RNA–Protein interactions for RNA: ENST00000419905.5

LINC01393-201, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 2 BASIC

Gene LINC01393, Length 746 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-201ENST00000419905 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
LINC01393-201ENST00000419905 SLC39A7Q92504 469 aa13.15□□□□□ -0.3
LINC01393-201ENST00000419905 ASTLQ6HA08 431 aaPredicted RBP13.13□□□□□ -0.31
LINC01393-201ENST00000419905 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
LINC01393-201ENST00000419905 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
LINC01393-201ENST00000419905 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
LINC01393-201ENST00000419905 ABCC9O60706 1549 aa13.06□□□□□ -0.32
LINC01393-201ENST00000419905 NPM1P06748 294 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC01393-201ENST00000419905 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
LINC01393-201ENST00000419905 CDAN1Q8IWY9 1227 aa12.96□□□□□ -0.33
LINC01393-201ENST00000419905 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
LINC01393-201ENST00000419905 ATN1P54259 1190 aaPredicted RBP12.88□□□□□ -0.35
LINC01393-201ENST00000419905 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
LINC01393-201ENST00000419905 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
LINC01393-201ENST00000419905 MMRN1Q13201 1228 aa12.74□□□□□ -0.37
LINC01393-201ENST00000419905 BMP2KQ9NSY1 1161 aaPredicted RBP12.74□□□□□ -0.37
LINC01393-201ENST00000419905 NACADO15069 1562 aa12.72□□□□□ -0.37
LINC01393-201ENST00000419905 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
LINC01393-201ENST00000419905 RB1CC1Q8TDY2 1594 aa12.71□□□□□ -0.37
LINC01393-201ENST00000419905 ZCCHC6Q5VYS8 1495 aaKnown RBP12.71□□□□□ -0.38
LINC01393-201ENST00000419905 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
LINC01393-201ENST00000419905 MYO15BQ96JP2 1530 aa12.7□□□□□ -0.38
LINC01393-201ENST00000419905 KIF12Q96FN5 646 aa12.69□□□□□ -0.38
LINC01393-201ENST00000419905 SEC24BO95487 1268 aa12.68□□□□□ -0.38
LINC01393-201ENST00000419905 ST18O60284 1047 aa12.67□□□□□ -0.38
LINC01393-201ENST00000419905 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
LINC01393-201ENST00000419905 DCAF8L2P0C7V8 631 aa12.66□□□□□ -0.38
LINC01393-201ENST00000419905 TIE1P35590 1138 aa12.66□□□□□ -0.38
LINC01393-201ENST00000419905 SPNS2Q8IVW8 549 aa12.66□□□□□ -0.38
LINC01393-201ENST00000419905 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
LINC01393-201ENST00000419905 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
LINC01393-201ENST00000419905 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.38
LINC01393-201ENST00000419905 TRPC6Q9Y210 931 aa12.63□□□□□ -0.39
LINC01393-201ENST00000419905 SLAIN1Q8ND83 568 aa12.59□□□□□ -0.39
LINC01393-201ENST00000419905 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
LINC01393-201ENST00000419905 MAP3K13O43283 966 aa12.55□□□□□ -0.4
LINC01393-201ENST00000419905 IER5LQ5T953 404 aa12.55□□□□□ -0.4
LINC01393-201ENST00000419905 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
LINC01393-201ENST00000419905 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
LINC01393-201ENST00000419905 SNPHO15079 494 aa12.39□□□□□ -0.43
LINC01393-201ENST00000419905 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
LINC01393-201ENST00000419905 PLCG2P16885 1265 aa12.36□□□□□ -0.43
LINC01393-201ENST00000419905 RASEFQ8IZ41 740 aa12.36□□□□□ -0.43
LINC01393-201ENST00000419905 MARVELD3Q96A59 401 aa12.36□□□□□ -0.43
LINC01393-201ENST00000419905 SHROOM4Q9ULL8 1493 aa12.33□□□□□ -0.44
LINC01393-201ENST00000419905 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
LINC01393-201ENST00000419905 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
LINC01393-201ENST00000419905 SCRIBQ14160 1630 aa12.28□□□□□ -0.44
LINC01393-201ENST00000419905 IRX5P78411 483 aaPredicted RBP12.27□□□□□ -0.45
LINC01393-201ENST00000419905 TMEM106CQ9BVX2 250 aa12.25□□□□□ -0.45
LINC01393-201ENST00000419905 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.25□□□□□ -0.45
LINC01393-201ENST00000419905 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
LINC01393-201ENST00000419905 PROM2Q8N271 834 aa12.22□□□□□ -0.45
LINC01393-201ENST00000419905 EMP3P54852 163 aa12.21□□□□□ -0.45
LINC01393-201ENST00000419905 KRTAP3-3Q9BYR6 98 aa12.21□□□□□ -0.45
LINC01393-201ENST00000419905 KRTAP3-2Q9BYR7 98 aa12.21□□□□□ -0.45
LINC01393-201ENST00000419905 OCEL1Q9H607 264 aa12.21□□□□□ -0.45
LINC01393-201ENST00000419905 MIER1Q8N108 512 aa12.2□□□□□ -0.46
LINC01393-201ENST00000419905 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
LINC01393-201ENST00000419905 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
LINC01393-201ENST00000419905 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
LINC01393-201ENST00000419905 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
LINC01393-201ENST00000419905 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
LINC01393-201ENST00000419905 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
LINC01393-201ENST00000419905 NUBP1P53384 320 aa12.04□□□□□ -0.48
LINC01393-201ENST00000419905 C3orf67Q6ZVT6 689 aa12.03□□□□□ -0.48
LINC01393-201ENST00000419905 ZBTB47Q9UFB7 747 aaPredicted RBP12□□□□□ -0.49
LINC01393-201ENST00000419905 FAM212AQ96EL1 285 aa11.99□□□□□ -0.49
LINC01393-201ENST00000419905 PLCD3Q8N3E9 789 aa11.98□□□□□ -0.49
LINC01393-201ENST00000419905 RNF166Q96A37 237 aaPredicted RBP11.97□□□□□ -0.49
LINC01393-201ENST00000419905 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
LINC01393-201ENST00000419905 PDCD7Q8N8D1 485 aaKnown RBP11.94□□□□□ -0.5
LINC01393-201ENST00000419905 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
LINC01393-201ENST00000419905 BAZ1AQ9NRL2 1556 aaPredicted RBP11.85□□□□□ -0.51
LINC01393-201ENST00000419905 MYT1LQ9UL68 1186 aa11.85□□□□□ -0.51
LINC01393-201ENST00000419905 PCDHB8Q9UN66 801 aa11.83□□□□□ -0.52
LINC01393-201ENST00000419905 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
LINC01393-201ENST00000419905 PYGBP11216 843 aa11.81□□□□□ -0.52
LINC01393-201ENST00000419905 HOXB1P14653 301 aaPredicted RBP11.81□□□□□ -0.52
LINC01393-201ENST00000419905 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
LINC01393-201ENST00000419905 ERBB3P21860 1342 aa11.81□□□□□ -0.52
LINC01393-201ENST00000419905 GOLGA2Q08379 1002 aa11.8□□□□□ -0.52
LINC01393-201ENST00000419905 HOXB3P14651 431 aaPredicted RBP11.79□□□□□ -0.52
LINC01393-201ENST00000419905 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
LINC01393-201ENST00000419905 SMARCA2P51531 1590 aa11.77□□□□□ -0.53
LINC01393-201ENST00000419905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC01393-201ENST00000419905 SMARCA4P51532 1647 aa11.77□□□□□ -0.53
LINC01393-201ENST00000419905 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
LINC01393-201ENST00000419905 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
LINC01393-201ENST00000419905 PTGER2P43116 358 aa11.71□□□□□ -0.53
LINC01393-201ENST00000419905 DOK7Q18PE1 504 aa11.7□□□□□ -0.54
LINC01393-201ENST00000419905 VARS2Q5ST30 1063 aaKnown RBP11.69□□□□□ -0.54
LINC01393-201ENST00000419905 HMGXB3Q12766 1538 aa11.69□□□□□ -0.54
LINC01393-201ENST00000419905 NCAPD3P42695 1498 aa11.69□□□□□ -0.54
LINC01393-201ENST00000419905 ATAD2BQ9ULI0 1458 aa11.69□□□□□ -0.54
LINC01393-201ENST00000419905 ILDR1Q86SU0 546 aaPredicted RBP11.68□□□□□ -0.54
LINC01393-201ENST00000419905 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
LINC01393-201ENST00000419905 ZNF467Q7Z7K2 595 aaPredicted RBP11.67□□□□□ -0.54
LINC01393-201ENST00000419905 BAZ1BQ9UIG0 1483 aaKnown RBP11.67□□□□□ -0.54
LINC01393-201ENST00000419905 G3V3G9 751 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms