RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 AQRO60306 1485 aaKnown RBP eCLIP35.33■■■■□ 3.253e-11■■■■■ 54.3
LSM8-203ENST00000422760 ZNF608Q9ULD9 1512 aaPredicted RBP35.26■■■■□ 3.24
LSM8-203ENST00000422760 ADAMTS12P58397 1594 aa35.26■■■■□ 3.23
LSM8-203ENST00000422760 EFCAB5A4FU69 1503 aa35.24■■■■□ 3.23
LSM8-203ENST00000422760 GRIN2BQ13224 1484 aa35.24■■■■□ 3.23
LSM8-203ENST00000422760 FHAD1B1AJZ9 1412 aa35.2■■■■□ 3.23
LSM8-203ENST00000422760 EIF4G3O43432 1585 aaKnown RBP35.18■■■■□ 3.22
LSM8-203ENST00000422760 FHOD3Q2V2M9 1422 aa35.09■■■■□ 3.21
LSM8-203ENST00000422760 PCF11O94913 1555 aaKnown RBP35.07■■■■□ 3.2
LSM8-203ENST00000422760 SAMD9Q5K651 1589 aa35.07■■■■□ 3.2
LSM8-203ENST00000422760 P3H3Q8IVL6 736 aa35.04■■■■□ 3.2
LSM8-203ENST00000422760 KANK4Q5T7N3 995 aaPredicted RBP35.04■■■■□ 3.2
LSM8-203ENST00000422760 TIAM1Q13009 1591 aa35.02■■■■□ 3.2
LSM8-203ENST00000422760 MAP3K1Q13233 1512 aa35.01■■■■□ 3.2
LSM8-203ENST00000422760 SNAPC4Q5SXM2 1469 aa35.01■■■■□ 3.2
LSM8-203ENST00000422760 CFAP43Q8NDM7 1665 aa34.95■■■■□ 3.19
LSM8-203ENST00000422760 IQGAP2Q13576 1575 aa34.95■■■■□ 3.19
LSM8-203ENST00000422760 FYCO1Q9BQS8 1478 aa34.94■■■■□ 3.18
LSM8-203ENST00000422760 FMN1Q68DA7 1419 aa34.91■■■■□ 3.18
LSM8-203ENST00000422760 MAGI1Q96QZ7 1491 aaPredicted RBP34.9■■■■□ 3.18
LSM8-203ENST00000422760 CASKIN1Q8WXD9 1431 aa34.89■■■■□ 3.18
LSM8-203ENST00000422760 GRIN2AQ12879 1464 aa34.86■■■■□ 3.17
LSM8-203ENST00000422760 LRRC9Q6ZRR7 1453 aa34.82■■■■□ 3.16
LSM8-203ENST00000422760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.81■■■■□ 3.16
LSM8-203ENST00000422760 CCER1Q8TC90 406 aaPredicted RBP34.81■■■■□ 3.16
LSM8-203ENST00000422760 SYNJ2O15056 1496 aa34.77■■■■□ 3.16
LSM8-203ENST00000422760 RRBP1Q9P2E9 1410 aaKnown RBP34.76■■■■□ 3.16
LSM8-203ENST00000422760 UGGT2Q9NYU1 1516 aa34.75■■■■□ 3.15
LSM8-203ENST00000422760 KIAA0586Q9BVV6 1533 aa34.74■■■■□ 3.15
LSM8-203ENST00000422760 HNRNPUL2Q1KMD3 747 aaKnown RBP34.73■■■■□ 3.15
LSM8-203ENST00000422760 ATP1B4Q9UN42 357 aaPredicted RBP34.73■■■■□ 3.15
LSM8-203ENST00000422760 LRRIQ1Q96JM4 1722 aa34.69■■■■□ 3.14
LSM8-203ENST00000422760 CEP170Q5SW79 1584 aa34.66■■■■□ 3.14
LSM8-203ENST00000422760 CHMP7Q8WUX9 453 aaPredicted RBP34.63■■■■□ 3.13
LSM8-203ENST00000422760 CCNB3Q8WWL7 1395 aa34.61■■■■□ 3.13
LSM8-203ENST00000422760 KIAA0556O60303 1618 aa34.61■■■■□ 3.13
LSM8-203ENST00000422760 DISP1Q96F81 1524 aa34.57■■■■□ 3.12
LSM8-203ENST00000422760 PHLDB1Q86UU1 1377 aa34.55■■■■□ 3.12
LSM8-203ENST00000422760 NUP160Q12769 1436 aa34.55■■■■□ 3.12
LSM8-203ENST00000422760 HECW1Q76N89 1606 aa34.55■■■■□ 3.12
LSM8-203ENST00000422760 FBLN2P98095 1184 aa34.53■■■■□ 3.12
LSM8-203ENST00000422760 CCDC18Q5T9S5 1454 aa34.48■■■■□ 3.11
LSM8-203ENST00000422760 MTUS2Q5JR59 1369 aa34.44■■■■□ 3.1
LSM8-203ENST00000422760 EHBP1L1Q8N3D4 1523 aa34.42■■■■□ 3.1
LSM8-203ENST00000422760 EPRSP07814 1512 aaKnown RBP34.39■■■■□ 3.1
LSM8-203ENST00000422760 SUPT6HQ7KZ85 1726 aaKnown RBP34.36■■■■□ 3.09
LSM8-203ENST00000422760 MAGI3Q5TCQ9 1506 aa34.36■■■■□ 3.09
LSM8-203ENST00000422760 CHD1O14646 1710 aa34.35■■■■□ 3.09
LSM8-203ENST00000422760 CDK13Q14004 1512 aaKnown RBP34.33■■■■□ 3.09
LSM8-203ENST00000422760 RAPGEF6Q8TEU7 1601 aa34.31■■■■□ 3.08
LSM8-203ENST00000422760 NCOA2Q15596 1464 aa34.31■■■■□ 3.08
LSM8-203ENST00000422760 CARMIL2Q6F5E8 1435 aa34.27■■■■□ 3.08
LSM8-203ENST00000422760 ITGAEP38570 1179 aa34.27■■■■□ 3.08
LSM8-203ENST00000422760 JPH4Q96JJ6 628 aa34.26■■■■□ 3.08
LSM8-203ENST00000422760 FGD6Q6ZV73 1430 aa34.26■■■■□ 3.07
LSM8-203ENST00000422760 NUP153P49790 1475 aaKnown RBP34.25■■■■□ 3.07
LSM8-203ENST00000422760 ARHGEF11O15085 1522 aa34.24■■■■□ 3.07
LSM8-203ENST00000422760 FAM50AQ14320 339 aaKnown RBP34.24■■■■□ 3.07
LSM8-203ENST00000422760 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.22■■■■□ 3.07
LSM8-203ENST00000422760 MYOM3Q5VTT5 1437 aa34.2■■■■□ 3.07
LSM8-203ENST00000422760 ARID3CA6NKF2 412 aa34.15■■■■□ 3.06
LSM8-203ENST00000422760 PLB1Q6P1J6 1458 aa34.14■■■■□ 3.06
LSM8-203ENST00000422760 DHX57Q6P158 1386 aaKnown RBP34.12■■■■□ 3.05
LSM8-203ENST00000422760 CLSPNQ9HAW4 1339 aa34.09■■■■□ 3.05
LSM8-203ENST00000422760 PTPN23Q9H3S7 1636 aa34.07■■■■□ 3.04
LSM8-203ENST00000422760 PRG4Q92954 1404 aaPredicted RBP34.06■■■■□ 3.04
LSM8-203ENST00000422760 DIEXFQ68CQ4 756 aaKnown RBP34.06■■■■□ 3.04
LSM8-203ENST00000422760 RAB3GAP2Q9H2M9 1393 aa34.06■■■■□ 3.04
LSM8-203ENST00000422760 SHROOM2Q13796 1616 aa34.05■■■■□ 3.04
LSM8-203ENST00000422760 ABCA8O94911 1581 aa34.04■■■■□ 3.04
LSM8-203ENST00000422760 SETD5Q9C0A6 1442 aa34.03■■■■□ 3.04
LSM8-203ENST00000422760 ZNF316A6NFI3 1004 aaPredicted RBP33.99■■■■□ 3.03
LSM8-203ENST00000422760 TCOF1Q13428 1488 aaKnown RBP33.97■■■■□ 3.03
LSM8-203ENST00000422760 CDK11AQ9UQ88 783 aaPredicted RBP33.94■■■■□ 3.02
LSM8-203ENST00000422760 MIA2Q96PC5 1412 aa33.92■■■■□ 3.02
LSM8-203ENST00000422760 TROQ12816 1431 aaPredicted RBP33.91■■■■□ 3.02
LSM8-203ENST00000422760 PTPRKQ15262 1439 aa33.91■■■■□ 3.02
LSM8-203ENST00000422760 CLASP1Q7Z460 1538 aa33.88■■■■□ 3.01
LSM8-203ENST00000422760 ADCY10Q96PN6 1610 aa33.88■■■■□ 3.01
LSM8-203ENST00000422760 PTPRGP23470 1445 aa33.87■■■■□ 3.01
LSM8-203ENST00000422760 KIF14Q15058 1648 aa33.83■■■■□ 3.01
LSM8-203ENST00000422760 ERCC6L2Q5T890 1561 aa33.82■■■■□ 3
LSM8-203ENST00000422760 HFM1A2PYH4 1435 aa33.81■■■■□ 3
LSM8-203ENST00000422760 ATP10BO94823 1461 aa33.81■■■■□ 3
LSM8-203ENST00000422760 MAPKBP1O60336 1514 aa33.78■■■■□ 3
LSM8-203ENST00000422760 ITSN2Q9NZM3 1697 aa33.78■■■■□ 3
LSM8-203ENST00000422760 CENPBP07199 599 aaPredicted RBP33.76■■■□□ 2.99
LSM8-203ENST00000422760 NAIPQ13075 1403 aa33.72■■■□□ 2.99
LSM8-203ENST00000422760 ACIN1Q9UKV3 1341 aaKnown RBP33.7■■■□□ 2.99
LSM8-203ENST00000422760 UACAQ9BZF9 1416 aa33.7■■■□□ 2.99
LSM8-203ENST00000422760 GCC2Q8IWJ2 1684 aa33.7■■■□□ 2.99
LSM8-203ENST00000422760 SCAF1Q9H7N4 1312 aaKnown RBP33.68■■■□□ 2.98
LSM8-203ENST00000422760 DNMT1P26358 1616 aaKnown RBP33.68■■■□□ 2.98
LSM8-203ENST00000422760 GPATCH8Q9UKJ3 1502 aaKnown RBP33.67■■■□□ 2.98
LSM8-203ENST00000422760 PLEKHD1A6NEE1 506 aa33.66■■■□□ 2.98
LSM8-203ENST00000422760 AKNAQ7Z591 1439 aa33.65■■■□□ 2.98
LSM8-203ENST00000422760 ABCC2Q92887 1545 aa33.63■■■□□ 2.97
LSM8-203ENST00000422760 CDC42BPAQ5VT25 1732 aa33.62■■■□□ 2.97
LSM8-203ENST00000422760 DAPK1P53355 1430 aa33.61■■■□□ 2.97
LSM8-203ENST00000422760 CAMSAP2Q08AD1 1489 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms