RNA–Protein interactions for RNA: ENST00000417307.2

CTXN2-201, Transcript of cortexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTXN2, Length 2,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTXN2-201ENST00000417307 EIF5BO60841 1220 aaKnown RBP7.25□□□□□ -1.25
CTXN2-201ENST00000417307 CC2D2AQ9P2K1 1620 aa7.23□□□□□ -1.25
CTXN2-201ENST00000417307 SPDYE4A6NLX3 237 aa7.23□□□□□ -1.25
CTXN2-201ENST00000417307 PPARGC1BQ86YN6 1023 aaKnown RBP7.21□□□□□ -1.26
CTXN2-201ENST00000417307 C1orf115Q9H7X2 142 aa7.19□□□□□ -1.26
CTXN2-201ENST00000417307 RB1CC1Q8TDY2 1594 aa7.19□□□□□ -1.26
CTXN2-201ENST00000417307 ZMYND15Q9H091 742 aa7.18□□□□□ -1.26
CTXN2-201ENST00000417307 CCDC9Q9Y3X0 531 aaKnown RBP7.18□□□□□ -1.26
CTXN2-201ENST00000417307 NECTIN2Q92692 538 aa7.18□□□□□ -1.26
CTXN2-201ENST00000417307 CHGAP10645 457 aaKnown RBP7.16□□□□□ -1.26
CTXN2-201ENST00000417307 IGSF3O75054 1194 aa7.15□□□□□ -1.26
CTXN2-201ENST00000417307 CENPBP07199 599 aaPredicted RBP7.15□□□□□ -1.26
CTXN2-201ENST00000417307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.14□□□□□ -1.27
CTXN2-201ENST00000417307 SPOCK2Q92563 424 aa7.14□□□□□ -1.27
CTXN2-201ENST00000417307 RSPH6AQ9H0K4 717 aa7.14□□□□□ -1.27
CTXN2-201ENST00000417307 SOCS7O14512 581 aa7.14□□□□□ -1.27
CTXN2-201ENST00000417307 HOXD11P31277 338 aaPredicted RBP7.13□□□□□ -1.27
CTXN2-201ENST00000417307 LMOD2Q6P5Q4 547 aa7.12□□□□□ -1.27
CTXN2-201ENST00000417307 ARID3AQ99856 593 aa7.12□□□□□ -1.27
CTXN2-201ENST00000417307 ACIN1Q9UKV3 1341 aaKnown RBP7.11□□□□□ -1.27
CTXN2-201ENST00000417307 LMTK3Q96Q04 1460 aa7.1□□□□□ -1.27
CTXN2-201ENST00000417307 NEUROD2Q15784 382 aa7.1□□□□□ -1.27
CTXN2-201ENST00000417307 ZBTB7CA1YPR0 619 aa7.08□□□□□ -1.28
CTXN2-201ENST00000417307 MKRN4PQ13434 485 aaPredicted RBP7.07□□□□□ -1.28
CTXN2-201ENST00000417307 ERCC6Q03468 1493 aa7.07□□□□□ -1.28
CTXN2-201ENST00000417307 NKX1-1Q15270 411 aaPredicted RBP7.07□□□□□ -1.28
CTXN2-201ENST00000417307 HS6ST3Q8IZP7 471 aa7.07□□□□□ -1.28
CTXN2-201ENST00000417307 CLSPNQ9HAW4 1339 aa7.05□□□□□ -1.28
CTXN2-201ENST00000417307 PDIA4P13667 645 aaKnown RBP7.04□□□□□ -1.28
CTXN2-201ENST00000417307 GTPBP6O43824 516 aaPredicted RBP7.04□□□□□ -1.28
CTXN2-201ENST00000417307 PLEKHG5O94827 1062 aa7.03□□□□□ -1.28
CTXN2-201ENST00000417307 BICRAQ9NZM4 1560 aa7.03□□□□□ -1.28
CTXN2-201ENST00000417307 ILDR2Q71H61 639 aa7.03□□□□□ -1.28
CTXN2-201ENST00000417307 SLC24A3Q9HC58 644 aa7.02□□□□□ -1.29
CTXN2-201ENST00000417307 UNC13AQ9UPW8 1703 aa7.02□□□□□ -1.29
CTXN2-201ENST00000417307 ZC3H15Q8WU90 426 aaKnown RBP7.02□□□□□ -1.29
CTXN2-201ENST00000417307 PLSCR2Q9NRY7 297 aa7□□□□□ -1.29
CTXN2-201ENST00000417307 ARID3CA6NKF2 412 aa7□□□□□ -1.29
CTXN2-201ENST00000417307 RGS22Q8NE09 1264 aa7□□□□□ -1.29
CTXN2-201ENST00000417307 C1QBPQ07021 282 aaKnown RBP6.98□□□□□ -1.29
CTXN2-201ENST00000417307 ZNF219Q9P2Y4 722 aaPredicted RBP6.98□□□□□ -1.29
CTXN2-201ENST00000417307 KCNV2Q8TDN2 545 aa6.95□□□□□ -1.3
CTXN2-201ENST00000417307 FBXO41Q8TF61 875 aa6.95□□□□□ -1.3
CTXN2-201ENST00000417307 EIF4G1Q04637 1599 aaKnown RBP6.95□□□□□ -1.3
CTXN2-201ENST00000417307 APBB1O00213 710 aa6.94□□□□□ -1.3
CTXN2-201ENST00000417307 NEUROD1Q13562 356 aa6.94□□□□□ -1.3
CTXN2-201ENST00000417307 DIEXFQ68CQ4 756 aaKnown RBP6.94□□□□□ -1.3
CTXN2-201ENST00000417307 P3H3Q8IVL6 736 aa6.94□□□□□ -1.3
CTXN2-201ENST00000417307 KCTD17Q8N5Z5 321 aa6.94□□□□□ -1.3
CTXN2-201ENST00000417307 SAMD1Q6SPF0 538 aaPredicted RBP6.94□□□□□ -1.3
CTXN2-201ENST00000417307 CHMP4AQ9BY43 222 aa6.94□□□□□ -1.3
CTXN2-201ENST00000417307 RNF25Q96BH1 459 aaPredicted RBP6.93□□□□□ -1.3
CTXN2-201ENST00000417307 OSCARQ8IYS5 282 aa6.93□□□□□ -1.3
CTXN2-201ENST00000417307 CDK11BP21127 795 aaKnown RBP6.92□□□□□ -1.3
CTXN2-201ENST00000417307 CDK11AQ9UQ88 783 aaPredicted RBP6.92□□□□□ -1.3
CTXN2-201ENST00000417307 HSP90B1P14625 803 aaKnown RBP6.92□□□□□ -1.3
CTXN2-201ENST00000417307 PUS7Q96PZ0 661 aaKnown RBP6.92□□□□□ -1.3
CTXN2-201ENST00000417307 RAD21O60216 631 aa6.91□□□□□ -1.3
CTXN2-201ENST00000417307 ZNF428Q96B54 188 aa6.91□□□□□ -1.3
CTXN2-201ENST00000417307 WRNQ14191 1432 aaPredicted RBP eCLIP6.91□□□□□ -1.3
CTXN2-201ENST00000417307 MTMR7Q9Y216 660 aa6.91□□□□□ -1.3
CTXN2-201ENST00000417307 CCER1Q8TC90 406 aaPredicted RBP6.9□□□□□ -1.3
CTXN2-201ENST00000417307 MKRN3Q13064 507 aaKnown RBP6.9□□□□□ -1.31
CTXN2-201ENST00000417307 RNF39Q9H2S5 420 aa6.9□□□□□ -1.31
CTXN2-201ENST00000417307 RIMBP3CA6NJZ7 1639 aa6.89□□□□□ -1.31
CTXN2-201ENST00000417307 RIMBP3BA6NNM3 1639 aa6.89□□□□□ -1.31
CTXN2-201ENST00000417307 RIMBP3Q9UFD9 1639 aa6.89□□□□□ -1.31
CTXN2-201ENST00000417307 HMGB1P09429 215 aaKnown RBP6.89□□□□□ -1.31
CTXN2-201ENST00000417307 RSF1Q96T23 1441 aaPredicted RBP6.89□□□□□ -1.31
CTXN2-201ENST00000417307 ZMYND10O75800 440 aa6.88□□□□□ -1.31
CTXN2-201ENST00000417307 TRAIPQ9BWF2 469 aa6.88□□□□□ -1.31
CTXN2-201ENST00000417307 CYB5RLQ6IPT4 315 aa6.87□□□□□ -1.31
CTXN2-201ENST00000417307 GPBP1L1Q9HC44 474 aaPredicted RBP6.87□□□□□ -1.31
CTXN2-201ENST00000417307 NACADO15069 1562 aa6.87□□□□□ -1.31
CTXN2-201ENST00000417307 ZNF316A6NFI3 1004 aaPredicted RBP6.86□□□□□ -1.31
CTXN2-201ENST00000417307 CCDC82Q8N4S0 544 aa6.86□□□□□ -1.31
CTXN2-201ENST00000417307 DISP3Q9P2K9 1392 aa6.86□□□□□ -1.31
CTXN2-201ENST00000417307 IL27Q8NEV9 243 aa6.85□□□□□ -1.31
CTXN2-201ENST00000417307 FOXD4L5Q5VV16 416 aaPredicted RBP6.85□□□□□ -1.31
CTXN2-201ENST00000417307 FOXD4L4Q8WXT5 416 aaPredicted RBP6.85□□□□□ -1.31
CTXN2-201ENST00000417307 CIZ1Q9ULV3 898 aaPredicted RBP6.85□□□□□ -1.31
CTXN2-201ENST00000417307 EEA1Q15075 1411 aa6.84□□□□□ -1.32
CTXN2-201ENST00000417307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.83□□□□□ -1.32
CTXN2-201ENST00000417307 HNRNPUL2Q1KMD3 747 aaKnown RBP6.83□□□□□ -1.32
CTXN2-201ENST00000417307 U3KPZ7 1027 aaPredicted RBP6.82□□□□□ -1.32
CTXN2-201ENST00000417307 RBM25P49756 843 aaKnown RBP6.81□□□□□ -1.32
CTXN2-201ENST00000417307 CADPS2Q86UW7 1296 aa6.81□□□□□ -1.32
CTXN2-201ENST00000417307 MFAP1P55081 439 aaKnown RBP6.8□□□□□ -1.32
CTXN2-201ENST00000417307 TESPA1A2RU30 521 aaPredicted RBP6.79□□□□□ -1.32
CTXN2-201ENST00000417307 BAZ1AQ9NRL2 1556 aaPredicted RBP6.78□□□□□ -1.32
CTXN2-201ENST00000417307 POLA2Q14181 598 aa6.78□□□□□ -1.32
CTXN2-201ENST00000417307 TMCO4Q5TGY1 634 aa6.77□□□□□ -1.32
CTXN2-201ENST00000417307 BARGINQ6ZT62 677 aa6.77□□□□□ -1.32
CTXN2-201ENST00000417307 AEBP1Q8IUX7 1158 aa6.77□□□□□ -1.32
CTXN2-201ENST00000417307 KDM4CQ9H3R0 1056 aa6.77□□□□□ -1.32
CTXN2-201ENST00000417307 ONECUT3O60422 494 aaPredicted RBP6.77□□□□□ -1.33
CTXN2-201ENST00000417307 ARHGEF11O15085 1522 aa6.77□□□□□ -1.33
CTXN2-201ENST00000417307 TNIKQ9UKE5 1360 aa6.77□□□□□ -1.33
CTXN2-201ENST00000417307 PLCD3Q8N3E9 789 aa6.76□□□□□ -1.33
CTXN2-201ENST00000417307 KDM4FA0A1W2PPD8 638 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms