RNA–Protein interactions for RNA: ENST00000418217.1

GTF2B-202, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-202ENST00000418217 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
GTF2B-202ENST00000418217 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
GTF2B-202ENST00000418217 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
GTF2B-202ENST00000418217 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
GTF2B-202ENST00000418217 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
GTF2B-202ENST00000418217 CC2D2AQ9P2K1 1620 aa11.76□□□□□ -0.53
GTF2B-202ENST00000418217 SCRIBQ14160 1630 aa11.73□□□□□ -0.53
GTF2B-202ENST00000418217 UNC13AQ9UPW8 1703 aa11.7□□□□□ -0.54
GTF2B-202ENST00000418217 BICRAQ9NZM4 1560 aa11.67□□□□□ -0.54
GTF2B-202ENST00000418217 NPM1P06748 294 aaKnown RBP eCLIP11.67□□□□□ -0.54
GTF2B-202ENST00000418217 PCDH10Q9P2E7 1040 aa11.67□□□□□ -0.54
GTF2B-202ENST00000418217 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
GTF2B-202ENST00000418217 ASTLQ6HA08 431 aaPredicted RBP11.65□□□□□ -0.54
GTF2B-202ENST00000418217 CUX2O14529 1486 aa11.64□□□□□ -0.55
GTF2B-202ENST00000418217 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
GTF2B-202ENST00000418217 MNX1P50219 401 aaPredicted RBP11.64□□□□□ -0.55
GTF2B-202ENST00000418217 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
GTF2B-202ENST00000418217 SLC39A7Q92504 469 aa11.63□□□□□ -0.55
GTF2B-202ENST00000418217 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
GTF2B-202ENST00000418217 C7P10643 843 aa11.62□□□□□ -0.55
GTF2B-202ENST00000418217 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
GTF2B-202ENST00000418217 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
GTF2B-202ENST00000418217 MAMSTRQ6ZN01 415 aa11.58□□□□□ -0.56
GTF2B-202ENST00000418217 LCE2DQ5TA82 110 aaPredicted RBP11.56□□□□□ -0.56
GTF2B-202ENST00000418217 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
GTF2B-202ENST00000418217 FAM163AQ96GL9 167 aaPredicted RBP11.54□□□□□ -0.56
GTF2B-202ENST00000418217 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
GTF2B-202ENST00000418217 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
GTF2B-202ENST00000418217 ERCC6Q03468 1493 aa11.5□□□□□ -0.57
GTF2B-202ENST00000418217 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
GTF2B-202ENST00000418217 TSPYL2Q9H2G4 693 aaPredicted RBP11.47□□□□□ -0.57
GTF2B-202ENST00000418217 POTEFA5A3E0 1075 aa11.42□□□□□ -0.58
GTF2B-202ENST00000418217 CCDC61Q9Y6R9 512 aa11.42□□□□□ -0.58
GTF2B-202ENST00000418217 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
GTF2B-202ENST00000418217 BMP2KQ9NSY1 1161 aaPredicted RBP11.38□□□□□ -0.59
GTF2B-202ENST00000418217 TRPC6Q9Y210 931 aa11.37□□□□□ -0.59
GTF2B-202ENST00000418217 TIE1P35590 1138 aa11.31□□□□□ -0.6
GTF2B-202ENST00000418217 CDAN1Q8IWY9 1227 aa11.31□□□□□ -0.6
GTF2B-202ENST00000418217 MAP3K13O43283 966 aa11.3□□□□□ -0.6
GTF2B-202ENST00000418217 COLQQ9Y215 455 aaPredicted RBP11.29□□□□□ -0.6
GTF2B-202ENST00000418217 BAZ1AQ9NRL2 1556 aaPredicted RBP11.28□□□□□ -0.6
GTF2B-202ENST00000418217 SEC24BO95487 1268 aa11.27□□□□□ -0.61
GTF2B-202ENST00000418217 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
GTF2B-202ENST00000418217 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
GTF2B-202ENST00000418217 PROM2Q8N271 834 aa11.22□□□□□ -0.61
GTF2B-202ENST00000418217 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
GTF2B-202ENST00000418217 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
GTF2B-202ENST00000418217 SMARCA2P51531 1590 aa11.19□□□□□ -0.62
GTF2B-202ENST00000418217 NCAPD3P42695 1498 aa11.19□□□□□ -0.62
GTF2B-202ENST00000418217 ATAD2BQ9ULI0 1458 aa11.19□□□□□ -0.62
GTF2B-202ENST00000418217 TRIM35Q9UPQ4 493 aa11.18□□□□□ -0.62
GTF2B-202ENST00000418217 ST18O60284 1047 aa11.17□□□□□ -0.62
GTF2B-202ENST00000418217 IER5LQ5T953 404 aa11.17□□□□□ -0.62
GTF2B-202ENST00000418217 PLEKHG5O94827 1062 aa11.16□□□□□ -0.62
GTF2B-202ENST00000418217 SLAIN1Q8ND83 568 aa11.16□□□□□ -0.62
GTF2B-202ENST00000418217 MIER1Q8N108 512 aa11.14□□□□□ -0.63
GTF2B-202ENST00000418217 RSF1Q96T23 1441 aaPredicted RBP11.14□□□□□ -0.63
GTF2B-202ENST00000418217 PEG3Q9GZU2 1588 aa11.13□□□□□ -0.63
GTF2B-202ENST00000418217 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
GTF2B-202ENST00000418217 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
GTF2B-202ENST00000418217 SGIP1Q9BQI5 828 aa11.11□□□□□ -0.63
GTF2B-202ENST00000418217 PCDHB13Q9Y5F0 798 aa11.11□□□□□ -0.63
GTF2B-202ENST00000418217 EHMT2Q96KQ7 1210 aa11.1□□□□□ -0.63
GTF2B-202ENST00000418217 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
GTF2B-202ENST00000418217 SPNS2Q8IVW8 549 aa11.05□□□□□ -0.64
GTF2B-202ENST00000418217 PLCG2P16885 1265 aa11.03□□□□□ -0.64
GTF2B-202ENST00000418217 IFNL1Q8IU54 200 aa11.03□□□□□ -0.64
GTF2B-202ENST00000418217 WIZO95785 1651 aa11.03□□□□□ -0.64
GTF2B-202ENST00000418217 TMEM106CQ9BVX2 250 aa11.02□□□□□ -0.65
GTF2B-202ENST00000418217 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
GTF2B-202ENST00000418217 IRX5P78411 483 aaPredicted RBP10.99□□□□□ -0.65
GTF2B-202ENST00000418217 TMEM121BQ9BXQ6 578 aaPredicted RBP10.99□□□□□ -0.65
GTF2B-202ENST00000418217 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
GTF2B-202ENST00000418217 NESP48681 1621 aa10.98□□□□□ -0.65
GTF2B-202ENST00000418217 PLCD3Q8N3E9 789 aa10.98□□□□□ -0.65
GTF2B-202ENST00000418217 NUBP1P53384 320 aa10.97□□□□□ -0.65
GTF2B-202ENST00000418217 PDS5BQ9NTI5 1447 aa10.95□□□□□ -0.66
GTF2B-202ENST00000418217 THOC2Q8NI27 1593 aaKnown RBP10.94□□□□□ -0.66
GTF2B-202ENST00000418217 SNPHO15079 494 aa10.93□□□□□ -0.66
GTF2B-202ENST00000418217 CYB5RLQ6IPT4 315 aa10.93□□□□□ -0.66
GTF2B-202ENST00000418217 MARVELD3Q96A59 401 aa10.93□□□□□ -0.66
GTF2B-202ENST00000418217 OCEL1Q9H607 264 aa10.93□□□□□ -0.66
GTF2B-202ENST00000418217 ZBTB47Q9UFB7 747 aaPredicted RBP10.92□□□□□ -0.66
GTF2B-202ENST00000418217 ILDR1Q86SU0 546 aaPredicted RBP10.9□□□□□ -0.66
GTF2B-202ENST00000418217 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
GTF2B-202ENST00000418217 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.9□□□□□ -0.66
GTF2B-202ENST00000418217 CADPSQ9ULU8 1353 aa10.88□□□□□ -0.67
GTF2B-202ENST00000418217 CCDC88BA6NC98 1476 aa10.87□□□□□ -0.67
GTF2B-202ENST00000418217 LAMC3Q9Y6N6 1575 aa10.86□□□□□ -0.67
GTF2B-202ENST00000418217 RIMBP3CA6NJZ7 1639 aa10.84□□□□□ -0.67
GTF2B-202ENST00000418217 RIMBP3BA6NNM3 1639 aa10.84□□□□□ -0.67
GTF2B-202ENST00000418217 RIMBP3Q9UFD9 1639 aa10.84□□□□□ -0.67
GTF2B-202ENST00000418217 CFTRP13569 1480 aa10.81□□□□□ -0.68
GTF2B-202ENST00000418217 EMP3P54852 163 aa10.8□□□□□ -0.68
GTF2B-202ENST00000418217 PYGBP11216 843 aa10.79□□□□□ -0.68
GTF2B-202ENST00000418217 MRC2Q9UBG0 1479 aa10.79□□□□□ -0.68
GTF2B-202ENST00000418217 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
GTF2B-202ENST00000418217 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
GTF2B-202ENST00000418217 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
GTF2B-202ENST00000418217 PCDHB8Q9UN66 801 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms