RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
HLA-DPA1-241ENST00000417724 FAM69CQ0P6D2 419 aa14□□□□□ -0.17
HLA-DPA1-241ENST00000417724 ABCC10Q5T3U5 1492 aa13.96□□□□□ -0.17
HLA-DPA1-241ENST00000417724 RUSC2Q8N2Y8 1516 aa13.94□□□□□ -0.18
HLA-DPA1-241ENST00000417724 MAPKBP1O60336 1514 aa13.93□□□□□ -0.18
HLA-DPA1-241ENST00000417724 KIAA0586Q9BVV6 1533 aa13.9□□□□□ -0.18
HLA-DPA1-241ENST00000417724 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.19
HLA-DPA1-241ENST00000417724 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
HLA-DPA1-241ENST00000417724 IGF1RP08069 1367 aa13.89□□□□□ -0.19
HLA-DPA1-241ENST00000417724 KIF27Q86VH2 1401 aa13.87□□□□□ -0.19
HLA-DPA1-241ENST00000417724 KDM6BO15054 1643 aa13.85□□□□□ -0.19
HLA-DPA1-241ENST00000417724 CUL7Q14999 1698 aa13.85□□□□□ -0.19
HLA-DPA1-241ENST00000417724 TSPOAP1O95153 1857 aa13.84□□□□□ -0.19
HLA-DPA1-241ENST00000417724 PTPRGP23470 1445 aa13.84□□□□□ -0.19
HLA-DPA1-241ENST00000417724 KDM4FA0A1W2PPD8 638 aa13.82□□□□□ -0.2
HLA-DPA1-241ENST00000417724 TTBK1Q5TCY1 1321 aaPredicted RBP13.81□□□□□ -0.2
HLA-DPA1-241ENST00000417724 CARMIL1Q5VZK9 1371 aa13.8□□□□□ -0.2
HLA-DPA1-241ENST00000417724 CARMIL2Q6F5E8 1435 aa13.8□□□□□ -0.2
HLA-DPA1-241ENST00000417724 TNIKQ9UKE5 1360 aa13.78□□□□□ -0.2
HLA-DPA1-241ENST00000417724 ABCC2Q92887 1545 aa13.76□□□□□ -0.21
HLA-DPA1-241ENST00000417724 PLB1Q6P1J6 1458 aa13.75□□□□□ -0.21
HLA-DPA1-241ENST00000417724 ASXL2Q76L83 1435 aa13.74□□□□□ -0.21
HLA-DPA1-241ENST00000417724 GLI2P10070 1586 aa13.72□□□□□ -0.21
HLA-DPA1-241ENST00000417724 IQGAP2Q13576 1575 aa13.72□□□□□ -0.21
HLA-DPA1-241ENST00000417724 UHRF1BP1LA0JNW5 1464 aa13.72□□□□□ -0.21
HLA-DPA1-241ENST00000417724 UACAQ9BZF9 1416 aa13.71□□□□□ -0.22
HLA-DPA1-241ENST00000417724 PPRC1Q5VV67 1664 aaKnown RBP13.67□□□□□ -0.22
HLA-DPA1-241ENST00000417724 DISP1Q96F81 1524 aa13.66□□□□□ -0.22
HLA-DPA1-241ENST00000417724 KDM5BQ9UGL1 1544 aa13.65□□□□□ -0.22
HLA-DPA1-241ENST00000417724 EPRSP07814 1512 aaKnown RBP13.64□□□□□ -0.23
HLA-DPA1-241ENST00000417724 ADGRL1O94910 1474 aa13.64□□□□□ -0.23
HLA-DPA1-241ENST00000417724 TEX14Q8IWB6 1497 aa13.64□□□□□ -0.23
HLA-DPA1-241ENST00000417724 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
HLA-DPA1-241ENST00000417724 ILDR1Q86SU0 546 aaPredicted RBP13.63□□□□□ -0.23
HLA-DPA1-241ENST00000417724 UGGT2Q9NYU1 1516 aa13.63□□□□□ -0.23
HLA-DPA1-241ENST00000417724 COL17A1Q9UMD9 1497 aaPredicted RBP13.62□□□□□ -0.23
HLA-DPA1-241ENST00000417724 MAP3K4Q9Y6R4 1608 aa13.62□□□□□ -0.23
HLA-DPA1-241ENST00000417724 ZCCHC11Q5TAX3 1644 aaKnown RBP13.61□□□□□ -0.23
HLA-DPA1-241ENST00000417724 KIAA0556O60303 1618 aa13.58□□□□□ -0.24
HLA-DPA1-241ENST00000417724 WDR7Q9Y4E6 1490 aa13.56□□□□□ -0.24
HLA-DPA1-241ENST00000417724 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
HLA-DPA1-241ENST00000417724 FAM9AQ8IZU1 332 aaPredicted RBP13.53□□□□□ -0.24
HLA-DPA1-241ENST00000417724 CD109Q6YHK3 1445 aa13.53□□□□□ -0.24
HLA-DPA1-241ENST00000417724 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
HLA-DPA1-241ENST00000417724 CTTNBP2Q8WZ74 1663 aa13.51□□□□□ -0.25
HLA-DPA1-241ENST00000417724 MAGI3Q5TCQ9 1506 aa13.51□□□□□ -0.25
HLA-DPA1-241ENST00000417724 CFAP43Q8NDM7 1665 aa13.5□□□□□ -0.25
HLA-DPA1-241ENST00000417724 HECW2Q9P2P5 1572 aa13.5□□□□□ -0.25
HLA-DPA1-241ENST00000417724 ABCA8O94911 1581 aa13.48□□□□□ -0.25
HLA-DPA1-241ENST00000417724 ARAP3Q8WWN8 1544 aa13.43□□□□□ -0.26
HLA-DPA1-241ENST00000417724 PHLDB1Q86UU1 1377 aa13.42□□□□□ -0.26
HLA-DPA1-241ENST00000417724 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
HLA-DPA1-241ENST00000417724 ARID3CA6NKF2 412 aa13.4□□□□□ -0.26
HLA-DPA1-241ENST00000417724 P3H3Q8IVL6 736 aa13.4□□□□□ -0.26
HLA-DPA1-241ENST00000417724 KIF21BO75037 1637 aa13.39□□□□□ -0.27
HLA-DPA1-241ENST00000417724 ATP10BO94823 1461 aa13.39□□□□□ -0.27
HLA-DPA1-241ENST00000417724 ABCA9Q8IUA7 1624 aa13.35□□□□□ -0.27
HLA-DPA1-241ENST00000417724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.35□□□□□ -0.27
HLA-DPA1-241ENST00000417724 RAPGEF3O95398 923 aa13.35□□□□□ -0.27
HLA-DPA1-241ENST00000417724 HNRNPUL2Q1KMD3 747 aaKnown RBP13.35□□□□□ -0.27
HLA-DPA1-241ENST00000417724 FBXO41Q8TF61 875 aa13.34□□□□□ -0.27
HLA-DPA1-241ENST00000417724 PTPRMP28827 1452 aa13.33□□□□□ -0.28
HLA-DPA1-241ENST00000417724 NEO1Q92859 1461 aa13.33□□□□□ -0.28
HLA-DPA1-241ENST00000417724 ADAMTSL3P82987 1691 aa13.32□□□□□ -0.28
HLA-DPA1-241ENST00000417724 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
HLA-DPA1-241ENST00000417724 ARID4BQ4LE39 1312 aaPredicted RBP13.32□□□□□ -0.28
HLA-DPA1-241ENST00000417724 RAPGEF6Q8TEU7 1601 aa13.3□□□□□ -0.28
HLA-DPA1-241ENST00000417724 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
HLA-DPA1-241ENST00000417724 PLEKHD1A6NEE1 506 aa13.28□□□□□ -0.28
HLA-DPA1-241ENST00000417724 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.29
HLA-DPA1-241ENST00000417724 NUP153P49790 1475 aaKnown RBP13.25□□□□□ -0.29
HLA-DPA1-241ENST00000417724 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
HLA-DPA1-241ENST00000417724 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
HLA-DPA1-241ENST00000417724 FRMPD1Q5SYB0 1578 aa13.24□□□□□ -0.29
HLA-DPA1-241ENST00000417724 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
HLA-DPA1-241ENST00000417724 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
HLA-DPA1-241ENST00000417724 AKNAQ7Z591 1439 aa13.22□□□□□ -0.29
HLA-DPA1-241ENST00000417724 LMTK3Q96Q04 1460 aa13.21□□□□□ -0.3
HLA-DPA1-241ENST00000417724 POGZQ7Z3K3 1410 aa13.21□□□□□ -0.3
HLA-DPA1-241ENST00000417724 FANCAO15360 1455 aa13.2□□□□□ -0.3
HLA-DPA1-241ENST00000417724 EEA1Q15075 1411 aa13.2□□□□□ -0.3
HLA-DPA1-241ENST00000417724 FHOD3Q2V2M9 1422 aa13.2□□□□□ -0.3
HLA-DPA1-241ENST00000417724 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
HLA-DPA1-241ENST00000417724 RICTORQ6R327 1708 aa13.19□□□□□ -0.3
HLA-DPA1-241ENST00000417724 ARHGEF40Q8TER5 1519 aa13.19□□□□□ -0.3
HLA-DPA1-241ENST00000417724 RIMS1Q86UR5 1692 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-241ENST00000417724 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
HLA-DPA1-241ENST00000417724 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.17□□□□□ -0.3
HLA-DPA1-241ENST00000417724 HSPA2P54652 639 aa13.16□□□□□ -0.3
HLA-DPA1-241ENST00000417724 MAGI2Q86UL8 1455 aa13.16□□□□□ -0.3
HLA-DPA1-241ENST00000417724 EFCAB5A4FU69 1503 aa13.15□□□□□ -0.3
HLA-DPA1-241ENST00000417724 ZMYM4Q5VZL5 1548 aa13.14□□□□□ -0.31
HLA-DPA1-241ENST00000417724 ZFYVE16Q7Z3T8 1539 aa13.14□□□□□ -0.31
HLA-DPA1-241ENST00000417724 MLECQ14165 292 aa13.14□□□□□ -0.31
HLA-DPA1-241ENST00000417724 TTC37Q6PGP7 1564 aa13.13□□□□□ -0.31
HLA-DPA1-241ENST00000417724 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
HLA-DPA1-241ENST00000417724 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
HLA-DPA1-241ENST00000417724 PLCH2O75038 1416 aa13.12□□□□□ -0.31
HLA-DPA1-241ENST00000417724 EFCAB2Q5VUJ9 269 aa13.11□□□□□ -0.31
HLA-DPA1-241ENST00000417724 CERKQ8TCT0 537 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms