RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 CCNB3Q8WWL7 1395 aa22.32■■□□□ 1.16
CRTC3-202ENST00000420329 ANP32EQ9BTT0 268 aa22.28■■□□□ 1.16
CRTC3-202ENST00000420329 NBR1Q14596 966 aa22.27■■□□□ 1.16
CRTC3-202ENST00000420329 ZBTB47Q9UFB7 747 aaPredicted RBP22.24■■□□□ 1.15
CRTC3-202ENST00000420329 KDM2AQ9Y2K7 1162 aa22.22■■□□□ 1.15
CRTC3-202ENST00000420329 WIZO95785 1651 aa22.22■■□□□ 1.15
CRTC3-202ENST00000420329 KANK4Q5T7N3 995 aaPredicted RBP22.2■■□□□ 1.14
CRTC3-202ENST00000420329 TSPY4P0CV99 314 aa22.15■■□□□ 1.14
CRTC3-202ENST00000420329 TSPY10P0CW01 314 aa22.15■■□□□ 1.14
CRTC3-202ENST00000420329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.13■■□□□ 1.13
CRTC3-202ENST00000420329 BCL11AQ9H165 835 aa22.11■■□□□ 1.13
CRTC3-202ENST00000420329 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
CRTC3-202ENST00000420329 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.13
CRTC3-202ENST00000420329 TIMELESSQ9UNS1 1208 aa22.08■■□□□ 1.13
CRTC3-202ENST00000420329 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.13
CRTC3-202ENST00000420329 SETD5Q9C0A6 1442 aa22.07■■□□□ 1.12
CRTC3-202ENST00000420329 CARMIL1Q5VZK9 1371 aa22.05■■□□□ 1.12
CRTC3-202ENST00000420329 NEFMP07197 916 aa22.05■■□□□ 1.12
CRTC3-202ENST00000420329 CUX2O14529 1486 aa22.04■■□□□ 1.12
CRTC3-202ENST00000420329 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.12
CRTC3-202ENST00000420329 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
CRTC3-202ENST00000420329 PPP4R2Q9NY27 417 aa22.03■■□□□ 1.12
CRTC3-202ENST00000420329 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.02■■□□□ 1.12
CRTC3-202ENST00000420329 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
CRTC3-202ENST00000420329 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
CRTC3-202ENST00000420329 UPF2Q9HAU5 1272 aaKnown RBP21.98■■□□□ 1.11
CRTC3-202ENST00000420329 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
CRTC3-202ENST00000420329 CHMP7Q8WUX9 453 aaPredicted RBP21.97■■□□□ 1.11
CRTC3-202ENST00000420329 EIF5BO60841 1220 aaKnown RBP21.94■■□□□ 1.1
CRTC3-202ENST00000420329 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
CRTC3-202ENST00000420329 RAPGEF2Q9Y4G8 1499 aa21.93■■□□□ 1.1
CRTC3-202ENST00000420329 B4GALNT3Q6L9W6 998 aa21.93■■□□□ 1.1
CRTC3-202ENST00000420329 RBM19Q9Y4C8 960 aaKnown RBP21.93■■□□□ 1.1
CRTC3-202ENST00000420329 CARD11Q9BXL7 1154 aa21.91■■□□□ 1.1
CRTC3-202ENST00000420329 RGL3Q3MIN7 710 aa21.91■■□□□ 1.1
CRTC3-202ENST00000420329 TSHZ2Q9NRE2 1034 aa21.89■■□□□ 1.1
CRTC3-202ENST00000420329 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.1
CRTC3-202ENST00000420329 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.09
CRTC3-202ENST00000420329 PLEKHD1A6NEE1 506 aa21.88■■□□□ 1.09
CRTC3-202ENST00000420329 HSPA5P11021 654 aaKnown RBP21.86■■□□□ 1.09
CRTC3-202ENST00000420329 HSP90AA1P07900 732 aaKnown RBP21.84■■□□□ 1.09
CRTC3-202ENST00000420329 PPP1R15AO75807 674 aaPredicted RBP21.84■■□□□ 1.09
CRTC3-202ENST00000420329 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
CRTC3-202ENST00000420329 SLC24A1O60721 1099 aa21.82■■□□□ 1.08
CRTC3-202ENST00000420329 DDRGK1Q96HY6 314 aa21.8■■□□□ 1.08
CRTC3-202ENST00000420329 NOP58Q9Y2X3 529 aaKnown RBP21.8■■□□□ 1.08
CRTC3-202ENST00000420329 SMARCA4P51532 1647 aa21.78■■□□□ 1.08
CRTC3-202ENST00000420329 KCNH8Q96L42 1107 aa21.78■■□□□ 1.08
CRTC3-202ENST00000420329 ARXQ96QS3 562 aa21.75■■□□□ 1.07
CRTC3-202ENST00000420329 FOXD1Q16676 465 aa21.74■■□□□ 1.07
CRTC3-202ENST00000420329 KNSTRNQ9Y448 316 aa21.72■■□□□ 1.07
CRTC3-202ENST00000420329 ANP32BQ92688 251 aaKnown RBP21.72■■□□□ 1.07
CRTC3-202ENST00000420329 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
CRTC3-202ENST00000420329 LAS1LQ9Y4W2 734 aaKnown RBP21.69■■□□□ 1.06
CRTC3-202ENST00000420329 STAG3Q9UJ98 1225 aa21.68■■□□□ 1.06
CRTC3-202ENST00000420329 ERICH6BQ5W0A0 696 aa21.67■■□□□ 1.06
CRTC3-202ENST00000420329 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
CRTC3-202ENST00000420329 PPM1GO15355 546 aaPredicted RBP21.67■■□□□ 1.06
CRTC3-202ENST00000420329 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
CRTC3-202ENST00000420329 MPHOSPH9Q99550 1183 aa21.66■■□□□ 1.06
CRTC3-202ENST00000420329 DCAF11Q8TEB1 546 aa21.65■■□□□ 1.06
CRTC3-202ENST00000420329 CC2D1BQ5T0F9 858 aaKnown RBP21.65■■□□□ 1.06
CRTC3-202ENST00000420329 CDCA8Q53HL2 280 aa21.65■■□□□ 1.06
CRTC3-202ENST00000420329 FHOD3Q2V2M9 1422 aa21.64■■□□□ 1.05
CRTC3-202ENST00000420329 BECN1Q14457 450 aa21.63■■□□□ 1.05
CRTC3-202ENST00000420329 NPM1P06748 294 aaKnown RBP eCLIP21.62■■□□□ 1.05
CRTC3-202ENST00000420329 RGS3P49796 1198 aa21.59■■□□□ 1.05
CRTC3-202ENST00000420329 L3MBTL2Q969R5 705 aa21.59■■□□□ 1.05
CRTC3-202ENST00000420329 PKD2Q13563 968 aa21.58■■□□□ 1.05
CRTC3-202ENST00000420329 TDRD9Q8NDG6 1382 aaKnown RBP21.57■■□□□ 1.04
CRTC3-202ENST00000420329 DEKP35659 375 aaKnown RBP21.56■■□□□ 1.04
CRTC3-202ENST00000420329 NEUROD2Q15784 382 aa21.54■■□□□ 1.04
CRTC3-202ENST00000420329 ESF1Q9H501 851 aaKnown RBP21.52■■□□□ 1.04
CRTC3-202ENST00000420329 TMF1P82094 1093 aa21.51■■□□□ 1.03
CRTC3-202ENST00000420329 SENP3Q9H4L4 574 aaPredicted RBP21.51■■□□□ 1.03
CRTC3-202ENST00000420329 CFAP53Q96M91 514 aa21.51■■□□□ 1.03
CRTC3-202ENST00000420329 KIF21BO75037 1637 aa21.5■■□□□ 1.03
CRTC3-202ENST00000420329 RTN4Q9NQC3 1192 aaKnown RBP21.5■■□□□ 1.03
CRTC3-202ENST00000420329 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
CRTC3-202ENST00000420329 MYH16Q9H6N6 1097 aa21.47■■□□□ 1.03
CRTC3-202ENST00000420329 FRAT1Q92837 279 aaPredicted RBP21.46■■□□□ 1.03
CRTC3-202ENST00000420329 NUDCQ9Y266 331 aa21.46■■□□□ 1.03
CRTC3-202ENST00000420329 RCAN3Q9UKA8 241 aa21.45■■□□□ 1.03
CRTC3-202ENST00000420329 KTN1Q86UP2 1357 aaKnown RBP21.44■■□□□ 1.02
CRTC3-202ENST00000420329 FTSJ3Q8IY81 847 aaKnown RBP21.44■■□□□ 1.02
CRTC3-202ENST00000420329 GLIPR1L2Q4G1C9 344 aa21.43■■□□□ 1.02
CRTC3-202ENST00000420329 TNNT2P45379 298 aaPredicted RBP21.42■■□□□ 1.02
CRTC3-202ENST00000420329 RALBP1Q15311 655 aa21.41■■□□□ 1.02
CRTC3-202ENST00000420329 NUP155O75694 1391 aa21.41■■□□□ 1.02
CRTC3-202ENST00000420329 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.02
CRTC3-202ENST00000420329 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.01
CRTC3-202ENST00000420329 ROCK2O75116 1388 aaKnown RBP21.37■■□□□ 1.01
CRTC3-202ENST00000420329 TCERG1O14776 1098 aaKnown RBP21.37■■□□□ 1.01
CRTC3-202ENST00000420329 ANKRD30AQ9BXX3 1397 aa21.36■■□□□ 1.01
CRTC3-202ENST00000420329 IGF1RP08069 1367 aa21.36■■□□□ 1.01
CRTC3-202ENST00000420329 TRIM44Q96DX7 344 aaPredicted RBP21.34■■□□□ 1.01
CRTC3-202ENST00000420329 PHLDB1Q86UU1 1377 aa21.34■■□□□ 1.01
CRTC3-202ENST00000420329 IPO9Q96P70 1041 aaKnown RBP21.33■■□□□ 1.01
CRTC3-202ENST00000420329 PDS5BQ9NTI5 1447 aa21.32■■□□□ 1
CRTC3-202ENST00000420329 MAPK8IP3Q9UPT6 1336 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms