RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 TPRNQ4KMQ1 711 aa15.94■□□□□ 0.14
LAMA4-207ENST00000424408 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
LAMA4-207ENST00000424408 AMER1Q5JTC6 1135 aaPredicted RBP15.89■□□□□ 0.13
LAMA4-207ENST00000424408 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
LAMA4-207ENST00000424408 DEKP35659 375 aaKnown RBP15.87■□□□□ 0.13
LAMA4-207ENST00000424408 ZRSR1Q15695 479 aaKnown RBP15.86■□□□□ 0.13
LAMA4-207ENST00000424408 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
LAMA4-207ENST00000424408 CHIC2Q9UKJ5 165 aa15.86■□□□□ 0.13
LAMA4-207ENST00000424408 KDM2AQ9Y2K7 1162 aa15.86■□□□□ 0.13
LAMA4-207ENST00000424408 SENP3-EIF4A1A0A087X0R7 540 aa15.85■□□□□ 0.13
LAMA4-207ENST00000424408 PLCB2Q00722 1185 aa15.82■□□□□ 0.12
LAMA4-207ENST00000424408 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
LAMA4-207ENST00000424408 CASC1Q6TDU7 716 aa15.8■□□□□ 0.12
LAMA4-207ENST00000424408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.12
LAMA4-207ENST00000424408 ABCC9O60706 1549 aa15.79■□□□□ 0.12
LAMA4-207ENST00000424408 EIF4G2P78344 907 aaKnown RBP eCLIP15.79■□□□□ 0.12
LAMA4-207ENST00000424408 ARID4BQ4LE39 1312 aaPredicted RBP15.77■□□□□ 0.12
LAMA4-207ENST00000424408 ESF1Q9H501 851 aaKnown RBP15.76■□□□□ 0.11
LAMA4-207ENST00000424408 RGS3P49796 1198 aa15.75■□□□□ 0.11
LAMA4-207ENST00000424408 HSP90AB1P08238 724 aaKnown RBP15.74■□□□□ 0.11
LAMA4-207ENST00000424408 GOLGA6L6A8MZA4 724 aa15.74■□□□□ 0.11
LAMA4-207ENST00000424408 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
LAMA4-207ENST00000424408 L1TD1Q5T7N2 865 aaKnown RBP15.73■□□□□ 0.11
LAMA4-207ENST00000424408 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.73■□□□□ 0.11
LAMA4-207ENST00000424408 FTSJ3Q8IY81 847 aaKnown RBP15.71■□□□□ 0.11
LAMA4-207ENST00000424408 CHAF1AQ13111 956 aaPredicted RBP15.71■□□□□ 0.11
LAMA4-207ENST00000424408 PLPPR3Q6T4P5 718 aa15.71■□□□□ 0.11
LAMA4-207ENST00000424408 B4GALNT3Q6L9W6 998 aa15.69■□□□□ 0.1
LAMA4-207ENST00000424408 TULP1O00294 542 aaPredicted RBP15.67■□□□□ 0.1
LAMA4-207ENST00000424408 RBM19Q9Y4C8 960 aaKnown RBP15.66■□□□□ 0.1
LAMA4-207ENST00000424408 ARID3AQ99856 593 aa15.65■□□□□ 0.1
LAMA4-207ENST00000424408 ZBTB7CA1YPR0 619 aa15.64■□□□□ 0.09
LAMA4-207ENST00000424408 SPRYD3Q8NCJ5 442 aa15.64■□□□□ 0.09
LAMA4-207ENST00000424408 TAOK2Q9UL54 1235 aa15.64■□□□□ 0.09
LAMA4-207ENST00000424408 HSCBQ8IWL3 235 aa15.63■□□□□ 0.09
LAMA4-207ENST00000424408 NRDCO43847 1150 aa15.62■□□□□ 0.09
LAMA4-207ENST00000424408 FRAT1Q92837 279 aaPredicted RBP15.61■□□□□ 0.09
LAMA4-207ENST00000424408 A0A0G2JS52 829 aa15.59■□□□□ 0.09
LAMA4-207ENST00000424408 CFAP53Q96M91 514 aa15.59■□□□□ 0.09
LAMA4-207ENST00000424408 DRC7Q8IY82 874 aa15.59■□□□□ 0.09
LAMA4-207ENST00000424408 RRP7BPQ9NSQ0 103 aa15.59■□□□□ 0.09
LAMA4-207ENST00000424408 NEUROD2Q15784 382 aa15.59■□□□□ 0.09
LAMA4-207ENST00000424408 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.09
LAMA4-207ENST00000424408 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.08
LAMA4-207ENST00000424408 KNSTRNQ9Y448 316 aa15.57■□□□□ 0.08
LAMA4-207ENST00000424408 MTUS2Q5JR59 1369 aa15.56■□□□□ 0.08
LAMA4-207ENST00000424408 TSPY4P0CV99 314 aa15.56■□□□□ 0.08
LAMA4-207ENST00000424408 TSPY10P0CW01 314 aa15.56■□□□□ 0.08
LAMA4-207ENST00000424408 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
LAMA4-207ENST00000424408 GOLGA6L4A6NEF3 574 aa15.54■□□□□ 0.08
LAMA4-207ENST00000424408 PNNQ9H307 717 aaKnown RBP15.53■□□□□ 0.08
LAMA4-207ENST00000424408 C14orf37Q86TY3 774 aa15.53■□□□□ 0.08
LAMA4-207ENST00000424408 TNNT3P45378 269 aaPredicted RBP15.52■□□□□ 0.08
LAMA4-207ENST00000424408 NAP1L2Q9ULW6 460 aaPredicted RBP15.52■□□□□ 0.07
LAMA4-207ENST00000424408 FGD1P98174 961 aa15.51■□□□□ 0.07
LAMA4-207ENST00000424408 GZF1Q9H116 711 aaPredicted RBP15.51■□□□□ 0.07
LAMA4-207ENST00000424408 MAPK8IP3Q9UPT6 1336 aa15.5■□□□□ 0.07
LAMA4-207ENST00000424408 CLIP1P30622 1438 aa15.5■□□□□ 0.07
LAMA4-207ENST00000424408 RGL3Q3MIN7 710 aa15.49■□□□□ 0.07
LAMA4-207ENST00000424408 KCNJ4P48050 445 aa15.49■□□□□ 0.07
LAMA4-207ENST00000424408 MYO15BQ96JP2 1530 aa15.48■□□□□ 0.07
LAMA4-207ENST00000424408 CARD11Q9BXL7 1154 aa15.48■□□□□ 0.07
LAMA4-207ENST00000424408 OS9Q13438 667 aaPredicted RBP15.47■□□□□ 0.07
LAMA4-207ENST00000424408 CC2D1BQ5T0F9 858 aaKnown RBP15.47■□□□□ 0.07
LAMA4-207ENST00000424408 KIAA2012Q0VF49 1180 aa15.46■□□□□ 0.07
LAMA4-207ENST00000424408 CHMP4BQ9H444 224 aaKnown RBP15.46■□□□□ 0.07
LAMA4-207ENST00000424408 CDCA8Q53HL2 280 aa15.46■□□□□ 0.07
LAMA4-207ENST00000424408 MS4A1P11836 297 aa15.46■□□□□ 0.06
LAMA4-207ENST00000424408 PTMSP20962 102 aa15.44■□□□□ 0.06
LAMA4-207ENST00000424408 GBP4Q96PP9 640 aa15.44■□□□□ 0.06
LAMA4-207ENST00000424408 TSHZ2Q9NRE2 1034 aa15.44■□□□□ 0.06
LAMA4-207ENST00000424408 MCCP23508 829 aa15.43■□□□□ 0.06
LAMA4-207ENST00000424408 GOLGA6L3A6NEY3 463 aa15.43■□□□□ 0.06
LAMA4-207ENST00000424408 SLKQ9H2G2 1235 aaPredicted RBP15.42■□□□□ 0.06
LAMA4-207ENST00000424408 SIN3AQ96ST3 1273 aa15.42■□□□□ 0.06
LAMA4-207ENST00000424408 NUDCQ9Y266 331 aa15.41■□□□□ 0.06
LAMA4-207ENST00000424408 NPM1P06748 294 aaKnown RBP eCLIP15.41■□□□□ 0.06
LAMA4-207ENST00000424408 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
LAMA4-207ENST00000424408 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
LAMA4-207ENST00000424408 HSP90AA2PQ14568 343 aaPredicted RBP15.38■□□□□ 0.05
LAMA4-207ENST00000424408 IPO9Q96P70 1041 aaKnown RBP15.36■□□□□ 0.05
LAMA4-207ENST00000424408 CCER2I3L3R5 266 aa15.35■□□□□ 0.05
LAMA4-207ENST00000424408 U2SURPO15042 1029 aaKnown RBP15.35■□□□□ 0.05
LAMA4-207ENST00000424408 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
LAMA4-207ENST00000424408 VSIG10Q8N0Z9 540 aa15.34■□□□□ 0.05
LAMA4-207ENST00000424408 NOC3LQ8WTT2 800 aaKnown RBP15.33■□□□□ 0.05
LAMA4-207ENST00000424408 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.05
LAMA4-207ENST00000424408 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.04
LAMA4-207ENST00000424408 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.04
LAMA4-207ENST00000424408 CLSTN1O94985 981 aa15.32■□□□□ 0.04
LAMA4-207ENST00000424408 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
LAMA4-207ENST00000424408 GOLGA3Q08378 1498 aa15.32■□□□□ 0.04
LAMA4-207ENST00000424408 SYAP1Q96A49 352 aaPredicted RBP15.32■□□□□ 0.04
LAMA4-207ENST00000424408 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
LAMA4-207ENST00000424408 GNL2Q13823 731 aaKnown RBP15.31■□□□□ 0.04
LAMA4-207ENST00000424408 GOLGA6L1Q8N7Z2 621 aa15.31■□□□□ 0.04
LAMA4-207ENST00000424408 APBB1O00213 710 aa15.28■□□□□ 0.04
LAMA4-207ENST00000424408 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
LAMA4-207ENST00000424408 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.03
LAMA4-207ENST00000424408 GOLGA2Q08379 1002 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms