RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 ADAMTS12P58397 1594 aa27.16■■□□□ 1.94
FN1-208ENST00000426059 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
FN1-208ENST00000426059 CTTNBP2Q8WZ74 1663 aa27.14■■□□□ 1.94
FN1-208ENST00000426059 SNAPC4Q5SXM2 1469 aa27.13■■□□□ 1.93
FN1-208ENST00000426059 P3H3Q8IVL6 736 aa27.11■■□□□ 1.93
FN1-208ENST00000426059 FBLN2P98095 1184 aa27■■□□□ 1.91
FN1-208ENST00000426059 APLP2Q06481 763 aa26.97■■□□□ 1.91
FN1-208ENST00000426059 MAGI1Q96QZ7 1491 aaPredicted RBP26.97■■□□□ 1.91
FN1-208ENST00000426059 FHOD3Q2V2M9 1422 aa26.96■■□□□ 1.91
FN1-208ENST00000426059 CHMP7Q8WUX9 453 aaPredicted RBP26.95■■□□□ 1.91
FN1-208ENST00000426059 GRIN2AQ12879 1464 aa26.94■■□□□ 1.9
FN1-208ENST00000426059 SYNJ2O15056 1496 aa26.91■■□□□ 1.9
FN1-208ENST00000426059 EFCAB5A4FU69 1503 aa26.89■■□□□ 1.9
FN1-208ENST00000426059 IQGAP2Q13576 1575 aa26.88■■□□□ 1.89
FN1-208ENST00000426059 SAMD9Q5K651 1589 aa26.84■■□□□ 1.89
FN1-208ENST00000426059 KANK4Q5T7N3 995 aaPredicted RBP26.83■■□□□ 1.88
FN1-208ENST00000426059 ATP1B4Q9UN42 357 aaPredicted RBP26.83■■□□□ 1.88
FN1-208ENST00000426059 CEP170Q5SW79 1584 aa26.81■■□□□ 1.88
FN1-208ENST00000426059 KIAA0586Q9BVV6 1533 aa26.79■■□□□ 1.88
FN1-208ENST00000426059 PCF11O94913 1555 aaKnown RBP26.78■■□□□ 1.88
FN1-208ENST00000426059 FMN1Q68DA7 1419 aa26.71■■□□□ 1.87
FN1-208ENST00000426059 UGGT2Q9NYU1 1516 aa26.7■■□□□ 1.86
FN1-208ENST00000426059 NUP160Q12769 1436 aa26.7■■□□□ 1.86
FN1-208ENST00000426059 CHD1O14646 1710 aa26.68■■□□□ 1.86
FN1-208ENST00000426059 CASKIN1Q8WXD9 1431 aa26.67■■□□□ 1.86
FN1-208ENST00000426059 TIAM1Q13009 1591 aa26.67■■□□□ 1.86
FN1-208ENST00000426059 FYCO1Q9BQS8 1478 aa26.65■■□□□ 1.86
FN1-208ENST00000426059 DISP1Q96F81 1524 aa26.65■■□□□ 1.86
FN1-208ENST00000426059 JPH4Q96JJ6 628 aa26.61■■□□□ 1.85
FN1-208ENST00000426059 KIAA0556O60303 1618 aa26.61■■□□□ 1.85
FN1-208ENST00000426059 MAP3K1Q13233 1512 aa26.57■■□□□ 1.84
FN1-208ENST00000426059 LRRIQ1Q96JM4 1722 aa26.57■■□□□ 1.84
FN1-208ENST00000426059 CFAP43Q8NDM7 1665 aa26.57■■□□□ 1.84
FN1-208ENST00000426059 LRRC9Q6ZRR7 1453 aa26.55■■□□□ 1.84
FN1-208ENST00000426059 ARID3CA6NKF2 412 aa26.53■■□□□ 1.84
FN1-208ENST00000426059 HNRNPUL2Q1KMD3 747 aaKnown RBP26.47■■□□□ 1.83
FN1-208ENST00000426059 CARMIL2Q6F5E8 1435 aa26.45■■□□□ 1.83
FN1-208ENST00000426059 HRCP23327 699 aa26.44■■□□□ 1.82
FN1-208ENST00000426059 HECW1Q76N89 1606 aa26.42■■□□□ 1.82
FN1-208ENST00000426059 PRG4Q92954 1404 aaPredicted RBP26.42■■□□□ 1.82
FN1-208ENST00000426059 CDK13Q14004 1512 aaKnown RBP26.4■■□□□ 1.82
FN1-208ENST00000426059 MTUS2Q5JR59 1369 aa26.39■■□□□ 1.82
FN1-208ENST00000426059 PHLDB1Q86UU1 1377 aa26.39■■□□□ 1.81
FN1-208ENST00000426059 EPRSP07814 1512 aaKnown RBP26.38■■□□□ 1.81
FN1-208ENST00000426059 PLB1Q6P1J6 1458 aa26.38■■□□□ 1.81
FN1-208ENST00000426059 RAPGEF6Q8TEU7 1601 aa26.36■■□□□ 1.81
FN1-208ENST00000426059 MAGI3Q5TCQ9 1506 aa26.35■■□□□ 1.81
FN1-208ENST00000426059 RRBP1Q9P2E9 1410 aaKnown RBP26.35■■□□□ 1.81
FN1-208ENST00000426059 CCDC18Q5T9S5 1454 aa26.34■■□□□ 1.81
FN1-208ENST00000426059 NUP153P49790 1475 aaKnown RBP26.33■■□□□ 1.81
FN1-208ENST00000426059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.33■■□□□ 1.81
FN1-208ENST00000426059 CCNB3Q8WWL7 1395 aa26.31■■□□□ 1.8
FN1-208ENST00000426059 SHROOM2Q13796 1616 aa26.31■■□□□ 1.8
FN1-208ENST00000426059 ERCC6L2Q5T890 1561 aa26.31■■□□□ 1.8
FN1-208ENST00000426059 CLASP1Q7Z460 1538 aa26.28■■□□□ 1.8
FN1-208ENST00000426059 ITGAEP38570 1179 aa26.28■■□□□ 1.8
FN1-208ENST00000426059 EHBP1L1Q8N3D4 1523 aa26.25■■□□□ 1.79
FN1-208ENST00000426059 PTPRGP23470 1445 aa26.25■■□□□ 1.79
FN1-208ENST00000426059 NCOA2Q15596 1464 aa26.23■■□□□ 1.79
FN1-208ENST00000426059 FAM50AQ14320 339 aaKnown RBP26.22■■□□□ 1.79
FN1-208ENST00000426059 SUPT6HQ7KZ85 1726 aaKnown RBP26.22■■□□□ 1.79
FN1-208ENST00000426059 ABCA8O94911 1581 aa26.2■■□□□ 1.78
FN1-208ENST00000426059 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
FN1-208ENST00000426059 FGD6Q6ZV73 1430 aa26.13■■□□□ 1.77
FN1-208ENST00000426059 ARHGEF11O15085 1522 aa26.11■■□□□ 1.77
FN1-208ENST00000426059 CDK11AQ9UQ88 783 aaPredicted RBP26.11■■□□□ 1.77
FN1-208ENST00000426059 MYOM3Q5VTT5 1437 aa26.11■■□□□ 1.77
FN1-208ENST00000426059 ATP10BO94823 1461 aa26.1■■□□□ 1.77
FN1-208ENST00000426059 OSCARQ8IYS5 282 aa26.09■■□□□ 1.77
FN1-208ENST00000426059 UACAQ9BZF9 1416 aa26.07■■□□□ 1.76
FN1-208ENST00000426059 TROQ12816 1431 aaPredicted RBP26.03■■□□□ 1.76
FN1-208ENST00000426059 PLEKHD1A6NEE1 506 aa26■■□□□ 1.75
FN1-208ENST00000426059 KIF14Q15058 1648 aa26■■□□□ 1.75
FN1-208ENST00000426059 PTPN23Q9H3S7 1636 aa25.99■■□□□ 1.75
FN1-208ENST00000426059 ZEB1P37275 1124 aaPredicted RBP25.97■■□□□ 1.75
FN1-208ENST00000426059 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.97■■□□□ 1.75
FN1-208ENST00000426059 ABCC2Q92887 1545 aa25.96■■□□□ 1.75
FN1-208ENST00000426059 PTPRKQ15262 1439 aa25.92■■□□□ 1.74
FN1-208ENST00000426059 ADCY10Q96PN6 1610 aa25.9■■□□□ 1.74
FN1-208ENST00000426059 ZNF644Q9H582 1327 aaPredicted RBP25.9■■□□□ 1.74
FN1-208ENST00000426059 MIA2Q96PC5 1412 aa25.89■■□□□ 1.73
FN1-208ENST00000426059 RAB3GAP2Q9H2M9 1393 aa25.88■■□□□ 1.73
FN1-208ENST00000426059 TCOF1Q13428 1488 aaKnown RBP25.88■■□□□ 1.73
FN1-208ENST00000426059 GPATCH8Q9UKJ3 1502 aaKnown RBP25.85■■□□□ 1.73
FN1-208ENST00000426059 SETD5Q9C0A6 1442 aa25.84■■□□□ 1.73
FN1-208ENST00000426059 CFDP1Q9UEE9 299 aaPredicted RBP25.84■■□□□ 1.73
FN1-208ENST00000426059 CHIC2Q9UKJ5 165 aa25.84■■□□□ 1.73
FN1-208ENST00000426059 ZNF777Q9ULD5 760 aaPredicted RBP25.84■■□□□ 1.73
FN1-208ENST00000426059 ZCCHC11Q5TAX3 1644 aaKnown RBP25.83■■□□□ 1.73
FN1-208ENST00000426059 UHRF1BP1LA0JNW5 1464 aa25.82■■□□□ 1.72
FN1-208ENST00000426059 ABCC10Q5T3U5 1492 aa25.82■■□□□ 1.72
FN1-208ENST00000426059 KCNH8Q96L42 1107 aa25.81■■□□□ 1.72
FN1-208ENST00000426059 DHX57Q6P158 1386 aaKnown RBP25.8■■□□□ 1.72
FN1-208ENST00000426059 ITSN2Q9NZM3 1697 aa25.79■■□□□ 1.72
FN1-208ENST00000426059 CDC42BPAQ5VT25 1732 aa25.79■■□□□ 1.72
FN1-208ENST00000426059 KDM5BQ9UGL1 1544 aa25.79■■□□□ 1.72
FN1-208ENST00000426059 RRP7BPQ9NSQ0 103 aa25.75■■□□□ 1.71
FN1-208ENST00000426059 CAMSAP2Q08AD1 1489 aa25.75■■□□□ 1.71
FN1-208ENST00000426059 TTC37Q6PGP7 1564 aa25.71■■□□□ 1.71
FN1-208ENST00000426059 DAPK1P53355 1430 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms