -0.05
VNN3-208ENST00000427187 FHOD3Q2V2M9 1422 aa14.75□□□□□ -0.05
VNN3-208ENST00000427187 ARHGEF40Q8TER5 1519 aa14.73□□□□□ -0.05
VNN3-208ENST00000427187 RICTORQ6R327 1708 aa14.73□□□□□ -0.05
VNN3-208ENST00000427187 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
VNN3-208ENST00000427187 SIGLEC1Q9BZZ2 1709 aa14.72□□□□□ -0.05
VNN3-208ENST00000427187 HSPA2P54652 639 aa14.71□□□□□ -0.05
VNN3-208ENST00000427187 DENND4BO75064 1496 aaPredicted RBP14.7□□□□□ -0.06
VNN3-208ENST00000427187 TTC37Q6PGP7 1564 aa14.69□□□□□ -0.06
VNN3-208ENST00000427187 AKNAQ7Z591 1439 aa14.69□□□□□ -0.06
VNN3-208ENST00000427187 FANCAO15360 1455 aa14.69□□□□□ -0.06
VNN3-208ENST00000427187 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.68□□□□□ -0.06
VNN3-208ENST00000427187 YEATS2Q9ULM3 1422 aa14.67□□□□□ -0.06
VNN3-208ENST00000427187 PLEKHD1A6NEE1 506 aa14.67□□□□□ -0.06
VNN3-208ENST00000427187 MLECQ14165 292 aa14.66□□□□□ -0.06
VNN3-208ENST00000427187 CFAP74Q9C0B2 1584 aa14.65□□□□□ -0.06
VNN3-208ENST00000427187 ZFYVE16Q7Z3T8 1539 aa14.65□□□□□ -0.06
VNN3-208ENST00000427187 CDK13Q14004 1512 aaKnown RBP14.64□□□□□ -0.07
VNN3-208ENST00000427187 ZMYM4Q5VZL5 1548 aa14.63□□□□□ -0.07
VNN3-208ENST00000427187 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
VNN3-208ENST00000427187 FER1L4A9Z1Z3 1794 aa14.62□□□□□ -0.07
VNN3-208ENST00000427187 EFCAB5A4FU69 1503 aa14.61□□□□□ -0.07
VNN3-208ENST00000427187 POGZQ7Z3K3 1410 aa14.61□□□□□ -0.07
VNN3-208ENST00000427187 EHMT2Q96KQ7 1210 aa14.6□□□□□ -0.07
VNN3-208ENST00000427187 SCAPERQ9BY12 1400 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms