RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SHROOM2Q13796 1616 aa21.38■■□□□ 1.01
HLA-DQB3-203ENST00000425319 KIF27Q86VH2 1401 aa21.34■■□□□ 1.01
HLA-DQB3-203ENST00000425319 IGF1RP08069 1367 aa21.29■■□□□ 1
HLA-DQB3-203ENST00000425319 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
HLA-DQB3-203ENST00000425319 ABCC10Q5T3U5 1492 aa21.26■□□□□ 0.99
HLA-DQB3-203ENST00000425319 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
HLA-DQB3-203ENST00000425319 PTPRGP23470 1445 aa21.22■□□□□ 0.99
HLA-DQB3-203ENST00000425319 CARMIL2Q6F5E8 1435 aa21.22■□□□□ 0.99
HLA-DQB3-203ENST00000425319 CARMIL1Q5VZK9 1371 aa21.21■□□□□ 0.99
HLA-DQB3-203ENST00000425319 MAPKBP1O60336 1514 aa21.19■□□□□ 0.98
HLA-DQB3-203ENST00000425319 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
HLA-DQB3-203ENST00000425319 TNIKQ9UKE5 1360 aa21.14■□□□□ 0.98
HLA-DQB3-203ENST00000425319 CUL7Q14999 1698 aa21.14■□□□□ 0.97
HLA-DQB3-203ENST00000425319 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
HLA-DQB3-203ENST00000425319 KIF13AQ9H1H9 1805 aa21.11■□□□□ 0.97
HLA-DQB3-203ENST00000425319 ADCY10Q96PN6 1610 aa21.07■□□□□ 0.96
HLA-DQB3-203ENST00000425319 DIP2BQ9P265 1576 aa21.05■□□□□ 0.96
HLA-DQB3-203ENST00000425319 PLB1Q6P1J6 1458 aa21.04■□□□□ 0.96
HLA-DQB3-203ENST00000425319 KDM6BO15054 1643 aa21.03■□□□□ 0.96
HLA-DQB3-203ENST00000425319 ABCC2Q92887 1545 aa21■□□□□ 0.95
HLA-DQB3-203ENST00000425319 UACAQ9BZF9 1416 aa20.99■□□□□ 0.95
HLA-DQB3-203ENST00000425319 ASXL2Q76L83 1435 aa20.97■□□□□ 0.95
HLA-DQB3-203ENST00000425319 KDM4FA0A1W2PPD8 638 aa20.96■□□□□ 0.95
HLA-DQB3-203ENST00000425319 IQGAP2Q13576 1575 aa20.95■□□□□ 0.94
HLA-DQB3-203ENST00000425319 UHRF1BP1LA0JNW5 1464 aa20.94■□□□□ 0.94
HLA-DQB3-203ENST00000425319 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
HLA-DQB3-203ENST00000425319 TSPOAP1O95153 1857 aa20.89■□□□□ 0.93
HLA-DQB3-203ENST00000425319 TEX14Q8IWB6 1497 aa20.87■□□□□ 0.93
HLA-DQB3-203ENST00000425319 GLI2P10070 1586 aa20.86■□□□□ 0.93
HLA-DQB3-203ENST00000425319 DISP1Q96F81 1524 aa20.83■□□□□ 0.92
HLA-DQB3-203ENST00000425319 KCNH8Q96L42 1107 aa20.82■□□□□ 0.92
HLA-DQB3-203ENST00000425319 UGGT2Q9NYU1 1516 aa20.82■□□□□ 0.92
HLA-DQB3-203ENST00000425319 KDM5BQ9UGL1 1544 aa20.82■□□□□ 0.92
HLA-DQB3-203ENST00000425319 GOLGA3Q08378 1498 aa20.81■□□□□ 0.92
HLA-DQB3-203ENST00000425319 EPRSP07814 1512 aaKnown RBP20.8■□□□□ 0.92
HLA-DQB3-203ENST00000425319 WDR7Q9Y4E6 1490 aa20.72■□□□□ 0.91
HLA-DQB3-203ENST00000425319 KIAA0556O60303 1618 aa20.71■□□□□ 0.91
HLA-DQB3-203ENST00000425319 CD109Q6YHK3 1445 aa20.71■□□□□ 0.91
HLA-DQB3-203ENST00000425319 ADGRL1O94910 1474 aa20.69■□□□□ 0.9
HLA-DQB3-203ENST00000425319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
HLA-DQB3-203ENST00000425319 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
HLA-DQB3-203ENST00000425319 ZCCHC11Q5TAX3 1644 aaKnown RBP20.67■□□□□ 0.9
HLA-DQB3-203ENST00000425319 MAP3K4Q9Y6R4 1608 aa20.65■□□□□ 0.9
HLA-DQB3-203ENST00000425319 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
HLA-DQB3-203ENST00000425319 P3H3Q8IVL6 736 aa20.64■□□□□ 0.89
HLA-DQB3-203ENST00000425319 MAGI3Q5TCQ9 1506 aa20.62■□□□□ 0.89
HLA-DQB3-203ENST00000425319 PPRC1Q5VV67 1664 aaKnown RBP20.61■□□□□ 0.89
HLA-DQB3-203ENST00000425319 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
HLA-DQB3-203ENST00000425319 ARID3CA6NKF2 412 aa20.6■□□□□ 0.89
HLA-DQB3-203ENST00000425319 PHLDB1Q86UU1 1377 aa20.59■□□□□ 0.89
HLA-DQB3-203ENST00000425319 ILDR1Q86SU0 546 aaPredicted RBP20.59■□□□□ 0.89
HLA-DQB3-203ENST00000425319 PRXQ9BXM0 1461 aa20.57■□□□□ 0.88
HLA-DQB3-203ENST00000425319 ABCA8O94911 1581 aa20.55■□□□□ 0.88
HLA-DQB3-203ENST00000425319 CTTNBP2Q8WZ74 1663 aa20.54■□□□□ 0.88
HLA-DQB3-203ENST00000425319 CFAP43Q8NDM7 1665 aa20.51■□□□□ 0.87
HLA-DQB3-203ENST00000425319 PLEKHD1A6NEE1 506 aa20.51■□□□□ 0.87
HLA-DQB3-203ENST00000425319 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
HLA-DQB3-203ENST00000425319 ARID4BQ4LE39 1312 aaPredicted RBP20.49■□□□□ 0.87
HLA-DQB3-203ENST00000425319 ATP10BO94823 1461 aa20.48■□□□□ 0.87
HLA-DQB3-203ENST00000425319 ARAP3Q8WWN8 1544 aa20.45■□□□□ 0.86
HLA-DQB3-203ENST00000425319 RAPGEF3O95398 923 aa20.43■□□□□ 0.86
HLA-DQB3-203ENST00000425319 EEA1Q15075 1411 aa20.43■□□□□ 0.86
HLA-DQB3-203ENST00000425319 HECW2Q9P2P5 1572 aa20.4■□□□□ 0.86
HLA-DQB3-203ENST00000425319 NEO1Q92859 1461 aa20.38■□□□□ 0.85
HLA-DQB3-203ENST00000425319 ATP1B4Q9UN42 357 aaPredicted RBP20.32■□□□□ 0.84
HLA-DQB3-203ENST00000425319 RAPGEF6Q8TEU7 1601 aa20.31■□□□□ 0.84
HLA-DQB3-203ENST00000425319 CDK11AQ9UQ88 783 aaPredicted RBP20.31■□□□□ 0.84
HLA-DQB3-203ENST00000425319 ABCA9Q8IUA7 1624 aa20.31■□□□□ 0.84
HLA-DQB3-203ENST00000425319 UBTFP17480 764 aaKnown RBP20.29■□□□□ 0.84
HLA-DQB3-203ENST00000425319 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
HLA-DQB3-203ENST00000425319 DENND4BO75064 1496 aaPredicted RBP20.28■□□□□ 0.84
HLA-DQB3-203ENST00000425319 POGZQ7Z3K3 1410 aa20.27■□□□□ 0.84
HLA-DQB3-203ENST00000425319 KIF21BO75037 1637 aa20.27■□□□□ 0.84
HLA-DQB3-203ENST00000425319 PTPRMP28827 1452 aa20.27■□□□□ 0.84
HLA-DQB3-203ENST00000425319 SAMD9Q5K651 1589 aa20.26■□□□□ 0.83
HLA-DQB3-203ENST00000425319 FHOD3Q2V2M9 1422 aa20.26■□□□□ 0.83
HLA-DQB3-203ENST00000425319 AKNAQ7Z591 1439 aa20.25■□□□□ 0.83
HLA-DQB3-203ENST00000425319 NUP153P49790 1475 aaKnown RBP20.24■□□□□ 0.83
HLA-DQB3-203ENST00000425319 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
HLA-DQB3-203ENST00000425319 EFCAB2Q5VUJ9 269 aa20.21■□□□□ 0.83
HLA-DQB3-203ENST00000425319 FANCAO15360 1455 aa20.21■□□□□ 0.83
HLA-DQB3-203ENST00000425319 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
HLA-DQB3-203ENST00000425319 MLECQ14165 292 aa20.17■□□□□ 0.82
HLA-DQB3-203ENST00000425319 EFCAB5A4FU69 1503 aa20.17■□□□□ 0.82
HLA-DQB3-203ENST00000425319 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
HLA-DQB3-203ENST00000425319 CFAP74Q9C0B2 1584 aa20.15■□□□□ 0.82
HLA-DQB3-203ENST00000425319 ADAMTSL3P82987 1691 aa20.14■□□□□ 0.81
HLA-DQB3-203ENST00000425319 MAGI2Q86UL8 1455 aa20.14■□□□□ 0.81
HLA-DQB3-203ENST00000425319 FMN1Q68DA7 1419 aa20.14■□□□□ 0.81
HLA-DQB3-203ENST00000425319 SCAPERQ9BY12 1400 aa20.12■□□□□ 0.81
HLA-DQB3-203ENST00000425319 PLCH2O75038 1416 aa20.11■□□□□ 0.81
HLA-DQB3-203ENST00000425319 ESF1Q9H501 851 aaKnown RBP20.1■□□□□ 0.81
HLA-DQB3-203ENST00000425319 BCORL1Q5H9F3 1711 aa20.1■□□□□ 0.81
HLA-DQB3-203ENST00000425319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.09■□□□□ 0.81
HLA-DQB3-203ENST00000425319 DMRT2Q9Y5R5 561 aa20.07■□□□□ 0.8
HLA-DQB3-203ENST00000425319 ZFYVE16Q7Z3T8 1539 aa20.07■□□□□ 0.8
HLA-DQB3-203ENST00000425319 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
HLA-DQB3-203ENST00000425319 CLIP1P30622 1438 aa20.06■□□□□ 0.8
HLA-DQB3-203ENST00000425319 HSPA2P54652 639 aa20.06■□□□□ 0.8
HLA-DQB3-203ENST00000425319 ARHGEF40Q8TER5 1519 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms