RNA–Protein interactions for RNA: ENST00000419450.1

LINC01788-201, Transcript of long intergenic non-protein coding RNA 1788, humanhuman

TSL 1 (best) BASIC

Gene LINC01788, Length 2,086 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01788-201ENST00000419450 CHMP4AQ9BY43 222 aa10.85□□□□□ -0.67
LINC01788-201ENST00000419450 CEP162Q5TB80 1403 aa10.83□□□□□ -0.68
LINC01788-201ENST00000419450 C14orf37Q86TY3 774 aa10.81□□□□□ -0.68
LINC01788-201ENST00000419450 DHX37Q8IY37 1157 aaKnown RBP10.8□□□□□ -0.68
LINC01788-201ENST00000419450 MYCNP04198 464 aaPredicted RBP10.78□□□□□ -0.68
LINC01788-201ENST00000419450 AAMPQ13685 434 aa10.78□□□□□ -0.68
LINC01788-201ENST00000419450 A0A0U1RQG5 324 aaPredicted RBP10.77□□□□□ -0.69
LINC01788-201ENST00000419450 TNIKQ9UKE5 1360 aa10.77□□□□□ -0.69
LINC01788-201ENST00000419450 DCAF8L2P0C7V8 631 aa10.77□□□□□ -0.69
LINC01788-201ENST00000419450 HAP1P54257 671 aaPredicted RBP10.77□□□□□ -0.69
LINC01788-201ENST00000419450 BRD2P25440 801 aaKnown RBP10.76□□□□□ -0.69
LINC01788-201ENST00000419450 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
LINC01788-201ENST00000419450 CDK11AQ9UQ88 783 aaPredicted RBP10.76□□□□□ -0.69
LINC01788-201ENST00000419450 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
LINC01788-201ENST00000419450 TPRNQ4KMQ1 711 aa10.72□□□□□ -0.69
LINC01788-201ENST00000419450 EIF4G1Q04637 1599 aaKnown RBP10.7□□□□□ -0.7
LINC01788-201ENST00000419450 HOXD11P31277 338 aaPredicted RBP10.7□□□□□ -0.7
LINC01788-201ENST00000419450 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
LINC01788-201ENST00000419450 ITGAEP38570 1179 aa10.69□□□□□ -0.7
LINC01788-201ENST00000419450 RBM10P98175 930 aaKnown RBP10.68□□□□□ -0.7
LINC01788-201ENST00000419450 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
LINC01788-201ENST00000419450 EEA1Q15075 1411 aa10.67□□□□□ -0.7
LINC01788-201ENST00000419450 PLCB2Q00722 1185 aa10.67□□□□□ -0.7
LINC01788-201ENST00000419450 RSPH6AQ9H0K4 717 aa10.67□□□□□ -0.7
LINC01788-201ENST00000419450 NOP58Q9Y2X3 529 aaKnown RBP10.67□□□□□ -0.7
LINC01788-201ENST00000419450 DHX57Q6P158 1386 aaKnown RBP10.65□□□□□ -0.7
LINC01788-201ENST00000419450 RTL5Q5HYW3 569 aaPredicted RBP10.65□□□□□ -0.7
LINC01788-201ENST00000419450 FBXO3Q9UK99 471 aa10.65□□□□□ -0.7
LINC01788-201ENST00000419450 ZMYND15Q9H091 742 aa10.64□□□□□ -0.71
LINC01788-201ENST00000419450 RSPH4AQ5TD94 716 aa10.63□□□□□ -0.71
LINC01788-201ENST00000419450 CCER2I3L3R5 266 aa10.62□□□□□ -0.71
LINC01788-201ENST00000419450 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
LINC01788-201ENST00000419450 KCNH8Q96L42 1107 aa10.62□□□□□ -0.71
LINC01788-201ENST00000419450 GLIPR1L2Q4G1C9 344 aa10.61□□□□□ -0.71
LINC01788-201ENST00000419450 GOLGA3Q08378 1498 aa10.61□□□□□ -0.71
LINC01788-201ENST00000419450 NACADO15069 1562 aa10.61□□□□□ -0.71
LINC01788-201ENST00000419450 NBR1Q14596 966 aa10.59□□□□□ -0.71
LINC01788-201ENST00000419450 IL27Q8NEV9 243 aa10.59□□□□□ -0.71
LINC01788-201ENST00000419450 DMRT2Q9Y5R5 561 aa10.58□□□□□ -0.72
LINC01788-201ENST00000419450 C11orf95C9JLR9 678 aaPredicted RBP10.56□□□□□ -0.72
LINC01788-201ENST00000419450 VPS8Q8N3P4 1428 aa10.55□□□□□ -0.72
LINC01788-201ENST00000419450 PPP4R2Q9NY27 417 aa10.55□□□□□ -0.72
LINC01788-201ENST00000419450 ABCC8Q09428 1581 aa10.54□□□□□ -0.72
LINC01788-201ENST00000419450 ZNF326Q5BKZ1 582 aaKnown RBP10.54□□□□□ -0.72
LINC01788-201ENST00000419450 CUX2O14529 1486 aa10.54□□□□□ -0.72
LINC01788-201ENST00000419450 BAZ1AQ9NRL2 1556 aaPredicted RBP10.54□□□□□ -0.72
LINC01788-201ENST00000419450 USP35Q9P2H5 1018 aa10.53□□□□□ -0.72
LINC01788-201ENST00000419450 ATF5Q9Y2D1 282 aaPredicted RBP10.53□□□□□ -0.72
LINC01788-201ENST00000419450 WASHC2AQ641Q2 1341 aa10.52□□□□□ -0.72
LINC01788-201ENST00000419450 KIF21BO75037 1637 aa10.51□□□□□ -0.73
LINC01788-201ENST00000419450 TRIM52Q96A61 297 aa10.51□□□□□ -0.73
LINC01788-201ENST00000419450 NAP1L5Q96NT1 182 aaPredicted RBP10.51□□□□□ -0.73
LINC01788-201ENST00000419450 CCDC88BA6NC98 1476 aa10.51□□□□□ -0.73
LINC01788-201ENST00000419450 ANP32AP39687 249 aaKnown RBP10.51□□□□□ -0.73
LINC01788-201ENST00000419450 SCRIBQ14160 1630 aa10.51□□□□□ -0.73
LINC01788-201ENST00000419450 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
LINC01788-201ENST00000419450 CDK11BP21127 795 aaKnown RBP10.5□□□□□ -0.73
LINC01788-201ENST00000419450 ANP32CO43423 234 aa10.49□□□□□ -0.73
LINC01788-201ENST00000419450 UBTFP17480 764 aaKnown RBP10.49□□□□□ -0.73
LINC01788-201ENST00000419450 IPO9Q96P70 1041 aaKnown RBP10.49□□□□□ -0.73
LINC01788-201ENST00000419450 CLIP1P30622 1438 aa10.49□□□□□ -0.73
LINC01788-201ENST00000419450 WASHC2CQ9Y4E1 1318 aa10.49□□□□□ -0.73
LINC01788-201ENST00000419450 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
LINC01788-201ENST00000419450 CEP164Q9UPV0 1460 aa10.48□□□□□ -0.73
LINC01788-201ENST00000419450 PPP1R15AO75807 674 aaPredicted RBP10.48□□□□□ -0.73
LINC01788-201ENST00000419450 ZBTB47Q9UFB7 747 aaPredicted RBP10.47□□□□□ -0.73
LINC01788-201ENST00000419450 SOGA1O94964 1423 aa10.47□□□□□ -0.73
LINC01788-201ENST00000419450 WIZO95785 1651 aa10.47□□□□□ -0.73
LINC01788-201ENST00000419450 DDX10Q13206 875 aaKnown RBP10.46□□□□□ -0.74
LINC01788-201ENST00000419450 BAZ1BQ9UIG0 1483 aaKnown RBP10.45□□□□□ -0.74
LINC01788-201ENST00000419450 MROH2BQ7Z745 1585 aa10.44□□□□□ -0.74
LINC01788-201ENST00000419450 HSP90B1P14625 803 aaKnown RBP10.44□□□□□ -0.74
LINC01788-201ENST00000419450 RRBP1Q9P2E9 1410 aaKnown RBP10.42□□□□□ -0.74
LINC01788-201ENST00000419450 SMARCA2P51531 1590 aa10.42□□□□□ -0.74
LINC01788-201ENST00000419450 BCCIPQ9P287 314 aaKnown RBP eCLIP10.42□□□□□ -0.74
LINC01788-201ENST00000419450 WDR97A6NE52 1622 aa10.41□□□□□ -0.74
LINC01788-201ENST00000419450 MAPKBP1O60336 1514 aa10.41□□□□□ -0.74
LINC01788-201ENST00000419450 IRX6P78412 446 aaPredicted RBP10.41□□□□□ -0.74
LINC01788-201ENST00000419450 TMEM132AQ24JP5 1023 aa10.41□□□□□ -0.74
LINC01788-201ENST00000419450 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.4□□□□□ -0.74
LINC01788-201ENST00000419450 DNAJC5Q9H3Z4 198 aa10.4□□□□□ -0.74
LINC01788-201ENST00000419450 NAP1L2Q9ULW6 460 aaPredicted RBP10.4□□□□□ -0.75
LINC01788-201ENST00000419450 PPM1GO15355 546 aaPredicted RBP10.38□□□□□ -0.75
LINC01788-201ENST00000419450 POTEHQ6S545 545 aa10.38□□□□□ -0.75
LINC01788-201ENST00000419450 HNRNPUQ00839 825 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC01788-201ENST00000419450 RUSC2Q8N2Y8 1516 aa10.36□□□□□ -0.75
LINC01788-201ENST00000419450 NEFMP07197 916 aa10.36□□□□□ -0.75
LINC01788-201ENST00000419450 NCAPD3P42695 1498 aa10.35□□□□□ -0.75
LINC01788-201ENST00000419450 CECR2Q9BXF3 1484 aa10.35□□□□□ -0.75
LINC01788-201ENST00000419450 PEG3Q9GZU2 1588 aa10.35□□□□□ -0.75
LINC01788-201ENST00000419450 B4GALNT3Q6L9W6 998 aa10.35□□□□□ -0.75
LINC01788-201ENST00000419450 FAM43AQ8N2R8 423 aa10.35□□□□□ -0.75
LINC01788-201ENST00000419450 TOP2AP11388 1531 aaKnown RBP10.34□□□□□ -0.75
LINC01788-201ENST00000419450 GSE1Q14687 1217 aa10.32□□□□□ -0.76
LINC01788-201ENST00000419450 BRPF3Q9ULD4 1205 aa10.32□□□□□ -0.76
LINC01788-201ENST00000419450 CCNB3Q8WWL7 1395 aa10.3□□□□□ -0.76
LINC01788-201ENST00000419450 IGSF3O75054 1194 aa10.29□□□□□ -0.76
LINC01788-201ENST00000419450 RAB3GAP2Q9H2M9 1393 aa10.29□□□□□ -0.76
LINC01788-201ENST00000419450 SYNJ1O43426 1573 aa10.29□□□□□ -0.76
LINC01788-201ENST00000419450 IPO4Q8TEX9 1081 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms