RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 FBXO3Q9UK99 471 aa4.94□□□□□ -1.62
LINC00407-201ENST00000426509 NPM1P06748 294 aaKnown RBP eCLIP4.93□□□□□ -1.62
LINC00407-201ENST00000426509 PLCD3Q8N3E9 789 aa4.93□□□□□ -1.62
LINC00407-201ENST00000426509 ZRANB1Q9UGI0 708 aa4.93□□□□□ -1.62
LINC00407-201ENST00000426509 VASPP50552 380 aaPredicted RBP4.92□□□□□ -1.62
LINC00407-201ENST00000426509 NUBP1P53384 320 aa4.92□□□□□ -1.62
LINC00407-201ENST00000426509 RASEFQ8IZ41 740 aa4.92□□□□□ -1.62
LINC00407-201ENST00000426509 ZNF579Q8NAF0 562 aaKnown RBP4.92□□□□□ -1.62
LINC00407-201ENST00000426509 CLCN6P51797 869 aa4.91□□□□□ -1.62
LINC00407-201ENST00000426509 EIF4G1Q04637 1599 aaKnown RBP4.91□□□□□ -1.62
LINC00407-201ENST00000426509 PHF12Q96QT6 1004 aa4.9□□□□□ -1.63
LINC00407-201ENST00000426509 POTEIP0CG38 1075 aa4.89□□□□□ -1.63
LINC00407-201ENST00000426509 TSPYL2Q9H2G4 693 aaPredicted RBP4.89□□□□□ -1.63
LINC00407-201ENST00000426509 CCDC61Q9Y6R9 512 aa4.89□□□□□ -1.63
LINC00407-201ENST00000426509 SHROOM4Q9ULL8 1493 aa4.88□□□□□ -1.63
LINC00407-201ENST00000426509 PLEKHG5O94827 1062 aa4.88□□□□□ -1.63
LINC00407-201ENST00000426509 IFNLR1Q8IU57 520 aaPredicted RBP4.88□□□□□ -1.63
LINC00407-201ENST00000426509 CUX2O14529 1486 aa4.88□□□□□ -1.63
LINC00407-201ENST00000426509 GALR2O43603 387 aaPredicted RBP4.87□□□□□ -1.63
LINC00407-201ENST00000426509 PAK3O75914 559 aaPredicted RBP4.85□□□□□ -1.63
LINC00407-201ENST00000426509 KIF12Q96FN5 646 aa4.85□□□□□ -1.63
LINC00407-201ENST00000426509 ZBTB47Q9UFB7 747 aaPredicted RBP4.85□□□□□ -1.63
LINC00407-201ENST00000426509 DCAF1Q9Y4B6 1507 aa4.84□□□□□ -1.63
LINC00407-201ENST00000426509 KLHL34Q8N239 644 aa4.83□□□□□ -1.64
LINC00407-201ENST00000426509 MS4A3Q96HJ5 214 aa4.83□□□□□ -1.64
LINC00407-201ENST00000426509 PCDH10Q9P2E7 1040 aa4.83□□□□□ -1.64
LINC00407-201ENST00000426509 MAP3K13O43283 966 aa4.82□□□□□ -1.64
LINC00407-201ENST00000426509 DCAF8Q5TAQ9 597 aa4.81□□□□□ -1.64
LINC00407-201ENST00000426509 TRPC6Q9Y210 931 aa4.81□□□□□ -1.64
LINC00407-201ENST00000426509 PELP1Q8IZL8 1130 aaKnown RBP4.8□□□□□ -1.64
LINC00407-201ENST00000426509 DCBLD2Q96PD2 775 aa4.8□□□□□ -1.64
LINC00407-201ENST00000426509 SPOCK2Q92563 424 aa4.79□□□□□ -1.64
LINC00407-201ENST00000426509 FAM212AQ96EL1 285 aa4.79□□□□□ -1.64
LINC00407-201ENST00000426509 ERCC6Q03468 1493 aa4.79□□□□□ -1.64
LINC00407-201ENST00000426509 MYO15BQ96JP2 1530 aa4.78□□□□□ -1.64
LINC00407-201ENST00000426509 SCRIBQ14160 1630 aa4.77□□□□□ -1.65
LINC00407-201ENST00000426509 ATMINO43313 823 aaPredicted RBP4.77□□□□□ -1.65
LINC00407-201ENST00000426509 PYGBP11216 843 aa4.77□□□□□ -1.65
LINC00407-201ENST00000426509 ASTLQ6HA08 431 aaPredicted RBP4.77□□□□□ -1.65
LINC00407-201ENST00000426509 IFNL1Q8IU54 200 aa4.77□□□□□ -1.65
LINC00407-201ENST00000426509 SGIP1Q9BQI5 828 aa4.77□□□□□ -1.65
LINC00407-201ENST00000426509 POTEMA6NI47 508 aa4.76□□□□□ -1.65
LINC00407-201ENST00000426509 CHRM1P11229 460 aaPredicted RBP4.76□□□□□ -1.65
LINC00407-201ENST00000426509 GSE1Q14687 1217 aa4.76□□□□□ -1.65
LINC00407-201ENST00000426509 BMP2KQ9NSY1 1161 aaPredicted RBP4.76□□□□□ -1.65
LINC00407-201ENST00000426509 PCDHB13Q9Y5F0 798 aa4.76□□□□□ -1.65
LINC00407-201ENST00000426509 NESP48681 1621 aa4.75□□□□□ -1.65
LINC00407-201ENST00000426509 ATN1P54259 1190 aaPredicted RBP4.75□□□□□ -1.65
LINC00407-201ENST00000426509 RTN4Q9NQC3 1192 aaKnown RBP4.75□□□□□ -1.65
LINC00407-201ENST00000426509 POTEB2H3BUK9 544 aa4.74□□□□□ -1.65
LINC00407-201ENST00000426509 SUPT5HO00267 1087 aaKnown RBP4.74□□□□□ -1.65
LINC00407-201ENST00000426509 TIE1P35590 1138 aa4.74□□□□□ -1.65
LINC00407-201ENST00000426509 PCDHB8Q9UN66 801 aa4.74□□□□□ -1.65
LINC00407-201ENST00000426509 TTLL13PA6NNM8 815 aa4.73□□□□□ -1.65
LINC00407-201ENST00000426509 POTEGQ6S5H5 508 aa4.73□□□□□ -1.65
LINC00407-201ENST00000426509 CIZ1Q9ULV3 898 aaPredicted RBP4.73□□□□□ -1.65
LINC00407-201ENST00000426509 POTEFA5A3E0 1075 aa4.72□□□□□ -1.65
LINC00407-201ENST00000426509 POTEJP0CG39 1038 aa4.7□□□□□ -1.66
LINC00407-201ENST00000426509 C7P10643 843 aa4.69□□□□□ -1.66
LINC00407-201ENST00000426509 AMER1Q5JTC6 1135 aaPredicted RBP4.69□□□□□ -1.66
LINC00407-201ENST00000426509 SLC39A7Q92504 469 aa4.69□□□□□ -1.66
LINC00407-201ENST00000426509 TMEM106CQ9BVX2 250 aa4.69□□□□□ -1.66
LINC00407-201ENST00000426509 THOC2Q8NI27 1593 aaKnown RBP4.69□□□□□ -1.66
LINC00407-201ENST00000426509 RNF25Q96BH1 459 aaPredicted RBP4.68□□□□□ -1.66
LINC00407-201ENST00000426509 OTUD5Q96G74 571 aa4.68□□□□□ -1.66
LINC00407-201ENST00000426509 METRNQ9UJH8 293 aa4.68□□□□□ -1.66
LINC00407-201ENST00000426509 TRIM35Q9UPQ4 493 aa4.68□□□□□ -1.66
LINC00407-201ENST00000426509 COLQQ9Y215 455 aaPredicted RBP4.68□□□□□ -1.66
LINC00407-201ENST00000426509 PKD2Q13563 968 aa4.67□□□□□ -1.66
LINC00407-201ENST00000426509 ZNF467Q7Z7K2 595 aaPredicted RBP4.67□□□□□ -1.66
LINC00407-201ENST00000426509 PSEN1P49768 467 aa4.66□□□□□ -1.66
LINC00407-201ENST00000426509 MAMSTRQ6ZN01 415 aa4.66□□□□□ -1.66
LINC00407-201ENST00000426509 NCAPD3P42695 1498 aa4.65□□□□□ -1.66
LINC00407-201ENST00000426509 ILDR1Q86SU0 546 aaPredicted RBP4.65□□□□□ -1.67
LINC00407-201ENST00000426509 SMARCA2P51531 1590 aa4.65□□□□□ -1.67
LINC00407-201ENST00000426509 IRX5P78411 483 aaPredicted RBP4.64□□□□□ -1.67
LINC00407-201ENST00000426509 PDAP1Q13442 181 aaKnown RBP4.64□□□□□ -1.67
LINC00407-201ENST00000426509 IER5LQ5T953 404 aa4.64□□□□□ -1.67
LINC00407-201ENST00000426509 ATAD2BQ9ULI0 1458 aa4.62□□□□□ -1.67
LINC00407-201ENST00000426509 RIMBP3CA6NJZ7 1639 aa4.61□□□□□ -1.67
LINC00407-201ENST00000426509 RIMBP3BA6NNM3 1639 aa4.61□□□□□ -1.67
LINC00407-201ENST00000426509 RIMBP3Q9UFD9 1639 aa4.61□□□□□ -1.67
LINC00407-201ENST00000426509 RIOK3O14730 519 aaKnown RBP4.61□□□□□ -1.67
LINC00407-201ENST00000426509 RGL2O15211 777 aa4.61□□□□□ -1.67
LINC00407-201ENST00000426509 ECM2O94769 699 aaPredicted RBP4.61□□□□□ -1.67
LINC00407-201ENST00000426509 CYB5RLQ6IPT4 315 aa4.61□□□□□ -1.67
LINC00407-201ENST00000426509 RSF1Q96T23 1441 aaPredicted RBP4.61□□□□□ -1.67
LINC00407-201ENST00000426509 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.6□□□□□ -1.67
LINC00407-201ENST00000426509 SEC24BO95487 1268 aa4.6□□□□□ -1.67
LINC00407-201ENST00000426509 PDCD7Q8N8D1 485 aaKnown RBP4.6□□□□□ -1.67
LINC00407-201ENST00000426509 ZFP91Q96JP5 570 aaPredicted RBP4.6□□□□□ -1.67
LINC00407-201ENST00000426509 OCEL1Q9H607 264 aa4.6□□□□□ -1.67
LINC00407-201ENST00000426509 BAZ1AQ9NRL2 1556 aaPredicted RBP4.6□□□□□ -1.67
LINC00407-201ENST00000426509 VGFO15240 615 aaPredicted RBP4.59□□□□□ -1.67
LINC00407-201ENST00000426509 DPY19L2Q6NUT2 758 aa4.59□□□□□ -1.67
LINC00407-201ENST00000426509 CABP2Q9NPB3 220 aa4.59□□□□□ -1.67
LINC00407-201ENST00000426509 PLCG2P16885 1265 aa4.58□□□□□ -1.68
LINC00407-201ENST00000426509 EFCAB3Q8N7B9 438 aa4.58□□□□□ -1.68
LINC00407-201ENST00000426509 SCUBE2Q9NQ36 999 aa4.58□□□□□ -1.68
LINC00407-201ENST00000426509 ARHGEF11O15085 1522 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms