RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
THUMPD3-202ENST00000416603 VASPP50552 380 aaPredicted RBP13.28□□□□□ -0.28
THUMPD3-202ENST00000416603 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
THUMPD3-202ENST00000416603 EVX2Q03828 476 aa13.26□□□□□ -0.29
THUMPD3-202ENST00000416603 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
THUMPD3-202ENST00000416603 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
THUMPD3-202ENST00000416603 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
THUMPD3-202ENST00000416603 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
THUMPD3-202ENST00000416603 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
THUMPD3-202ENST00000416603 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
THUMPD3-202ENST00000416603 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
THUMPD3-202ENST00000416603 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
THUMPD3-202ENST00000416603 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
THUMPD3-202ENST00000416603 NUBP1P53384 320 aa13.05□□□□□ -0.32
THUMPD3-202ENST00000416603 GABBR2O75899 941 aa13.01□□□□□ -0.33
THUMPD3-202ENST00000416603 PHF12Q96QT6 1004 aa13□□□□□ -0.33
THUMPD3-202ENST00000416603 FAM212AQ96EL1 285 aa12.99□□□□□ -0.33
THUMPD3-202ENST00000416603 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
THUMPD3-202ENST00000416603 SMARCA4P51532 1647 aa12.96□□□□□ -0.33
THUMPD3-202ENST00000416603 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
THUMPD3-202ENST00000416603 CLCN6P51797 869 aa12.95□□□□□ -0.34
THUMPD3-202ENST00000416603 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
THUMPD3-202ENST00000416603 DCAF8Q5TAQ9 597 aa12.93□□□□□ -0.34
THUMPD3-202ENST00000416603 ERCC6Q03468 1493 aa12.92□□□□□ -0.34
THUMPD3-202ENST00000416603 ATAD2BQ9ULI0 1458 aa12.92□□□□□ -0.34
THUMPD3-202ENST00000416603 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
THUMPD3-202ENST00000416603 HMGXB3Q12766 1538 aa12.9□□□□□ -0.34
THUMPD3-202ENST00000416603 GALR2O43603 387 aaPredicted RBP12.88□□□□□ -0.35
THUMPD3-202ENST00000416603 BAZ1AQ9NRL2 1556 aaPredicted RBP12.87□□□□□ -0.35
THUMPD3-202ENST00000416603 CUX2O14529 1486 aa12.87□□□□□ -0.35
THUMPD3-202ENST00000416603 GSE1Q14687 1217 aa12.86□□□□□ -0.35
THUMPD3-202ENST00000416603 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
THUMPD3-202ENST00000416603 MS4A3Q96HJ5 214 aa12.85□□□□□ -0.35
THUMPD3-202ENST00000416603 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
THUMPD3-202ENST00000416603 BAZ1BQ9UIG0 1483 aaKnown RBP12.84□□□□□ -0.35
THUMPD3-202ENST00000416603 MAP3K13O43283 966 aa12.82□□□□□ -0.36
THUMPD3-202ENST00000416603 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
THUMPD3-202ENST00000416603 NESP48681 1621 aa12.81□□□□□ -0.36
THUMPD3-202ENST00000416603 PYGBP11216 843 aa12.8□□□□□ -0.36
THUMPD3-202ENST00000416603 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
THUMPD3-202ENST00000416603 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
THUMPD3-202ENST00000416603 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
THUMPD3-202ENST00000416603 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
THUMPD3-202ENST00000416603 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
THUMPD3-202ENST00000416603 SGIP1Q9BQI5 828 aa12.74□□□□□ -0.37
THUMPD3-202ENST00000416603 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
THUMPD3-202ENST00000416603 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
THUMPD3-202ENST00000416603 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
THUMPD3-202ENST00000416603 POTEIP0CG38 1075 aa12.72□□□□□ -0.37
THUMPD3-202ENST00000416603 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
THUMPD3-202ENST00000416603 TRPC6Q9Y210 931 aa12.69□□□□□ -0.38
THUMPD3-202ENST00000416603 CHRM1P11229 460 aaPredicted RBP12.66□□□□□ -0.38
THUMPD3-202ENST00000416603 WIZO95785 1651 aa12.65□□□□□ -0.38
THUMPD3-202ENST00000416603 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
THUMPD3-202ENST00000416603 PCDHB8Q9UN66 801 aa12.64□□□□□ -0.39
THUMPD3-202ENST00000416603 TIE1P35590 1138 aa12.63□□□□□ -0.39
THUMPD3-202ENST00000416603 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
THUMPD3-202ENST00000416603 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
THUMPD3-202ENST00000416603 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
THUMPD3-202ENST00000416603 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
THUMPD3-202ENST00000416603 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
THUMPD3-202ENST00000416603 ATN1P54259 1190 aaPredicted RBP12.58□□□□□ -0.4
THUMPD3-202ENST00000416603 TTLL13PA6NNM8 815 aa12.57□□□□□ -0.4
THUMPD3-202ENST00000416603 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
THUMPD3-202ENST00000416603 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
THUMPD3-202ENST00000416603 TMEM106CQ9BVX2 250 aa12.55□□□□□ -0.4
THUMPD3-202ENST00000416603 MRC2Q9UBG0 1479 aa12.54□□□□□ -0.4
THUMPD3-202ENST00000416603 ECM2O94769 699 aaPredicted RBP12.52□□□□□ -0.41
THUMPD3-202ENST00000416603 PKD2Q13563 968 aa12.52□□□□□ -0.41
THUMPD3-202ENST00000416603 WDR62O43379 1518 aa12.52□□□□□ -0.41
THUMPD3-202ENST00000416603 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
THUMPD3-202ENST00000416603 SLC39A7Q92504 469 aa12.5□□□□□ -0.41
THUMPD3-202ENST00000416603 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
THUMPD3-202ENST00000416603 PSEN1P49768 467 aa12.49□□□□□ -0.41
THUMPD3-202ENST00000416603 PDAP1Q13442 181 aaKnown RBP12.49□□□□□ -0.41
THUMPD3-202ENST00000416603 RNF25Q96BH1 459 aaPredicted RBP12.49□□□□□ -0.41
THUMPD3-202ENST00000416603 METRNQ9UJH8 293 aa12.48□□□□□ -0.41
THUMPD3-202ENST00000416603 RIOK3O14730 519 aaKnown RBP12.46□□□□□ -0.41
THUMPD3-202ENST00000416603 TOP2AP11388 1531 aaKnown RBP12.46□□□□□ -0.42
THUMPD3-202ENST00000416603 FANCD2Q9BXW9 1451 aa12.46□□□□□ -0.42
THUMPD3-202ENST00000416603 C7P10643 843 aa12.45□□□□□ -0.42
THUMPD3-202ENST00000416603 PRDM2Q13029 1718 aa12.44□□□□□ -0.42
THUMPD3-202ENST00000416603 RSF1Q96T23 1441 aaPredicted RBP12.44□□□□□ -0.42
THUMPD3-202ENST00000416603 CFTRP13569 1480 aa12.4□□□□□ -0.42
THUMPD3-202ENST00000416603 VGFO15240 615 aaPredicted RBP12.4□□□□□ -0.42
THUMPD3-202ENST00000416603 IER5LQ5T953 404 aa12.4□□□□□ -0.42
THUMPD3-202ENST00000416603 LHX8Q68G74 356 aa12.4□□□□□ -0.42
THUMPD3-202ENST00000416603 RGL2O15211 777 aa12.39□□□□□ -0.43
THUMPD3-202ENST00000416603 GOLGA2Q08379 1002 aa12.39□□□□□ -0.43
THUMPD3-202ENST00000416603 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
THUMPD3-202ENST00000416603 SEC24BO95487 1268 aa12.36□□□□□ -0.43
THUMPD3-202ENST00000416603 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
THUMPD3-202ENST00000416603 CABP2Q9NPB3 220 aa12.36□□□□□ -0.43
THUMPD3-202ENST00000416603 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
THUMPD3-202ENST00000416603 URB2Q14146 1524 aaKnown RBP12.36□□□□□ -0.43
THUMPD3-202ENST00000416603 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
THUMPD3-202ENST00000416603 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
THUMPD3-202ENST00000416603 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
THUMPD3-202ENST00000416603 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
THUMPD3-202ENST00000416603 PLCG2P16885 1265 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms