RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 KIF13AQ9H1H9 1805 aa29.77■■■□□ 2.36
UPF3AP3-201ENST00000420996 IGF1RP08069 1367 aa29.7■■■□□ 2.35
UPF3AP3-201ENST00000420996 KIF27Q86VH2 1401 aa29.68■■■□□ 2.34
UPF3AP3-201ENST00000420996 KIAA0586Q9BVV6 1533 aa29.67■■■□□ 2.34
UPF3AP3-201ENST00000420996 NPM1P06748 294 aaKnown RBP eCLIP29.66■■■□□ 2.34
UPF3AP3-201ENST00000420996 CUL7Q14999 1698 aa29.66■■■□□ 2.34
UPF3AP3-201ENST00000420996 ABCC10Q5T3U5 1492 aa29.61■■■□□ 2.33
UPF3AP3-201ENST00000420996 MAPKBP1O60336 1514 aa29.61■■■□□ 2.33
UPF3AP3-201ENST00000420996 ADCY10Q96PN6 1610 aa29.6■■■□□ 2.33
UPF3AP3-201ENST00000420996 FAM69CQ0P6D2 419 aa29.58■■■□□ 2.33
UPF3AP3-201ENST00000420996 DIP2BQ9P265 1576 aa29.52■■■□□ 2.32
UPF3AP3-201ENST00000420996 CARMIL1Q5VZK9 1371 aa29.5■■■□□ 2.31
UPF3AP3-201ENST00000420996 PTPRGP23470 1445 aa29.43■■■□□ 2.3
UPF3AP3-201ENST00000420996 CARMIL2Q6F5E8 1435 aa29.38■■■□□ 2.29
UPF3AP3-201ENST00000420996 TNIKQ9UKE5 1360 aa29.36■■■□□ 2.29
UPF3AP3-201ENST00000420996 IQGAP2Q13576 1575 aa29.35■■■□□ 2.29
UPF3AP3-201ENST00000420996 TSPOAP1O95153 1857 aa29.33■■■□□ 2.29
UPF3AP3-201ENST00000420996 TTBK1Q5TCY1 1321 aaPredicted RBP29.32■■■□□ 2.28
UPF3AP3-201ENST00000420996 KDM6BO15054 1643 aa29.31■■■□□ 2.28
UPF3AP3-201ENST00000420996 ABCC2Q92887 1545 aa29.3■■■□□ 2.28
UPF3AP3-201ENST00000420996 UHRF1BP1LA0JNW5 1464 aa29.23■■■□□ 2.27
UPF3AP3-201ENST00000420996 ASXL2Q76L83 1435 aa29.21■■■□□ 2.27
UPF3AP3-201ENST00000420996 DISP1Q96F81 1524 aa29.21■■■□□ 2.27
UPF3AP3-201ENST00000420996 PLB1Q6P1J6 1458 aa29.21■■■□□ 2.27
UPF3AP3-201ENST00000420996 RAPGEF2Q9Y4G8 1499 aa29.2■■■□□ 2.26
UPF3AP3-201ENST00000420996 UACAQ9BZF9 1416 aa29.2■■■□□ 2.26
UPF3AP3-201ENST00000420996 GLI2P10070 1586 aa29.18■■■□□ 2.26
UPF3AP3-201ENST00000420996 UGGT2Q9NYU1 1516 aa29.16■■■□□ 2.26
UPF3AP3-201ENST00000420996 KDM4FA0A1W2PPD8 638 aa29.11■■■□□ 2.25
UPF3AP3-201ENST00000420996 PPRC1Q5VV67 1664 aaKnown RBP29.11■■■□□ 2.25
UPF3AP3-201ENST00000420996 KDM5BQ9UGL1 1544 aa29.1■■■□□ 2.25
UPF3AP3-201ENST00000420996 KIAA0556O60303 1618 aa29.07■■■□□ 2.24
UPF3AP3-201ENST00000420996 EPRSP07814 1512 aaKnown RBP29.03■■■□□ 2.24
UPF3AP3-201ENST00000420996 ZCCHC11Q5TAX3 1644 aaKnown RBP29.02■■■□□ 2.24
UPF3AP3-201ENST00000420996 MAP3K4Q9Y6R4 1608 aa29■■■□□ 2.23
UPF3AP3-201ENST00000420996 CTTNBP2Q8WZ74 1663 aa28.99■■■□□ 2.23
UPF3AP3-201ENST00000420996 TEX14Q8IWB6 1497 aa28.93■■■□□ 2.22
UPF3AP3-201ENST00000420996 GOLGA3Q08378 1498 aa28.91■■■□□ 2.22
UPF3AP3-201ENST00000420996 COL17A1Q9UMD9 1497 aaPredicted RBP28.91■■■□□ 2.22
UPF3AP3-201ENST00000420996 WDR7Q9Y4E6 1490 aa28.89■■■□□ 2.22
UPF3AP3-201ENST00000420996 PRXQ9BXM0 1461 aa28.85■■■□□ 2.21
UPF3AP3-201ENST00000420996 ABCA8O94911 1581 aa28.84■■■□□ 2.21
UPF3AP3-201ENST00000420996 ADGRL1O94910 1474 aa28.82■■■□□ 2.2
UPF3AP3-201ENST00000420996 CFAP43Q8NDM7 1665 aa28.76■■■□□ 2.19
UPF3AP3-201ENST00000420996 CD109Q6YHK3 1445 aa28.75■■■□□ 2.19
UPF3AP3-201ENST00000420996 KCNH8Q96L42 1107 aa28.74■■■□□ 2.19
UPF3AP3-201ENST00000420996 MAGI3Q5TCQ9 1506 aa28.74■■■□□ 2.19
UPF3AP3-201ENST00000420996 FAM9AQ8IZU1 332 aaPredicted RBP28.68■■■□□ 2.18
UPF3AP3-201ENST00000420996 P3H3Q8IVL6 736 aa28.61■■■□□ 2.17
UPF3AP3-201ENST00000420996 ATP10BO94823 1461 aa28.6■■■□□ 2.17
UPF3AP3-201ENST00000420996 CSRNP3Q8WYN3 585 aa28.59■■■□□ 2.17
UPF3AP3-201ENST00000420996 ARID3CA6NKF2 412 aa28.56■■■□□ 2.16
UPF3AP3-201ENST00000420996 SAMD9Q5K651 1589 aa28.54■■■□□ 2.16
UPF3AP3-201ENST00000420996 ARAP3Q8WWN8 1544 aa28.53■■■□□ 2.16
UPF3AP3-201ENST00000420996 ABCA9Q8IUA7 1624 aa28.5■■■□□ 2.15
UPF3AP3-201ENST00000420996 RAPGEF6Q8TEU7 1601 aa28.49■■■□□ 2.15
UPF3AP3-201ENST00000420996 HECW2Q9P2P5 1572 aa28.49■■■□□ 2.15
UPF3AP3-201ENST00000420996 PHLDB1Q86UU1 1377 aa28.47■■■□□ 2.15
UPF3AP3-201ENST00000420996 KIF21BO75037 1637 aa28.45■■■□□ 2.14
UPF3AP3-201ENST00000420996 EEA1Q15075 1411 aa28.43■■■□□ 2.14
UPF3AP3-201ENST00000420996 ILDR1Q86SU0 546 aaPredicted RBP28.41■■■□□ 2.14
UPF3AP3-201ENST00000420996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.39■■■□□ 2.14
UPF3AP3-201ENST00000420996 HNRNPUL2Q1KMD3 747 aaKnown RBP28.39■■■□□ 2.14
UPF3AP3-201ENST00000420996 NUP153P49790 1475 aaKnown RBP28.37■■■□□ 2.13
UPF3AP3-201ENST00000420996 NEO1Q92859 1461 aa28.37■■■□□ 2.13
UPF3AP3-201ENST00000420996 RAPGEF3O95398 923 aa28.33■■■□□ 2.13
UPF3AP3-201ENST00000420996 RANGAP1P46060 587 aaPredicted RBP28.33■■■□□ 2.13
UPF3AP3-201ENST00000420996 FHOD3Q2V2M9 1422 aa28.33■■■□□ 2.13
UPF3AP3-201ENST00000420996 ADAMTSL3P82987 1691 aa28.26■■■□□ 2.12
UPF3AP3-201ENST00000420996 PLEKHD1A6NEE1 506 aa28.26■■■□□ 2.11
UPF3AP3-201ENST00000420996 FRMPD1Q5SYB0 1578 aa28.25■■■□□ 2.11
UPF3AP3-201ENST00000420996 EFCAB5A4FU69 1503 aa28.23■■■□□ 2.11
UPF3AP3-201ENST00000420996 PTPRMP28827 1452 aa28.21■■■□□ 2.11
UPF3AP3-201ENST00000420996 BCORL1Q5H9F3 1711 aa28.18■■■□□ 2.1
UPF3AP3-201ENST00000420996 DENND4BO75064 1496 aaPredicted RBP28.16■■■□□ 2.1
UPF3AP3-201ENST00000420996 AKNAQ7Z591 1439 aa28.16■■■□□ 2.1
UPF3AP3-201ENST00000420996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.15■■■□□ 2.1
UPF3AP3-201ENST00000420996 CFAP74Q9C0B2 1584 aa28.15■■■□□ 2.1
UPF3AP3-201ENST00000420996 ARID4BQ4LE39 1312 aaPredicted RBP28.15■■■□□ 2.1
UPF3AP3-201ENST00000420996 RICTORQ6R327 1708 aa28.15■■■□□ 2.1
UPF3AP3-201ENST00000420996 FANCAO15360 1455 aa28.14■■■□□ 2.09
UPF3AP3-201ENST00000420996 ARHGEF40Q8TER5 1519 aa28.12■■■□□ 2.09
UPF3AP3-201ENST00000420996 TTC37Q6PGP7 1564 aa28.1■■■□□ 2.09
UPF3AP3-201ENST00000420996 MADDQ8WXG6 1647 aa28.1■■■□□ 2.09
UPF3AP3-201ENST00000420996 CDK13Q14004 1512 aaKnown RBP28.06■■■□□ 2.08
UPF3AP3-201ENST00000420996 ZMYM4Q5VZL5 1548 aa28.04■■■□□ 2.08
UPF3AP3-201ENST00000420996 UBTFP17480 764 aaKnown RBP28.01■■■□□ 2.07
UPF3AP3-201ENST00000420996 RIMS1Q86UR5 1692 aaKnown RBP28■■■□□ 2.07
UPF3AP3-201ENST00000420996 MAGI2Q86UL8 1455 aa27.99■■■□□ 2.07
UPF3AP3-201ENST00000420996 PLCH2O75038 1416 aa27.99■■■□□ 2.07
UPF3AP3-201ENST00000420996 FMN1Q68DA7 1419 aa27.99■■■□□ 2.07
UPF3AP3-201ENST00000420996 PCF11O94913 1555 aaKnown RBP27.99■■■□□ 2.07
UPF3AP3-201ENST00000420996 ZFYVE16Q7Z3T8 1539 aa27.98■■■□□ 2.07
UPF3AP3-201ENST00000420996 POGZQ7Z3K3 1410 aa27.98■■■□□ 2.07
UPF3AP3-201ENST00000420996 YEATS2Q9ULM3 1422 aa27.96■■■□□ 2.07
UPF3AP3-201ENST00000420996 HECW1Q76N89 1606 aa27.96■■■□□ 2.07
UPF3AP3-201ENST00000420996 LMTK3Q96Q04 1460 aa27.95■■■□□ 2.07
UPF3AP3-201ENST00000420996 EHMT2Q96KQ7 1210 aa27.95■■■□□ 2.06
UPF3AP3-201ENST00000420996 ATP1B4Q9UN42 357 aaPredicted RBP27.95■■■□□ 2.06
UPF3AP3-201ENST00000420996 SCAPERQ9BY12 1400 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms