RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 SALL2Q9Y467 1007 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF8-203ENST00000417814 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
TNFRSF8-203ENST00000417814 TONSLQ96HA7 1378 aa18.51■□□□□ 0.55
TNFRSF8-203ENST00000417814 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
TNFRSF8-203ENST00000417814 ANP32EQ9BTT0 268 aa18.5■□□□□ 0.55
TNFRSF8-203ENST00000417814 CUX2O14529 1486 aa18.5■□□□□ 0.55
TNFRSF8-203ENST00000417814 ZNF777Q9ULD5 760 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF8-203ENST00000417814 CARMIL1Q5VZK9 1371 aa18.43■□□□□ 0.54
TNFRSF8-203ENST00000417814 FBLN2P98095 1184 aa18.41■□□□□ 0.54
TNFRSF8-203ENST00000417814 RBM19Q9Y4C8 960 aaKnown RBP18.41■□□□□ 0.54
TNFRSF8-203ENST00000417814 PHLDB1Q86UU1 1377 aa18.4■□□□□ 0.54
TNFRSF8-203ENST00000417814 FHOD3Q2V2M9 1422 aa18.4■□□□□ 0.54
TNFRSF8-203ENST00000417814 MTUS2Q5JR59 1369 aa18.38■□□□□ 0.53
TNFRSF8-203ENST00000417814 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF8-203ENST00000417814 SETD5Q9C0A6 1442 aa18.36■□□□□ 0.53
TNFRSF8-203ENST00000417814 B4GALNT3Q6L9W6 998 aa18.36■□□□□ 0.53
TNFRSF8-203ENST00000417814 MRS2Q9HD23 443 aa18.33■□□□□ 0.52
TNFRSF8-203ENST00000417814 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.52
TNFRSF8-203ENST00000417814 CCDC184Q52MB2 194 aa18.32■□□□□ 0.52
TNFRSF8-203ENST00000417814 CDK11AQ9UQ88 783 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF8-203ENST00000417814 IGF1RP08069 1367 aa18.31■□□□□ 0.52
TNFRSF8-203ENST00000417814 TDRD9Q8NDG6 1382 aaKnown RBP18.31■□□□□ 0.52
TNFRSF8-203ENST00000417814 NBR1Q14596 966 aa18.3■□□□□ 0.52
TNFRSF8-203ENST00000417814 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
TNFRSF8-203ENST00000417814 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
TNFRSF8-203ENST00000417814 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
TNFRSF8-203ENST00000417814 KDM2AQ9Y2K7 1162 aa18.29■□□□□ 0.52
TNFRSF8-203ENST00000417814 HSPA5P11021 654 aaKnown RBP18.28■□□□□ 0.52
TNFRSF8-203ENST00000417814 UNC13AQ9UPW8 1703 aa18.27■□□□□ 0.52
TNFRSF8-203ENST00000417814 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
TNFRSF8-203ENST00000417814 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
TNFRSF8-203ENST00000417814 PRXQ9BXM0 1461 aa18.23■□□□□ 0.51
TNFRSF8-203ENST00000417814 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
TNFRSF8-203ENST00000417814 CUX1P39880 1505 aa18.22■□□□□ 0.51
TNFRSF8-203ENST00000417814 EIF4G2P78344 907 aaKnown RBP eCLIP18.18■□□□□ 0.56e-6■■■■□ 25.1
TNFRSF8-203ENST00000417814 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
TNFRSF8-203ENST00000417814 L3MBTL2Q969R5 705 aa18.17■□□□□ 0.5
TNFRSF8-203ENST00000417814 RRBP1Q9P2E9 1410 aaKnown RBP18.15■□□□□ 0.5
TNFRSF8-203ENST00000417814 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF8-203ENST00000417814 C11orf95C9JLR9 678 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF8-203ENST00000417814 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF8-203ENST00000417814 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
TNFRSF8-203ENST00000417814 RGL3Q3MIN7 710 aa18.09■□□□□ 0.49
TNFRSF8-203ENST00000417814 FGD5Q6ZNL6 1462 aa18.08■□□□□ 0.49
TNFRSF8-203ENST00000417814 MSH5O43196 834 aa18.07■□□□□ 0.48
TNFRSF8-203ENST00000417814 WASHC2AQ641Q2 1341 aa18.07■□□□□ 0.48
TNFRSF8-203ENST00000417814 LRRC9Q6ZRR7 1453 aa18.07■□□□□ 0.48
TNFRSF8-203ENST00000417814 MPHOSPH9Q99550 1183 aa18.06■□□□□ 0.48
TNFRSF8-203ENST00000417814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.48
TNFRSF8-203ENST00000417814 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
TNFRSF8-203ENST00000417814 NESP48681 1621 aa18.04■□□□□ 0.48
TNFRSF8-203ENST00000417814 PRKCSHP14314 528 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF8-203ENST00000417814 CCER2I3L3R5 266 aa18.04■□□□□ 0.48
TNFRSF8-203ENST00000417814 CCDC136Q96JN2 1154 aa18.03■□□□□ 0.48
TNFRSF8-203ENST00000417814 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
TNFRSF8-203ENST00000417814 TMC1Q8TDI8 760 aa18.01■□□□□ 0.47
TNFRSF8-203ENST00000417814 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
TNFRSF8-203ENST00000417814 NBPF8Q3BBV2 869 aa17.98■□□□□ 0.47
TNFRSF8-203ENST00000417814 MYT1LQ9UL68 1186 aa17.97■□□□□ 0.47
TNFRSF8-203ENST00000417814 CCDC18Q5T9S5 1454 aa17.96■□□□□ 0.47
TNFRSF8-203ENST00000417814 PTPRKQ15262 1439 aa17.95■□□□□ 0.46
TNFRSF8-203ENST00000417814 PRKRIP1Q9H875 184 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF8-203ENST00000417814 CFTRP13569 1480 aa17.93■□□□□ 0.46
TNFRSF8-203ENST00000417814 ERICH3Q5RHP9 1530 aa17.92■□□□□ 0.46
TNFRSF8-203ENST00000417814 RTN4Q9NQC3 1192 aaKnown RBP17.92■□□□□ 0.46
TNFRSF8-203ENST00000417814 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.46
TNFRSF8-203ENST00000417814 SKAP1Q86WV1 359 aa17.91■□□□□ 0.46
TNFRSF8-203ENST00000417814 PPP4R2Q9NY27 417 aa17.91■□□□□ 0.46
TNFRSF8-203ENST00000417814 FANCD2Q9BXW9 1451 aa17.91■□□□□ 0.46
TNFRSF8-203ENST00000417814 CFDP1Q9UEE9 299 aaPredicted RBP17.9■□□□□ 0.46
TNFRSF8-203ENST00000417814 FGD6Q6ZV73 1430 aa17.9■□□□□ 0.46
TNFRSF8-203ENST00000417814 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
TNFRSF8-203ENST00000417814 TIAM1Q13009 1591 aa17.89■□□□□ 0.45
TNFRSF8-203ENST00000417814 PKD2Q13563 968 aa17.89■□□□□ 0.45
TNFRSF8-203ENST00000417814 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
TNFRSF8-203ENST00000417814 CC2D1BQ5T0F9 858 aaKnown RBP17.88■□□□□ 0.45
TNFRSF8-203ENST00000417814 CARD11Q9BXL7 1154 aa17.88■□□□□ 0.45
TNFRSF8-203ENST00000417814 DCAF11Q8TEB1 546 aa17.87■□□□□ 0.45
TNFRSF8-203ENST00000417814 TIMELESSQ9UNS1 1208 aa17.86■□□□□ 0.45
TNFRSF8-203ENST00000417814 PAK3O75914 559 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF8-203ENST00000417814 PLIN1O60240 522 aa17.84■□□□□ 0.45
TNFRSF8-203ENST00000417814 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.45
TNFRSF8-203ENST00000417814 KIF7Q2M1P5 1343 aa17.83■□□□□ 0.44
TNFRSF8-203ENST00000417814 PCF11O94913 1555 aaKnown RBP17.82■□□□□ 0.44
TNFRSF8-203ENST00000417814 RTL5Q5HYW3 569 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF8-203ENST00000417814 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF8-203ENST00000417814 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
TNFRSF8-203ENST00000417814 DEKP35659 375 aaKnown RBP17.8■□□□□ 0.44
TNFRSF8-203ENST00000417814 ANP32AP39687 249 aaKnown RBP17.8■□□□□ 0.44
TNFRSF8-203ENST00000417814 FMN1Q68DA7 1419 aa17.8■□□□□ 0.44
TNFRSF8-203ENST00000417814 AKNAQ7Z591 1439 aa17.79■□□□□ 0.44
TNFRSF8-203ENST00000417814 NCOA2Q15596 1464 aa17.78■□□□□ 0.44
TNFRSF8-203ENST00000417814 ST20-MTHFSA0A0A6YYL1 179 aa17.78■□□□□ 0.44
TNFRSF8-203ENST00000417814 NAIPQ13075 1403 aa17.76■□□□□ 0.43
TNFRSF8-203ENST00000417814 HNRNPMP52272 730 aaKnown RBP eCLIP17.76■□□□□ 0.43
TNFRSF8-203ENST00000417814 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
TNFRSF8-203ENST00000417814 UACAQ9BZF9 1416 aa17.75■□□□□ 0.43
TNFRSF8-203ENST00000417814 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF8-203ENST00000417814 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
TNFRSF8-203ENST00000417814 NOP58Q9Y2X3 529 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms