RNA–Protein interactions for RNA: ENST00000418533.6

LTBP1-207, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene LTBP1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-207ENST00000418533 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
LTBP1-207ENST00000418533 PPP1R15AO75807 674 aaPredicted RBP11.53□□□□□ -0.56
LTBP1-207ENST00000418533 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.56
LTBP1-207ENST00000418533 HNRNPUQ00839 825 aaKnown RBP eCLIP11.52□□□□□ -0.57
LTBP1-207ENST00000418533 CCDC88BA6NC98 1476 aa11.5□□□□□ -0.57
LTBP1-207ENST00000418533 SMARCA4P51532 1647 aa11.5□□□□□ -0.57
LTBP1-207ENST00000418533 CCDC136Q96JN2 1154 aa11.49□□□□□ -0.57
LTBP1-207ENST00000418533 MTUS2Q5JR59 1369 aa11.49□□□□□ -0.57
LTBP1-207ENST00000418533 PHF23Q9BUL5 403 aaPredicted RBP11.47□□□□□ -0.57
LTBP1-207ENST00000418533 UPF2Q9HAU5 1272 aaKnown RBP11.47□□□□□ -0.57
LTBP1-207ENST00000418533 ATAD2BQ9ULI0 1458 aa11.46□□□□□ -0.57
LTBP1-207ENST00000418533 ERICH6BQ5W0A0 696 aa11.46□□□□□ -0.57
LTBP1-207ENST00000418533 DDRGK1Q96HY6 314 aa11.46□□□□□ -0.58
LTBP1-207ENST00000418533 TNIKQ9UKE5 1360 aa11.45□□□□□ -0.58
LTBP1-207ENST00000418533 DDX10Q13206 875 aaKnown RBP11.45□□□□□ -0.58
LTBP1-207ENST00000418533 A0A0G2JS52 829 aa11.44□□□□□ -0.58
LTBP1-207ENST00000418533 SUPT16HQ9Y5B9 1047 aaKnown RBP11.44□□□□□ -0.58
LTBP1-207ENST00000418533 PPM1GO15355 546 aaPredicted RBP11.44□□□□□ -0.58
LTBP1-207ENST00000418533 CANXP27824 592 aaKnown RBP11.43□□□□□ -0.58
LTBP1-207ENST00000418533 CUX2O14529 1486 aa11.43□□□□□ -0.58
LTBP1-207ENST00000418533 CEP162Q5TB80 1403 aa11.43□□□□□ -0.58
LTBP1-207ENST00000418533 WIZO95785 1651 aa11.43□□□□□ -0.58
LTBP1-207ENST00000418533 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
LTBP1-207ENST00000418533 CHGAP10645 457 aaKnown RBP11.42□□□□□ -0.58
LTBP1-207ENST00000418533 PLEKHD1A6NEE1 506 aa11.42□□□□□ -0.58
LTBP1-207ENST00000418533 TSPY4P0CV99 314 aa11.4□□□□□ -0.58
LTBP1-207ENST00000418533 TSPY10P0CW01 314 aa11.4□□□□□ -0.58
LTBP1-207ENST00000418533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.58
LTBP1-207ENST00000418533 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
LTBP1-207ENST00000418533 CARMIL1Q5VZK9 1371 aa11.38□□□□□ -0.59
LTBP1-207ENST00000418533 TNNT2P45379 298 aaPredicted RBP11.38□□□□□ -0.59
LTBP1-207ENST00000418533 NOP58Q9Y2X3 529 aaKnown RBP11.38□□□□□ -0.59
LTBP1-207ENST00000418533 TONSLQ96HA7 1378 aa11.38□□□□□ -0.59
LTBP1-207ENST00000418533 FHAD1B1AJZ9 1412 aa11.37□□□□□ -0.59
LTBP1-207ENST00000418533 ABCC8Q09428 1581 aa11.37□□□□□ -0.59
LTBP1-207ENST00000418533 DEKP35659 375 aaKnown RBP11.37□□□□□ -0.59
LTBP1-207ENST00000418533 HSP90AA1P07900 732 aaKnown RBP11.36□□□□□ -0.59
LTBP1-207ENST00000418533 KCNH8Q96L42 1107 aa11.36□□□□□ -0.59
LTBP1-207ENST00000418533 SLC24A1O60721 1099 aa11.35□□□□□ -0.59
LTBP1-207ENST00000418533 FAM9BQ8IZU0 186 aa11.35□□□□□ -0.59
LTBP1-207ENST00000418533 SOGA1O94964 1423 aa11.35□□□□□ -0.59
LTBP1-207ENST00000418533 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.33□□□□□ -0.6
LTBP1-207ENST00000418533 TRIM44Q96DX7 344 aaPredicted RBP11.33□□□□□ -0.6
LTBP1-207ENST00000418533 PPP4R2Q9NY27 417 aa11.33□□□□□ -0.6
LTBP1-207ENST00000418533 BECN1Q14457 450 aa11.32□□□□□ -0.6
LTBP1-207ENST00000418533 RBM19Q9Y4C8 960 aaKnown RBP11.32□□□□□ -0.6
LTBP1-207ENST00000418533 EIF4G1Q04637 1599 aaKnown RBP11.32□□□□□ -0.6
LTBP1-207ENST00000418533 CYB5RLQ6IPT4 315 aa11.32□□□□□ -0.6
LTBP1-207ENST00000418533 CARMIL2Q6F5E8 1435 aa11.31□□□□□ -0.6
LTBP1-207ENST00000418533 MEX3CQ5U5Q3 659 aaKnown RBP11.3□□□□□ -0.6
LTBP1-207ENST00000418533 NCAPD3P42695 1498 aa11.3□□□□□ -0.6
LTBP1-207ENST00000418533 IRX6P78412 446 aaPredicted RBP11.29□□□□□ -0.6
LTBP1-207ENST00000418533 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
LTBP1-207ENST00000418533 RTN4Q9NQC3 1192 aaKnown RBP11.28□□□□□ -0.6
LTBP1-207ENST00000418533 FANCD2Q9BXW9 1451 aa11.27□□□□□ -0.6
LTBP1-207ENST00000418533 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
LTBP1-207ENST00000418533 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
LTBP1-207ENST00000418533 SF3B2Q13435 895 aaKnown RBP11.26□□□□□ -0.61
LTBP1-207ENST00000418533 TMC1Q8TDI8 760 aa11.26□□□□□ -0.61
LTBP1-207ENST00000418533 CHIC2Q9UKJ5 165 aa11.26□□□□□ -0.61
LTBP1-207ENST00000418533 HMGB2P26583 209 aaKnown RBP11.25□□□□□ -0.61
LTBP1-207ENST00000418533 CFDP1Q9UEE9 299 aaPredicted RBP11.25□□□□□ -0.61
LTBP1-207ENST00000418533 ARXQ96QS3 562 aa11.23□□□□□ -0.61
LTBP1-207ENST00000418533 FMN1Q68DA7 1419 aa11.22□□□□□ -0.61
LTBP1-207ENST00000418533 NCLP19338 710 aaKnown RBP11.22□□□□□ -0.61
LTBP1-207ENST00000418533 RAPGEF2Q9Y4G8 1499 aa11.22□□□□□ -0.61
LTBP1-207ENST00000418533 CCNB3Q8WWL7 1395 aa11.21□□□□□ -0.61
LTBP1-207ENST00000418533 EID1Q9Y6B2 187 aa11.21□□□□□ -0.61
LTBP1-207ENST00000418533 TDRD9Q8NDG6 1382 aaKnown RBP11.21□□□□□ -0.62
LTBP1-207ENST00000418533 DMRT2Q9Y5R5 561 aa11.21□□□□□ -0.62
LTBP1-207ENST00000418533 GOLGA6L22H0YM25 854 aa11.2□□□□□ -0.62
LTBP1-207ENST00000418533 L1TD1Q5T7N2 865 aaKnown RBP11.2□□□□□ -0.62
LTBP1-207ENST00000418533 NPHP1O15259 732 aa11.19□□□□□ -0.62
LTBP1-207ENST00000418533 HMGXB3Q12766 1538 aa11.19□□□□□ -0.62
LTBP1-207ENST00000418533 TMX4Q9H1E5 349 aaPredicted RBP11.18□□□□□ -0.62
LTBP1-207ENST00000418533 VPS8Q8N3P4 1428 aa11.18□□□□□ -0.62
LTBP1-207ENST00000418533 LAS1LQ9Y4W2 734 aaKnown RBP11.18□□□□□ -0.62
LTBP1-207ENST00000418533 EIF4G2P78344 907 aaKnown RBP eCLIP11.17□□□□□ -0.62
LTBP1-207ENST00000418533 MLECQ14165 292 aa11.17□□□□□ -0.62
LTBP1-207ENST00000418533 CCER2I3L3R5 266 aa11.16□□□□□ -0.62
LTBP1-207ENST00000418533 KANK1Q14678 1352 aa11.15□□□□□ -0.62
LTBP1-207ENST00000418533 CCDC9Q9Y3X0 531 aaKnown RBP11.15□□□□□ -0.63
LTBP1-207ENST00000418533 RRP7BPQ9NSQ0 103 aa11.14□□□□□ -0.63
LTBP1-207ENST00000418533 ARHGAP35Q9NRY4 1499 aa11.13□□□□□ -0.63
LTBP1-207ENST00000418533 CDK11BP21127 795 aaKnown RBP11.13□□□□□ -0.63
LTBP1-207ENST00000418533 CC2D2AQ9P2K1 1620 aa11.11□□□□□ -0.63
LTBP1-207ENST00000418533 SALL2Q9Y467 1007 aaPredicted RBP11.11□□□□□ -0.63
LTBP1-207ENST00000418533 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
LTBP1-207ENST00000418533 WDR43Q15061 677 aaKnown RBP eCLIP11.1□□□□□ -0.63
LTBP1-207ENST00000418533 RSPH6AQ9H0K4 717 aa11.1□□□□□ -0.63
LTBP1-207ENST00000418533 FGD5Q6ZNL6 1462 aa11.1□□□□□ -0.63
LTBP1-207ENST00000418533 USP35Q9P2H5 1018 aa11.09□□□□□ -0.63
LTBP1-207ENST00000418533 FAM69CQ0P6D2 419 aa11.08□□□□□ -0.64
LTBP1-207ENST00000418533 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
LTBP1-207ENST00000418533 B4GALNT3Q6L9W6 998 aa11.08□□□□□ -0.64
LTBP1-207ENST00000418533 ZBTB7CA1YPR0 619 aa11.07□□□□□ -0.64
LTBP1-207ENST00000418533 DNTTIP2Q5QJE6 756 aaKnown RBP11.07□□□□□ -0.64
LTBP1-207ENST00000418533 CFTRP13569 1480 aa11.07□□□□□ -0.64
LTBP1-207ENST00000418533 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
LTBP1-207ENST00000418533 GAPVD1Q14C86 1478 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms