RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 FAM69CQ0P6D2 419 aa30.05■■■□□ 2.4
CHCHD3-202ENST00000423635 ABCC10Q5T3U5 1492 aa30.04■■■□□ 2.4
CHCHD3-202ENST00000423635 NPM1P06748 294 aaKnown RBP eCLIP30.03■■■□□ 2.4
CHCHD3-202ENST00000423635 MAPKBP1O60336 1514 aa29.98■■■□□ 2.39
CHCHD3-202ENST00000423635 RUSC2Q8N2Y8 1516 aa29.97■■■□□ 2.39
CHCHD3-202ENST00000423635 DIP2BQ9P265 1576 aa29.88■■■□□ 2.37
CHCHD3-202ENST00000423635 ADCY10Q96PN6 1610 aa29.88■■■□□ 2.37
CHCHD3-202ENST00000423635 KIAA0586Q9BVV6 1533 aa29.86■■■□□ 2.37
CHCHD3-202ENST00000423635 IGF1RP08069 1367 aa29.82■■■□□ 2.36
CHCHD3-202ENST00000423635 KDM4FA0A1W2PPD8 638 aa29.78■■■□□ 2.36
CHCHD3-202ENST00000423635 KDM6BO15054 1643 aa29.75■■■□□ 2.35
CHCHD3-202ENST00000423635 KIF27Q86VH2 1401 aa29.7■■■□□ 2.35
CHCHD3-202ENST00000423635 PTPRGP23470 1445 aa29.68■■■□□ 2.34
CHCHD3-202ENST00000423635 CUL7Q14999 1698 aa29.67■■■□□ 2.34
CHCHD3-202ENST00000423635 TSPOAP1O95153 1857 aa29.64■■■□□ 2.34
CHCHD3-202ENST00000423635 TNIKQ9UKE5 1360 aa29.58■■■□□ 2.33
CHCHD3-202ENST00000423635 CARMIL1Q5VZK9 1371 aa29.57■■■□□ 2.32
CHCHD3-202ENST00000423635 ABCC2Q92887 1545 aa29.57■■■□□ 2.32
CHCHD3-202ENST00000423635 CARMIL2Q6F5E8 1435 aa29.56■■■□□ 2.32
CHCHD3-202ENST00000423635 PLB1Q6P1J6 1458 aa29.52■■■□□ 2.32
CHCHD3-202ENST00000423635 ASXL2Q76L83 1435 aa29.51■■■□□ 2.32
CHCHD3-202ENST00000423635 TTBK1Q5TCY1 1321 aaPredicted RBP29.51■■■□□ 2.31
CHCHD3-202ENST00000423635 GLI2P10070 1586 aa29.51■■■□□ 2.31
CHCHD3-202ENST00000423635 UHRF1BP1LA0JNW5 1464 aa29.49■■■□□ 2.31
CHCHD3-202ENST00000423635 PPRC1Q5VV67 1664 aaKnown RBP29.45■■■□□ 2.3
CHCHD3-202ENST00000423635 UACAQ9BZF9 1416 aa29.43■■■□□ 2.3
CHCHD3-202ENST00000423635 IQGAP2Q13576 1575 aa29.41■■■□□ 2.3
CHCHD3-202ENST00000423635 DISP1Q96F81 1524 aa29.37■■■□□ 2.29
CHCHD3-202ENST00000423635 ILDR1Q86SU0 546 aaPredicted RBP29.37■■■□□ 2.29
CHCHD3-202ENST00000423635 COL17A1Q9UMD9 1497 aaPredicted RBP29.35■■■□□ 2.29
CHCHD3-202ENST00000423635 KDM5BQ9UGL1 1544 aa29.35■■■□□ 2.29
CHCHD3-202ENST00000423635 EPRSP07814 1512 aaKnown RBP29.34■■■□□ 2.29
CHCHD3-202ENST00000423635 ADGRL1O94910 1474 aa29.34■■■□□ 2.29
CHCHD3-202ENST00000423635 MAP3K4Q9Y6R4 1608 aa29.28■■■□□ 2.28
CHCHD3-202ENST00000423635 UGGT2Q9NYU1 1516 aa29.27■■■□□ 2.28
CHCHD3-202ENST00000423635 TEX14Q8IWB6 1497 aa29.26■■■□□ 2.27
CHCHD3-202ENST00000423635 RAPGEF2Q9Y4G8 1499 aa29.22■■■□□ 2.27
CHCHD3-202ENST00000423635 ZCCHC11Q5TAX3 1644 aaKnown RBP29.2■■■□□ 2.27
CHCHD3-202ENST00000423635 KIAA0556O60303 1618 aa29.16■■■□□ 2.26
CHCHD3-202ENST00000423635 WDR7Q9Y4E6 1490 aa29.13■■■□□ 2.25
CHCHD3-202ENST00000423635 HECW2Q9P2P5 1572 aa29.08■■■□□ 2.25
CHCHD3-202ENST00000423635 MAGI3Q5TCQ9 1506 aa29.05■■■□□ 2.24
CHCHD3-202ENST00000423635 CD109Q6YHK3 1445 aa29.04■■■□□ 2.24
CHCHD3-202ENST00000423635 KCNH8Q96L42 1107 aa28.99■■■□□ 2.23
CHCHD3-202ENST00000423635 GOLGA3Q08378 1498 aa28.98■■■□□ 2.23
CHCHD3-202ENST00000423635 CFAP43Q8NDM7 1665 aa28.97■■■□□ 2.23
CHCHD3-202ENST00000423635 ABCA8O94911 1581 aa28.96■■■□□ 2.23
CHCHD3-202ENST00000423635 CTTNBP2Q8WZ74 1663 aa28.9■■■□□ 2.22
CHCHD3-202ENST00000423635 ARAP3Q8WWN8 1544 aa28.84■■■□□ 2.21
CHCHD3-202ENST00000423635 PRXQ9BXM0 1461 aa28.81■■■□□ 2.2
CHCHD3-202ENST00000423635 PHLDB1Q86UU1 1377 aa28.78■■■□□ 2.2
CHCHD3-202ENST00000423635 KIF21BO75037 1637 aa28.77■■■□□ 2.2
CHCHD3-202ENST00000423635 FAM9AQ8IZU1 332 aaPredicted RBP28.77■■■□□ 2.2
CHCHD3-202ENST00000423635 ATP10BO94823 1461 aa28.76■■■□□ 2.2
CHCHD3-202ENST00000423635 FBXO41Q8TF61 875 aa28.69■■■□□ 2.18
CHCHD3-202ENST00000423635 ARID3CA6NKF2 412 aa28.69■■■□□ 2.18
CHCHD3-202ENST00000423635 P3H3Q8IVL6 736 aa28.68■■■□□ 2.18
CHCHD3-202ENST00000423635 ABCA9Q8IUA7 1624 aa28.67■■■□□ 2.18
CHCHD3-202ENST00000423635 PTPRMP28827 1452 aa28.66■■■□□ 2.18
CHCHD3-202ENST00000423635 ADAMTSL3P82987 1691 aa28.65■■■□□ 2.18
CHCHD3-202ENST00000423635 RAPGEF3O95398 923 aa28.65■■■□□ 2.18
CHCHD3-202ENST00000423635 NEO1Q92859 1461 aa28.62■■■□□ 2.17
CHCHD3-202ENST00000423635 SAMD9Q5K651 1589 aa28.53■■■□□ 2.16
CHCHD3-202ENST00000423635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.51■■■□□ 2.15
CHCHD3-202ENST00000423635 HNRNPUL2Q1KMD3 747 aaKnown RBP28.51■■■□□ 2.15
CHCHD3-202ENST00000423635 RAPGEF6Q8TEU7 1601 aa28.51■■■□□ 2.15
CHCHD3-202ENST00000423635 BCORL1Q5H9F3 1711 aa28.51■■■□□ 2.15
CHCHD3-202ENST00000423635 ARID4BQ4LE39 1312 aaPredicted RBP28.5■■■□□ 2.15
CHCHD3-202ENST00000423635 FRMPD1Q5SYB0 1578 aa28.49■■■□□ 2.15
CHCHD3-202ENST00000423635 CSRNP3Q8WYN3 585 aa28.49■■■□□ 2.15
CHCHD3-202ENST00000423635 PCF11O94913 1555 aaKnown RBP28.45■■■□□ 2.14
CHCHD3-202ENST00000423635 NUP153P49790 1475 aaKnown RBP28.45■■■□□ 2.14
CHCHD3-202ENST00000423635 MADDQ8WXG6 1647 aa28.44■■■□□ 2.14
CHCHD3-202ENST00000423635 LMTK3Q96Q04 1460 aa28.44■■■□□ 2.14
CHCHD3-202ENST00000423635 PLEKHD1A6NEE1 506 aa28.42■■■□□ 2.14
CHCHD3-202ENST00000423635 DENND4BO75064 1496 aaPredicted RBP28.41■■■□□ 2.14
CHCHD3-202ENST00000423635 FHOD3Q2V2M9 1422 aa28.38■■■□□ 2.13
CHCHD3-202ENST00000423635 AKNAQ7Z591 1439 aa28.38■■■□□ 2.13
CHCHD3-202ENST00000423635 ARHGEF40Q8TER5 1519 aa28.36■■■□□ 2.13
CHCHD3-202ENST00000423635 RICTORQ6R327 1708 aa28.34■■■□□ 2.13
CHCHD3-202ENST00000423635 FANCAO15360 1455 aa28.32■■■□□ 2.12
CHCHD3-202ENST00000423635 RIMS1Q86UR5 1692 aaKnown RBP28.3■■■□□ 2.12
CHCHD3-202ENST00000423635 POGZQ7Z3K3 1410 aa28.29■■■□□ 2.12
CHCHD3-202ENST00000423635 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.29■■■□□ 2.122e-6■■■□□ 15.1
CHCHD3-202ENST00000423635 RANGAP1P46060 587 aaPredicted RBP28.27■■■□□ 2.12
CHCHD3-202ENST00000423635 HSPA2P54652 639 aa28.27■■■□□ 2.12
CHCHD3-202ENST00000423635 CFAP74Q9C0B2 1584 aa28.27■■■□□ 2.12
CHCHD3-202ENST00000423635 ZMYM4Q5VZL5 1548 aa28.26■■■□□ 2.11
CHCHD3-202ENST00000423635 MAGI2Q86UL8 1455 aa28.25■■■□□ 2.11
CHCHD3-202ENST00000423635 EEA1Q15075 1411 aa28.23■■■□□ 2.11
CHCHD3-202ENST00000423635 YEATS2Q9ULM3 1422 aa28.22■■■□□ 2.11
CHCHD3-202ENST00000423635 ZFYVE16Q7Z3T8 1539 aa28.21■■■□□ 2.11
CHCHD3-202ENST00000423635 EFCAB5A4FU69 1503 aa28.21■■■□□ 2.11
CHCHD3-202ENST00000423635 PLPPR3Q6T4P5 718 aa28.18■■■□□ 2.1
CHCHD3-202ENST00000423635 TTC37Q6PGP7 1564 aa28.18■■■□□ 2.1
CHCHD3-202ENST00000423635 SIGLEC1Q9BZZ2 1709 aa28.18■■■□□ 2.1
CHCHD3-202ENST00000423635 CERKQ8TCT0 537 aa28.17■■■□□ 2.1
CHCHD3-202ENST00000423635 PLCH2O75038 1416 aa28.15■■■□□ 2.1
CHCHD3-202ENST00000423635 HECW1Q76N89 1606 aa28.15■■■□□ 2.1
CHCHD3-202ENST00000423635 MLECQ14165 292 aa28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 208.7 ms