RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 MAPKBP1O60336 1514 aa14.3□□□□□ -0.12
NPIPB3-201ENST00000419180 FAM69CQ0P6D2 419 aa14.26□□□□□ -0.13
NPIPB3-201ENST00000419180 PRG4Q92954 1404 aaPredicted RBP14.24□□□□□ -0.13
NPIPB3-201ENST00000419180 FHAD1B1AJZ9 1412 aa14.24□□□□□ -0.13
NPIPB3-201ENST00000419180 ADCY10Q96PN6 1610 aa14.21□□□□□ -0.13
NPIPB3-201ENST00000419180 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
NPIPB3-201ENST00000419180 TSPOAP1O95153 1857 aa14.18□□□□□ -0.14
NPIPB3-201ENST00000419180 ERICH3Q5RHP9 1530 aa14.18□□□□□ -0.14
NPIPB3-201ENST00000419180 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
NPIPB3-201ENST00000419180 ADGRL1O94910 1474 aa14.16□□□□□ -0.14
NPIPB3-201ENST00000419180 HECW2Q9P2P5 1572 aa14.15□□□□□ -0.14
NPIPB3-201ENST00000419180 SLC24A1O60721 1099 aa14.14□□□□□ -0.15
NPIPB3-201ENST00000419180 NPM1P06748 294 aaKnown RBP eCLIP14.14□□□□□ -0.15
NPIPB3-201ENST00000419180 JPH4Q96JJ6 628 aa14.13□□□□□ -0.15
NPIPB3-201ENST00000419180 BIVM-ERCC5R4GMW8 1640 aa14.12□□□□□ -0.15
NPIPB3-201ENST00000419180 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
NPIPB3-201ENST00000419180 PPRC1Q5VV67 1664 aaKnown RBP14.09□□□□□ -0.15
NPIPB3-201ENST00000419180 FOXD1Q16676 465 aa14.04□□□□□ -0.16
NPIPB3-201ENST00000419180 GLI2P10070 1586 aa14.02□□□□□ -0.16
NPIPB3-201ENST00000419180 COL17A1Q9UMD9 1497 aaPredicted RBP13.99□□□□□ -0.17
NPIPB3-201ENST00000419180 ABCC2Q92887 1545 aa13.98□□□□□ -0.17
NPIPB3-201ENST00000419180 KIAA0586Q9BVV6 1533 aa13.98□□□□□ -0.17
NPIPB3-201ENST00000419180 ASXL2Q76L83 1435 aa13.97□□□□□ -0.17
NPIPB3-201ENST00000419180 PLB1Q6P1J6 1458 aa13.96□□□□□ -0.17
NPIPB3-201ENST00000419180 MAP3K4Q9Y6R4 1608 aa13.95□□□□□ -0.18
NPIPB3-201ENST00000419180 FBXO41Q8TF61 875 aa13.95□□□□□ -0.18
NPIPB3-201ENST00000419180 CUL7Q14999 1698 aa13.94□□□□□ -0.18
NPIPB3-201ENST00000419180 PTPRGP23470 1445 aa13.92□□□□□ -0.18
NPIPB3-201ENST00000419180 TEX14Q8IWB6 1497 aa13.9□□□□□ -0.18
NPIPB3-201ENST00000419180 EPRSP07814 1512 aaKnown RBP13.9□□□□□ -0.19
NPIPB3-201ENST00000419180 UHRF1BP1LA0JNW5 1464 aa13.89□□□□□ -0.19
NPIPB3-201ENST00000419180 TNIKQ9UKE5 1360 aa13.87□□□□□ -0.19
NPIPB3-201ENST00000419180 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
NPIPB3-201ENST00000419180 KDM5BQ9UGL1 1544 aa13.84□□□□□ -0.19
NPIPB3-201ENST00000419180 CARMIL2Q6F5E8 1435 aa13.83□□□□□ -0.2
NPIPB3-201ENST00000419180 ZCCHC11Q5TAX3 1644 aaKnown RBP13.82□□□□□ -0.2
NPIPB3-201ENST00000419180 UACAQ9BZF9 1416 aa13.82□□□□□ -0.2
NPIPB3-201ENST00000419180 KIF21BO75037 1637 aa13.81□□□□□ -0.2
NPIPB3-201ENST00000419180 IGF1RP08069 1367 aa13.81□□□□□ -0.2
NPIPB3-201ENST00000419180 IQGAP2Q13576 1575 aa13.8□□□□□ -0.2
NPIPB3-201ENST00000419180 DISP1Q96F81 1524 aa13.78□□□□□ -0.2
NPIPB3-201ENST00000419180 LMTK3Q96Q04 1460 aa13.77□□□□□ -0.21
NPIPB3-201ENST00000419180 WDR7Q9Y4E6 1490 aa13.76□□□□□ -0.21
NPIPB3-201ENST00000419180 KIF27Q86VH2 1401 aa13.76□□□□□ -0.21
NPIPB3-201ENST00000419180 CFAP43Q8NDM7 1665 aa13.75□□□□□ -0.21
NPIPB3-201ENST00000419180 MAGI3Q5TCQ9 1506 aa13.74□□□□□ -0.21
NPIPB3-201ENST00000419180 PTPRMP28827 1452 aa13.72□□□□□ -0.21
NPIPB3-201ENST00000419180 ADAMTSL3P82987 1691 aa13.72□□□□□ -0.21
NPIPB3-201ENST00000419180 KIAA0556O60303 1618 aa13.71□□□□□ -0.22
NPIPB3-201ENST00000419180 PCF11O94913 1555 aaKnown RBP13.71□□□□□ -0.22
NPIPB3-201ENST00000419180 CARMIL1Q5VZK9 1371 aa13.7□□□□□ -0.22
NPIPB3-201ENST00000419180 CD109Q6YHK3 1445 aa13.69□□□□□ -0.22
NPIPB3-201ENST00000419180 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
NPIPB3-201ENST00000419180 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
NPIPB3-201ENST00000419180 ARAP3Q8WWN8 1544 aa13.64□□□□□ -0.23
NPIPB3-201ENST00000419180 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
NPIPB3-201ENST00000419180 BCORL1Q5H9F3 1711 aa13.63□□□□□ -0.23
NPIPB3-201ENST00000419180 SOCS7O14512 581 aa13.61□□□□□ -0.23
NPIPB3-201ENST00000419180 ABCA8O94911 1581 aa13.6□□□□□ -0.23
NPIPB3-201ENST00000419180 ILDR2Q71H61 639 aa13.6□□□□□ -0.23
NPIPB3-201ENST00000419180 DISP3Q9P2K9 1392 aa13.57□□□□□ -0.24
NPIPB3-201ENST00000419180 RIMS1Q86UR5 1692 aaKnown RBP13.56□□□□□ -0.24
NPIPB3-201ENST00000419180 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
NPIPB3-201ENST00000419180 FRMPD1Q5SYB0 1578 aa13.56□□□□□ -0.24
NPIPB3-201ENST00000419180 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
NPIPB3-201ENST00000419180 CERKQ8TCT0 537 aa13.54□□□□□ -0.24
NPIPB3-201ENST00000419180 ABCA9Q8IUA7 1624 aa13.53□□□□□ -0.24
NPIPB3-201ENST00000419180 ARHGEF40Q8TER5 1519 aa13.53□□□□□ -0.24
NPIPB3-201ENST00000419180 SPATA31D1Q6ZQQ2 1576 aa13.53□□□□□ -0.24
NPIPB3-201ENST00000419180 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
NPIPB3-201ENST00000419180 PHLDB1Q86UU1 1377 aa13.52□□□□□ -0.25
NPIPB3-201ENST00000419180 HSPA2P54652 639 aa13.51□□□□□ -0.25
NPIPB3-201ENST00000419180 GOLGA3Q08378 1498 aa13.5□□□□□ -0.25
NPIPB3-201ENST00000419180 NEO1Q92859 1461 aa13.5□□□□□ -0.25
NPIPB3-201ENST00000419180 RAPGEF3O95398 923 aa13.49□□□□□ -0.25
NPIPB3-201ENST00000419180 ARID4BQ4LE39 1312 aaPredicted RBP13.48□□□□□ -0.25
NPIPB3-201ENST00000419180 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
NPIPB3-201ENST00000419180 SIGLEC1Q9BZZ2 1709 aa13.44□□□□□ -0.26
NPIPB3-201ENST00000419180 ATP10BO94823 1461 aa13.43□□□□□ -0.26
NPIPB3-201ENST00000419180 TTC37Q6PGP7 1564 aa13.42□□□□□ -0.26
NPIPB3-201ENST00000419180 FANCAO15360 1455 aa13.42□□□□□ -0.26
NPIPB3-201ENST00000419180 FER1L4A9Z1Z3 1794 aa13.4□□□□□ -0.26
NPIPB3-201ENST00000419180 ARID3CA6NKF2 412 aa13.4□□□□□ -0.26
NPIPB3-201ENST00000419180 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
NPIPB3-201ENST00000419180 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
NPIPB3-201ENST00000419180 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
NPIPB3-201ENST00000419180 DENND4BO75064 1496 aaPredicted RBP13.38□□□□□ -0.27
NPIPB3-201ENST00000419180 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
NPIPB3-201ENST00000419180 FHOD3Q2V2M9 1422 aa13.38□□□□□ -0.27
NPIPB3-201ENST00000419180 AKNAQ7Z591 1439 aa13.38□□□□□ -0.27
NPIPB3-201ENST00000419180 ZFYVE16Q7Z3T8 1539 aa13.37□□□□□ -0.27
NPIPB3-201ENST00000419180 STRCQ7RTU9 1775 aa13.36□□□□□ -0.27
NPIPB3-201ENST00000419180 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
NPIPB3-201ENST00000419180 CFAP74Q9C0B2 1584 aa13.36□□□□□ -0.27
NPIPB3-201ENST00000419180 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
NPIPB3-201ENST00000419180 RAPGEF6Q8TEU7 1601 aa13.34□□□□□ -0.27
NPIPB3-201ENST00000419180 ARHGEF12Q9NZN5 1544 aa13.33□□□□□ -0.28
NPIPB3-201ENST00000419180 MAGI2Q86UL8 1455 aa13.31□□□□□ -0.28
NPIPB3-201ENST00000419180 SAMD9Q5K651 1589 aa13.31□□□□□ -0.28
NPIPB3-201ENST00000419180 HECW1Q76N89 1606 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms