RNA–Protein interactions for RNA: ENST00000425013.6

RNF216-205, Transcript of ring finger protein 216, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RNF216, Length 5,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216-205ENST00000425013 GOLGA3Q08378 1498 aa17.27■□□□□ 0.36
RNF216-205ENST00000425013 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.35
RNF216-205ENST00000425013 DDRGK1Q96HY6 314 aa17.26■□□□□ 0.35
RNF216-205ENST00000425013 ZBTB7CA1YPR0 619 aa17.26■□□□□ 0.35
RNF216-205ENST00000425013 TMC1Q8TDI8 760 aa17.26■□□□□ 0.35
RNF216-205ENST00000425013 SALL2Q9Y467 1007 aaPredicted RBP17.24■□□□□ 0.35
RNF216-205ENST00000425013 EEA1Q15075 1411 aa17.24■□□□□ 0.35
RNF216-205ENST00000425013 ZRSR1Q15695 479 aaKnown RBP17.24■□□□□ 0.35
RNF216-205ENST00000425013 C14orf37Q86TY3 774 aa17.21■□□□□ 0.35
RNF216-205ENST00000425013 TULP1O00294 542 aaPredicted RBP17.19■□□□□ 0.34
RNF216-205ENST00000425013 HAP1P54257 671 aaPredicted RBP17.18■□□□□ 0.34
RNF216-205ENST00000425013 ERCC6Q03468 1493 aa17.17■□□□□ 0.34
RNF216-205ENST00000425013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■■□□ 16.8
RNF216-205ENST00000425013 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
RNF216-205ENST00000425013 GOLGA6L22H0YM25 854 aa17.16■□□□□ 0.34
RNF216-205ENST00000425013 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
RNF216-205ENST00000425013 EIF4G2P78344 907 aaKnown RBP eCLIP17.14■□□□□ 0.334e-9■■■■■ 26.9
RNF216-205ENST00000425013 TRIM44Q96DX7 344 aaPredicted RBP17.14■□□□□ 0.33
RNF216-205ENST00000425013 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
RNF216-205ENST00000425013 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
RNF216-205ENST00000425013 TNNT2P45379 298 aaPredicted RBP17.13■□□□□ 0.33
RNF216-205ENST00000425013 BECN1Q14457 450 aa17.12■□□□□ 0.33
RNF216-205ENST00000425013 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
RNF216-205ENST00000425013 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
RNF216-205ENST00000425013 PPP4R2Q9NY27 417 aa17.1■□□□□ 0.33
RNF216-205ENST00000425013 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
RNF216-205ENST00000425013 CHIC2Q9UKJ5 165 aa17.1■□□□□ 0.33
RNF216-205ENST00000425013 PPM1GO15355 546 aaPredicted RBP17.09■□□□□ 0.33
RNF216-205ENST00000425013 PTMAP06454 111 aaKnown RBP17.08■□□□□ 0.32
RNF216-205ENST00000425013 CASC1Q6TDU7 716 aa17.06■□□□□ 0.32
RNF216-205ENST00000425013 MTUS2Q5JR59 1369 aa17.05■□□□□ 0.32
RNF216-205ENST00000425013 NPHP1O15259 732 aa17.05■□□□□ 0.32
RNF216-205ENST00000425013 RB1CC1Q8TDY2 1594 aa17.05■□□□□ 0.32
RNF216-205ENST00000425013 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
RNF216-205ENST00000425013 TSPY4P0CV99 314 aa17.04■□□□□ 0.32
RNF216-205ENST00000425013 TSPY10P0CW01 314 aa17.04■□□□□ 0.32
RNF216-205ENST00000425013 KDM2AQ9Y2K7 1162 aa17.01■□□□□ 0.31
RNF216-205ENST00000425013 DNTTIP2Q5QJE6 756 aaKnown RBP17■□□□□ 0.31
RNF216-205ENST00000425013 GOLGA6L6A8MZA4 724 aa16.98■□□□□ 0.31
RNF216-205ENST00000425013 RBM19Q9Y4C8 960 aaKnown RBP16.98■□□□□ 0.31
RNF216-205ENST00000425013 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
RNF216-205ENST00000425013 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.31
RNF216-205ENST00000425013 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
RNF216-205ENST00000425013 LAS1LQ9Y4W2 734 aaKnown RBP16.95■□□□□ 0.3
RNF216-205ENST00000425013 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
RNF216-205ENST00000425013 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
RNF216-205ENST00000425013 CCER2I3L3R5 266 aa16.93■□□□□ 0.3
RNF216-205ENST00000425013 RTN4Q9NQC3 1192 aaKnown RBP16.93■□□□□ 0.3
RNF216-205ENST00000425013 RRP7BPQ9NSQ0 103 aa16.92■□□□□ 0.3
RNF216-205ENST00000425013 NRDCO43847 1150 aa16.92■□□□□ 0.3
RNF216-205ENST00000425013 TPRNQ4KMQ1 711 aa16.92■□□□□ 0.3
RNF216-205ENST00000425013 CLSTN1O94985 981 aa16.91■□□□□ 0.3
RNF216-205ENST00000425013 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
RNF216-205ENST00000425013 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
RNF216-205ENST00000425013 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
RNF216-205ENST00000425013 TSHZ2Q9NRE2 1034 aa16.88■□□□□ 0.29
RNF216-205ENST00000425013 FGD1P98174 961 aa16.88■□□□□ 0.29
RNF216-205ENST00000425013 ARID4BQ4LE39 1312 aaPredicted RBP16.88■□□□□ 0.29
RNF216-205ENST00000425013 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
RNF216-205ENST00000425013 B4GALNT3Q6L9W6 998 aa16.87■□□□□ 0.29
RNF216-205ENST00000425013 FTSJ3Q8IY81 847 aaKnown RBP16.86■□□□□ 0.29
RNF216-205ENST00000425013 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
RNF216-205ENST00000425013 NAP1L5Q96NT1 182 aaPredicted RBP16.86■□□□□ 0.29
RNF216-205ENST00000425013 OS9Q13438 667 aaPredicted RBP16.83■□□□□ 0.29
RNF216-205ENST00000425013 PLCB2Q00722 1185 aa16.83■□□□□ 0.29
RNF216-205ENST00000425013 LMOD2Q6P5Q4 547 aa16.83■□□□□ 0.29
RNF216-205ENST00000425013 CCNB3Q8WWL7 1395 aa16.83■□□□□ 0.28
RNF216-205ENST00000425013 CDCA8Q53HL2 280 aa16.82■□□□□ 0.28
RNF216-205ENST00000425013 L1TD1Q5T7N2 865 aaKnown RBP16.82■□□□□ 0.28
RNF216-205ENST00000425013 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
RNF216-205ENST00000425013 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
RNF216-205ENST00000425013 NAP1L2Q9ULW6 460 aaPredicted RBP16.81■□□□□ 0.28
RNF216-205ENST00000425013 CHMP4BQ9H444 224 aaKnown RBP16.8■□□□□ 0.28
RNF216-205ENST00000425013 KCNJ4P48050 445 aa16.8■□□□□ 0.28
RNF216-205ENST00000425013 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
RNF216-205ENST00000425013 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.27
RNF216-205ENST00000425013 NUDCQ9Y266 331 aa16.77■□□□□ 0.27
RNF216-205ENST00000425013 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
RNF216-205ENST00000425013 KNSTRNQ9Y448 316 aa16.76■□□□□ 0.27
RNF216-205ENST00000425013 GOLGA6L4A6NEF3 574 aa16.75■□□□□ 0.27
RNF216-205ENST00000425013 CARD11Q9BXL7 1154 aa16.74■□□□□ 0.27
RNF216-205ENST00000425013 SETD5Q9C0A6 1442 aa16.74■□□□□ 0.27
RNF216-205ENST00000425013 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
RNF216-205ENST00000425013 SOGA1O94964 1423 aa16.72■□□□□ 0.27
RNF216-205ENST00000425013 CHAF1AQ13111 956 aaPredicted RBP16.72■□□□□ 0.27
RNF216-205ENST00000425013 PNNQ9H307 717 aaKnown RBP16.72■□□□□ 0.27
RNF216-205ENST00000425013 RGS3P49796 1198 aa16.72■□□□□ 0.27
RNF216-205ENST00000425013 KCNH8Q96L42 1107 aa16.72■□□□□ 0.27
RNF216-205ENST00000425013 NACADO15069 1562 aa16.71■□□□□ 0.27
RNF216-205ENST00000425013 HSP90AB1P08238 724 aaKnown RBP16.71■□□□□ 0.27
RNF216-205ENST00000425013 PRM3Q9NNZ6 103 aa16.71■□□□□ 0.26
RNF216-205ENST00000425013 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
RNF216-205ENST00000425013 POGKQ9P215 609 aa16.7■□□□□ 0.26
RNF216-205ENST00000425013 MS4A1P11836 297 aa16.69■□□□□ 0.26
RNF216-205ENST00000425013 KIAA2012Q0VF49 1180 aa16.69■□□□□ 0.26
RNF216-205ENST00000425013 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
RNF216-205ENST00000425013 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
RNF216-205ENST00000425013 RGL3Q3MIN7 710 aa16.67■□□□□ 0.26
RNF216-205ENST00000425013 NEUROD2Q15784 382 aa16.66■□□□□ 0.26
RNF216-205ENST00000425013 HSPA5P11021 654 aaKnown RBP16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms