RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 EIF4G2P78344 907 aaKnown RBP eCLIP13.68□□□□□ -0.221e-14■■□□□ 11.4
SP1-202ENST00000426431 WDR43Q15061 677 aaKnown RBP eCLIP13.67□□□□□ -0.22
SP1-202ENST00000426431 TOP2AP11388 1531 aaKnown RBP13.67□□□□□ -0.22
SP1-202ENST00000426431 TMC1Q8TDI8 760 aa13.66□□□□□ -0.22
SP1-202ENST00000426431 CCNB3Q8WWL7 1395 aa13.66□□□□□ -0.22
SP1-202ENST00000426431 KANK1Q14678 1352 aa13.65□□□□□ -0.22
SP1-202ENST00000426431 ABCC8Q09428 1581 aa13.65□□□□□ -0.22
SP1-202ENST00000426431 HDGFP51858 240 aaKnown RBP13.65□□□□□ -0.22
SP1-202ENST00000426431 CCDC88BA6NC98 1476 aa13.62□□□□□ -0.23
SP1-202ENST00000426431 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
SP1-202ENST00000426431 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
SP1-202ENST00000426431 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
SP1-202ENST00000426431 ARID4BQ4LE39 1312 aaPredicted RBP13.6□□□□□ -0.23
SP1-202ENST00000426431 CADPSQ9ULU8 1353 aa13.6□□□□□ -0.23
SP1-202ENST00000426431 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
SP1-202ENST00000426431 SOGA1O94964 1423 aa13.6□□□□□ -0.23
SP1-202ENST00000426431 ANP32AP39687 249 aaKnown RBP13.6□□□□□ -0.23
SP1-202ENST00000426431 KDM2AQ9Y2K7 1162 aa13.59□□□□□ -0.23
SP1-202ENST00000426431 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
SP1-202ENST00000426431 EIF4G1Q04637 1599 aaKnown RBP13.59□□□□□ -0.23
SP1-202ENST00000426431 CFAP53Q96M91 514 aa13.58□□□□□ -0.23
SP1-202ENST00000426431 PLPPR3Q6T4P5 718 aa13.58□□□□□ -0.24
SP1-202ENST00000426431 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
SP1-202ENST00000426431 HNRNPUQ00839 825 aaKnown RBP eCLIP13.55□□□□□ -0.24
SP1-202ENST00000426431 DDX10Q13206 875 aaKnown RBP13.55□□□□□ -0.24
SP1-202ENST00000426431 EIF5BO60841 1220 aaKnown RBP13.54□□□□□ -0.24
SP1-202ENST00000426431 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
SP1-202ENST00000426431 GTF3C3Q9Y5Q9 886 aa13.53□□□□□ -0.24
SP1-202ENST00000426431 MRS2Q9HD23 443 aa13.52□□□□□ -0.25
SP1-202ENST00000426431 MYH16Q9H6N6 1097 aa13.52□□□□□ -0.25
SP1-202ENST00000426431 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
SP1-202ENST00000426431 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
SP1-202ENST00000426431 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
SP1-202ENST00000426431 RSPH4AQ5TD94 716 aa13.51□□□□□ -0.25
SP1-202ENST00000426431 VPS8Q8N3P4 1428 aa13.5□□□□□ -0.25
SP1-202ENST00000426431 FAM9BQ8IZU0 186 aa13.5□□□□□ -0.25
SP1-202ENST00000426431 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
SP1-202ENST00000426431 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
SP1-202ENST00000426431 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
SP1-202ENST00000426431 CARD11Q9BXL7 1154 aa13.46□□□□□ -0.26
SP1-202ENST00000426431 NUDCQ9Y266 331 aa13.46□□□□□ -0.26
SP1-202ENST00000426431 RAPGEF2Q9Y4G8 1499 aa13.46□□□□□ -0.26
SP1-202ENST00000426431 HSP90AA1P07900 732 aaKnown RBP13.45□□□□□ -0.26
SP1-202ENST00000426431 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
SP1-202ENST00000426431 POGKQ9P215 609 aa13.44□□□□□ -0.26
SP1-202ENST00000426431 CHMP4BQ9H444 224 aaKnown RBP13.44□□□□□ -0.26
SP1-202ENST00000426431 HAP1P54257 671 aaPredicted RBP13.43□□□□□ -0.26
SP1-202ENST00000426431 ANP32BQ92688 251 aaKnown RBP13.43□□□□□ -0.26
SP1-202ENST00000426431 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
SP1-202ENST00000426431 WIZO95785 1651 aa13.41□□□□□ -0.26
SP1-202ENST00000426431 CCDC18Q5T9S5 1454 aa13.41□□□□□ -0.26
SP1-202ENST00000426431 ANKRD30AQ9BXX3 1397 aa13.4□□□□□ -0.26
SP1-202ENST00000426431 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
SP1-202ENST00000426431 TDRD9Q8NDG6 1382 aaKnown RBP13.39□□□□□ -0.27
SP1-202ENST00000426431 BCL11AQ9H165 835 aa13.38□□□□□ -0.27
SP1-202ENST00000426431 TMF1P82094 1093 aa13.38□□□□□ -0.27
SP1-202ENST00000426431 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
SP1-202ENST00000426431 SETD5Q9C0A6 1442 aa13.38□□□□□ -0.27
SP1-202ENST00000426431 MS4A1P11836 297 aa13.38□□□□□ -0.27
SP1-202ENST00000426431 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
SP1-202ENST00000426431 MAPK8IP3Q9UPT6 1336 aa13.36□□□□□ -0.27
SP1-202ENST00000426431 FKBP8Q14318 412 aa13.36□□□□□ -0.27
SP1-202ENST00000426431 NCAPD3P42695 1498 aa13.32□□□□□ -0.28
SP1-202ENST00000426431 CHMP4AQ9BY43 222 aa13.31□□□□□ -0.28
SP1-202ENST00000426431 EIF3AQ14152 1382 aaKnown RBP13.31□□□□□ -0.28
SP1-202ENST00000426431 SALL2Q9Y467 1007 aaPredicted RBP13.29□□□□□ -0.28
SP1-202ENST00000426431 JPH4Q96JJ6 628 aa13.29□□□□□ -0.28
SP1-202ENST00000426431 ZBTB7CA1YPR0 619 aa13.29□□□□□ -0.28
SP1-202ENST00000426431 CASC1Q6TDU7 716 aa13.27□□□□□ -0.29
SP1-202ENST00000426431 DCAF11Q8TEB1 546 aa13.27□□□□□ -0.29
SP1-202ENST00000426431 A0A0G2JS52 829 aa13.26□□□□□ -0.29
SP1-202ENST00000426431 SPAG9O60271 1321 aaKnown RBP13.25□□□□□ -0.29
SP1-202ENST00000426431 HDGFL2Q7Z4V5 671 aaPredicted RBP13.25□□□□□ -0.29
SP1-202ENST00000426431 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
SP1-202ENST00000426431 BECN1Q14457 450 aa13.25□□□□□ -0.29
SP1-202ENST00000426431 DDRGK1Q96HY6 314 aa13.24□□□□□ -0.29
SP1-202ENST00000426431 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
SP1-202ENST00000426431 GGT6Q6P531 493 aa13.23□□□□□ -0.29
SP1-202ENST00000426431 NUP155O75694 1391 aa13.23□□□□□ -0.29
SP1-202ENST00000426431 PTPRGP23470 1445 aa13.23□□□□□ -0.29
SP1-202ENST00000426431 FTSJ3Q8IY81 847 aaKnown RBP13.23□□□□□ -0.29
SP1-202ENST00000426431 PKD2Q13563 968 aa13.23□□□□□ -0.29
SP1-202ENST00000426431 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
SP1-202ENST00000426431 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
SP1-202ENST00000426431 EID1Q9Y6B2 187 aa13.22□□□□□ -0.29
SP1-202ENST00000426431 CFAP44Q96MT7 982 aa13.22□□□□□ -0.29
SP1-202ENST00000426431 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
SP1-202ENST00000426431 PPM1GO15355 546 aaPredicted RBP13.21□□□□□ -0.29
SP1-202ENST00000426431 SRPK2P78362 688 aaKnown RBP13.21□□□□□ -0.3
SP1-202ENST00000426431 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
SP1-202ENST00000426431 MLECQ14165 292 aa13.19□□□□□ -0.3
SP1-202ENST00000426431 MIER1Q8N108 512 aa13.18□□□□□ -0.3
SP1-202ENST00000426431 CCER2I3L3R5 266 aa13.18□□□□□ -0.3
SP1-202ENST00000426431 FHOD3Q2V2M9 1422 aa13.18□□□□□ -0.3
SP1-202ENST00000426431 MPHOSPH9Q99550 1183 aa13.17□□□□□ -0.3
SP1-202ENST00000426431 ROCK2O75116 1388 aaKnown RBP13.17□□□□□ -0.3
SP1-202ENST00000426431 MORC1Q86VD1 984 aa13.17□□□□□ -0.3
SP1-202ENST00000426431 KTN1Q86UP2 1357 aaKnown RBP13.17□□□□□ -0.3
SP1-202ENST00000426431 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
SP1-202ENST00000426431 KIF3BO15066 747 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms