RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 EIF4G3O43432 1585 aaKnown RBP29.31■■■□□ 2.28
RBFOX1-204ENST00000422070 RANGAP1P46060 587 aaPredicted RBP29.31■■■□□ 2.28
RBFOX1-204ENST00000422070 PPARGC1BQ86YN6 1023 aaKnown RBP29.24■■■□□ 2.27
RBFOX1-204ENST00000422070 APLP2Q06481 763 aa29.19■■■□□ 2.26
RBFOX1-204ENST00000422070 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
RBFOX1-204ENST00000422070 SAMD9Q5K651 1589 aa29.17■■■□□ 2.26
RBFOX1-204ENST00000422070 SNAPC4Q5SXM2 1469 aa29.15■■■□□ 2.26
RBFOX1-204ENST00000422070 MAP3K1Q13233 1512 aa29.13■■■□□ 2.25
RBFOX1-204ENST00000422070 IQGAP2Q13576 1575 aa29.07■■■□□ 2.24
RBFOX1-204ENST00000422070 GRIN2AQ12879 1464 aa29.06■■■□□ 2.24
RBFOX1-204ENST00000422070 HRCP23327 699 aa29.05■■■□□ 2.24
RBFOX1-204ENST00000422070 FHOD3Q2V2M9 1422 aa29.03■■■□□ 2.24
RBFOX1-204ENST00000422070 SYNJ2O15056 1496 aa29.03■■■□□ 2.24
RBFOX1-204ENST00000422070 FMN1Q68DA7 1419 aa29.02■■■□□ 2.24
RBFOX1-204ENST00000422070 PCF11O94913 1555 aaKnown RBP29.01■■■□□ 2.23
RBFOX1-204ENST00000422070 FYCO1Q9BQS8 1478 aa29.01■■■□□ 2.23
RBFOX1-204ENST00000422070 TIAM1Q13009 1591 aa28.99■■■□□ 2.23
RBFOX1-204ENST00000422070 KIAA0586Q9BVV6 1533 aa28.98■■■□□ 2.23
RBFOX1-204ENST00000422070 CASKIN1Q8WXD9 1431 aa28.98■■■□□ 2.23
RBFOX1-204ENST00000422070 UGGT2Q9NYU1 1516 aa28.98■■■□□ 2.23
RBFOX1-204ENST00000422070 CFAP43Q8NDM7 1665 aa28.95■■■□□ 2.23
RBFOX1-204ENST00000422070 TTBK1Q5TCY1 1321 aaPredicted RBP28.95■■■□□ 2.22
RBFOX1-204ENST00000422070 P3H3Q8IVL6 736 aa28.89■■■□□ 2.21
RBFOX1-204ENST00000422070 KANK4Q5T7N3 995 aaPredicted RBP28.88■■■□□ 2.21
RBFOX1-204ENST00000422070 NUP160Q12769 1436 aa28.86■■■□□ 2.21
RBFOX1-204ENST00000422070 CEP170Q5SW79 1584 aa28.85■■■□□ 2.21
RBFOX1-204ENST00000422070 LRRC9Q6ZRR7 1453 aa28.84■■■□□ 2.21
RBFOX1-204ENST00000422070 CHMP7Q8WUX9 453 aaPredicted RBP28.83■■■□□ 2.21
RBFOX1-204ENST00000422070 RRBP1Q9P2E9 1410 aaKnown RBP28.78■■■□□ 2.2
RBFOX1-204ENST00000422070 KIAA0556O60303 1618 aa28.78■■■□□ 2.2
RBFOX1-204ENST00000422070 DISP1Q96F81 1524 aa28.76■■■□□ 2.19
RBFOX1-204ENST00000422070 HECW1Q76N89 1606 aa28.7■■■□□ 2.19
RBFOX1-204ENST00000422070 CCDC18Q5T9S5 1454 aa28.69■■■□□ 2.18
RBFOX1-204ENST00000422070 LRRIQ1Q96JM4 1722 aa28.68■■■□□ 2.18
RBFOX1-204ENST00000422070 ZEB1P37275 1124 aaPredicted RBP28.67■■■□□ 2.18
RBFOX1-204ENST00000422070 FBLN2P98095 1184 aa28.63■■■□□ 2.17
RBFOX1-204ENST00000422070 CCNB3Q8WWL7 1395 aa28.61■■■□□ 2.17
RBFOX1-204ENST00000422070 CHD1O14646 1710 aa28.59■■■□□ 2.17
RBFOX1-204ENST00000422070 ATP1B4Q9UN42 357 aaPredicted RBP28.59■■■□□ 2.17
RBFOX1-204ENST00000422070 CARMIL2Q6F5E8 1435 aa28.58■■■□□ 2.17
RBFOX1-204ENST00000422070 EHBP1L1Q8N3D4 1523 aa28.57■■■□□ 2.16
RBFOX1-204ENST00000422070 EPRSP07814 1512 aaKnown RBP28.55■■■□□ 2.16
RBFOX1-204ENST00000422070 PHLDB1Q86UU1 1377 aa28.54■■■□□ 2.16
RBFOX1-204ENST00000422070 JPH4Q96JJ6 628 aa28.54■■■□□ 2.16
RBFOX1-204ENST00000422070 RAPGEF6Q8TEU7 1601 aa28.52■■■□□ 2.16
RBFOX1-204ENST00000422070 MTUS2Q5JR59 1369 aa28.52■■■□□ 2.16
RBFOX1-204ENST00000422070 SUPT6HQ7KZ85 1726 aaKnown RBP28.48■■■□□ 2.15
RBFOX1-204ENST00000422070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.47■■■□□ 2.15
RBFOX1-204ENST00000422070 HNRNPUL2Q1KMD3 747 aaKnown RBP28.47■■■□□ 2.15
RBFOX1-204ENST00000422070 SHROOM2Q13796 1616 aa28.46■■■□□ 2.15
RBFOX1-204ENST00000422070 ARHGEF11O15085 1522 aa28.45■■■□□ 2.15
RBFOX1-204ENST00000422070 NUP153P49790 1475 aaKnown RBP28.44■■■□□ 2.14
RBFOX1-204ENST00000422070 MAGI3Q5TCQ9 1506 aa28.44■■■□□ 2.14
RBFOX1-204ENST00000422070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.43■■■□□ 2.14
RBFOX1-204ENST00000422070 NCOA2Q15596 1464 aa28.41■■■□□ 2.14
RBFOX1-204ENST00000422070 CCER1Q8TC90 406 aaPredicted RBP28.4■■■□□ 2.14
RBFOX1-204ENST00000422070 CDK13Q14004 1512 aaKnown RBP28.4■■■□□ 2.14
RBFOX1-204ENST00000422070 FGD6Q6ZV73 1430 aa28.37■■■□□ 2.13
RBFOX1-204ENST00000422070 ABCA8O94911 1581 aa28.36■■■□□ 2.13
RBFOX1-204ENST00000422070 PRG4Q92954 1404 aaPredicted RBP28.35■■■□□ 2.13
RBFOX1-204ENST00000422070 MYOM3Q5VTT5 1437 aa28.35■■■□□ 2.13
RBFOX1-204ENST00000422070 CLASP1Q7Z460 1538 aa28.34■■■□□ 2.13
RBFOX1-204ENST00000422070 PLB1Q6P1J6 1458 aa28.33■■■□□ 2.13
RBFOX1-204ENST00000422070 CDK11AQ9UQ88 783 aaPredicted RBP28.25■■■□□ 2.11
RBFOX1-204ENST00000422070 PTPRGP23470 1445 aa28.22■■■□□ 2.11
RBFOX1-204ENST00000422070 MIA2Q96PC5 1412 aa28.22■■■□□ 2.11
RBFOX1-204ENST00000422070 TCOF1Q13428 1488 aaKnown RBP28.21■■■□□ 2.11
RBFOX1-204ENST00000422070 TROQ12816 1431 aaPredicted RBP28.2■■■□□ 2.11
RBFOX1-204ENST00000422070 ADCY10Q96PN6 1610 aa28.2■■■□□ 2.1
RBFOX1-204ENST00000422070 PTPN23Q9H3S7 1636 aa28.2■■■□□ 2.1
RBFOX1-204ENST00000422070 FAM50AQ14320 339 aaKnown RBP28.19■■■□□ 2.1
RBFOX1-204ENST00000422070 CLSPNQ9HAW4 1339 aa28.15■■■□□ 2.1
RBFOX1-204ENST00000422070 ATP10BO94823 1461 aa28.13■■■□□ 2.09
RBFOX1-204ENST00000422070 SETD5Q9C0A6 1442 aa28.11■■■□□ 2.09
RBFOX1-204ENST00000422070 ITGAEP38570 1179 aa28.1■■■□□ 2.09
RBFOX1-204ENST00000422070 UACAQ9BZF9 1416 aa28.1■■■□□ 2.09
RBFOX1-204ENST00000422070 ERCC6L2Q5T890 1561 aa28.1■■■□□ 2.09
RBFOX1-204ENST00000422070 ARID3CA6NKF2 412 aa28.1■■■□□ 2.09
RBFOX1-204ENST00000422070 DHX57Q6P158 1386 aaKnown RBP28.09■■■□□ 2.09
RBFOX1-204ENST00000422070 RAB3GAP2Q9H2M9 1393 aa28.07■■■□□ 2.08
RBFOX1-204ENST00000422070 ITSN2Q9NZM3 1697 aa28.06■■■□□ 2.08
RBFOX1-204ENST00000422070 ABCC2Q92887 1545 aa28.05■■■□□ 2.08
RBFOX1-204ENST00000422070 KIF14Q15058 1648 aa28.02■■■□□ 2.08
RBFOX1-204ENST00000422070 HFM1A2PYH4 1435 aa28.01■■■□□ 2.07
RBFOX1-204ENST00000422070 PTPRKQ15262 1439 aa28.01■■■□□ 2.07
RBFOX1-204ENST00000422070 UHRF1BP1LA0JNW5 1464 aa28■■■□□ 2.07
RBFOX1-204ENST00000422070 AKNAQ7Z591 1439 aa27.99■■■□□ 2.07
RBFOX1-204ENST00000422070 PLEKHD1A6NEE1 506 aa27.98■■■□□ 2.07
RBFOX1-204ENST00000422070 ABCC10Q5T3U5 1492 aa27.96■■■□□ 2.07
RBFOX1-204ENST00000422070 GPATCH8Q9UKJ3 1502 aaKnown RBP27.96■■■□□ 2.07
RBFOX1-204ENST00000422070 DNMT1P26358 1616 aaKnown RBP27.92■■■□□ 2.06
RBFOX1-204ENST00000422070 GCC2Q8IWJ2 1684 aa27.89■■■□□ 2.06
RBFOX1-204ENST00000422070 NAIPQ13075 1403 aa27.89■■■□□ 2.06
RBFOX1-204ENST00000422070 CDC42BPAQ5VT25 1732 aa27.88■■■□□ 2.05
RBFOX1-204ENST00000422070 KDM5BQ9UGL1 1544 aa27.87■■■□□ 2.05
RBFOX1-204ENST00000422070 CAMSAP2Q08AD1 1489 aa27.86■■■□□ 2.05
RBFOX1-204ENST00000422070 DAPK1P53355 1430 aa27.86■■■□□ 2.05
RBFOX1-204ENST00000422070 ROCK1Q13464 1354 aa27.84■■■□□ 2.05
RBFOX1-204ENST00000422070 MAPKBP1O60336 1514 aa27.83■■■□□ 2.05
RBFOX1-204ENST00000422070 OSCARQ8IYS5 282 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms