RNA–Protein interactions for RNA: ENST00000416118.1

CHEK2P3-201, Transcript of checkpoint kinase 2 pseudogene 3, humanhuman

BASIC

Gene CHEK2P3, Length 248 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2P3-201ENST00000416118 SHROOM4Q9ULL8 1493 aa9.95□□□□□ -0.82
CHEK2P3-201ENST00000416118 VASPP50552 380 aaPredicted RBP9.92□□□□□ -0.82
CHEK2P3-201ENST00000416118 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
CHEK2P3-201ENST00000416118 ZNF579Q8NAF0 562 aaKnown RBP9.88□□□□□ -0.83
CHEK2P3-201ENST00000416118 ZRANB1Q9UGI0 708 aa9.88□□□□□ -0.83
CHEK2P3-201ENST00000416118 CLCN6P51797 869 aa9.86□□□□□ -0.83
CHEK2P3-201ENST00000416118 GABBR2O75899 941 aa9.85□□□□□ -0.83
CHEK2P3-201ENST00000416118 PAK3O75914 559 aaPredicted RBP9.85□□□□□ -0.83
CHEK2P3-201ENST00000416118 NUBP1P53384 320 aa9.84□□□□□ -0.83
CHEK2P3-201ENST00000416118 EIF4G1Q04637 1599 aaKnown RBP9.84□□□□□ -0.83
CHEK2P3-201ENST00000416118 CECR2Q9BXF3 1484 aa9.83□□□□□ -0.84
CHEK2P3-201ENST00000416118 CC2D2AQ9P2K1 1620 aa9.82□□□□□ -0.84
CHEK2P3-201ENST00000416118 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
CHEK2P3-201ENST00000416118 IFNLR1Q8IU57 520 aaPredicted RBP9.79□□□□□ -0.84
CHEK2P3-201ENST00000416118 TSPYL2Q9H2G4 693 aaPredicted RBP9.79□□□□□ -0.84
CHEK2P3-201ENST00000416118 CCDC61Q9Y6R9 512 aa9.79□□□□□ -0.84
CHEK2P3-201ENST00000416118 PHF12Q96QT6 1004 aa9.76□□□□□ -0.85
CHEK2P3-201ENST00000416118 KLHL34Q8N239 644 aa9.75□□□□□ -0.85
CHEK2P3-201ENST00000416118 FAM212AQ96EL1 285 aa9.72□□□□□ -0.85
CHEK2P3-201ENST00000416118 GALR2O43603 387 aaPredicted RBP9.71□□□□□ -0.86
CHEK2P3-201ENST00000416118 KIF12Q96FN5 646 aa9.7□□□□□ -0.86
CHEK2P3-201ENST00000416118 SPOCK2Q92563 424 aa9.69□□□□□ -0.86
CHEK2P3-201ENST00000416118 POTEIP0CG38 1075 aa9.66□□□□□ -0.86
CHEK2P3-201ENST00000416118 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
CHEK2P3-201ENST00000416118 MS4A3Q96HJ5 214 aa9.66□□□□□ -0.86
CHEK2P3-201ENST00000416118 GSE1Q14687 1217 aa9.65□□□□□ -0.86
CHEK2P3-201ENST00000416118 SGIP1Q9BQI5 828 aa9.65□□□□□ -0.86
CHEK2P3-201ENST00000416118 MAP3K13O43283 966 aa9.64□□□□□ -0.87
CHEK2P3-201ENST00000416118 DCBLD2Q96PD2 775 aa9.61□□□□□ -0.87
CHEK2P3-201ENST00000416118 CHRM1P11229 460 aaPredicted RBP9.58□□□□□ -0.88
CHEK2P3-201ENST00000416118 NCAPD3P42695 1498 aa9.58□□□□□ -0.88
CHEK2P3-201ENST00000416118 ATAD2BQ9ULI0 1458 aa9.58□□□□□ -0.88
CHEK2P3-201ENST00000416118 PYGBP11216 843 aa9.57□□□□□ -0.88
CHEK2P3-201ENST00000416118 ASTLQ6HA08 431 aaPredicted RBP9.57□□□□□ -0.88
CHEK2P3-201ENST00000416118 PCDHB13Q9Y5F0 798 aa9.57□□□□□ -0.88
CHEK2P3-201ENST00000416118 IFNL1Q8IU54 200 aa9.55□□□□□ -0.88
CHEK2P3-201ENST00000416118 TRPC6Q9Y210 931 aa9.55□□□□□ -0.88
CHEK2P3-201ENST00000416118 TIE1P35590 1138 aa9.54□□□□□ -0.88
CHEK2P3-201ENST00000416118 CIZ1Q9ULV3 898 aaPredicted RBP9.54□□□□□ -0.88
CHEK2P3-201ENST00000416118 SMARCA4P51532 1647 aa9.53□□□□□ -0.88
CHEK2P3-201ENST00000416118 ATMINO43313 823 aaPredicted RBP9.53□□□□□ -0.88
CHEK2P3-201ENST00000416118 BAZ1AQ9NRL2 1556 aaPredicted RBP9.52□□□□□ -0.89
CHEK2P3-201ENST00000416118 SMARCA2P51531 1590 aa9.51□□□□□ -0.89
CHEK2P3-201ENST00000416118 BMP2KQ9NSY1 1161 aaPredicted RBP9.51□□□□□ -0.89
CHEK2P3-201ENST00000416118 PELP1Q8IZL8 1130 aaKnown RBP9.5□□□□□ -0.89
CHEK2P3-201ENST00000416118 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
CHEK2P3-201ENST00000416118 BAZ1BQ9UIG0 1483 aaKnown RBP9.48□□□□□ -0.89
CHEK2P3-201ENST00000416118 ATN1P54259 1190 aaPredicted RBP9.48□□□□□ -0.89
CHEK2P3-201ENST00000416118 ZNF467Q7Z7K2 595 aaPredicted RBP9.48□□□□□ -0.89
CHEK2P3-201ENST00000416118 MROH2BQ7Z745 1585 aa9.48□□□□□ -0.89
CHEK2P3-201ENST00000416118 HMGXB3Q12766 1538 aa9.47□□□□□ -0.89
CHEK2P3-201ENST00000416118 TTLL13PA6NNM8 815 aa9.47□□□□□ -0.89
CHEK2P3-201ENST00000416118 PCDHB8Q9UN66 801 aa9.46□□□□□ -0.9
CHEK2P3-201ENST00000416118 PEG3Q9GZU2 1588 aa9.43□□□□□ -0.9
CHEK2P3-201ENST00000416118 ERCC6Q03468 1493 aa9.43□□□□□ -0.9
CHEK2P3-201ENST00000416118 SLC39A7Q92504 469 aa9.43□□□□□ -0.9
CHEK2P3-201ENST00000416118 C7P10643 843 aa9.42□□□□□ -0.9
CHEK2P3-201ENST00000416118 TMEM106CQ9BVX2 250 aa9.41□□□□□ -0.9
CHEK2P3-201ENST00000416118 NESP48681 1621 aa9.41□□□□□ -0.9
CHEK2P3-201ENST00000416118 LHX8Q68G74 356 aa9.4□□□□□ -0.9
CHEK2P3-201ENST00000416118 TRIM35Q9UPQ4 493 aa9.4□□□□□ -0.9
CHEK2P3-201ENST00000416118 METRNQ9UJH8 293 aa9.39□□□□□ -0.91
CHEK2P3-201ENST00000416118 PKD2Q13563 968 aa9.38□□□□□ -0.91
CHEK2P3-201ENST00000416118 PSEN1P49768 467 aa9.37□□□□□ -0.91
CHEK2P3-201ENST00000416118 PDAP1Q13442 181 aaKnown RBP9.37□□□□□ -0.91
CHEK2P3-201ENST00000416118 IER5LQ5T953 404 aa9.37□□□□□ -0.91
CHEK2P3-201ENST00000416118 RNF25Q96BH1 459 aaPredicted RBP9.36□□□□□ -0.91
CHEK2P3-201ENST00000416118 CUX2O14529 1486 aa9.35□□□□□ -0.91
CHEK2P3-201ENST00000416118 POTEFA5A3E0 1075 aa9.35□□□□□ -0.91
CHEK2P3-201ENST00000416118 RSF1Q96T23 1441 aaPredicted RBP9.34□□□□□ -0.91
CHEK2P3-201ENST00000416118 POTEB2H3BUK9 544 aa9.34□□□□□ -0.91
CHEK2P3-201ENST00000416118 WIZO95785 1651 aa9.33□□□□□ -0.92
CHEK2P3-201ENST00000416118 RIOK3O14730 519 aaKnown RBP9.33□□□□□ -0.92
CHEK2P3-201ENST00000416118 ECM2O94769 699 aaPredicted RBP9.32□□□□□ -0.92
CHEK2P3-201ENST00000416118 CADPSQ9ULU8 1353 aa9.32□□□□□ -0.92
CHEK2P3-201ENST00000416118 LAMC3Q9Y6N6 1575 aa9.31□□□□□ -0.92
CHEK2P3-201ENST00000416118 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
CHEK2P3-201ENST00000416118 IRX5P78411 483 aaPredicted RBP9.3□□□□□ -0.92
CHEK2P3-201ENST00000416118 COLQQ9Y215 455 aaPredicted RBP9.3□□□□□ -0.92
CHEK2P3-201ENST00000416118 VGFO15240 615 aaPredicted RBP9.29□□□□□ -0.92
CHEK2P3-201ENST00000416118 DNAJC5Q9H3Z4 198 aa9.29□□□□□ -0.92
CHEK2P3-201ENST00000416118 SEC24BO95487 1268 aa9.27□□□□□ -0.93
CHEK2P3-201ENST00000416118 POTEJP0CG39 1038 aa9.27□□□□□ -0.93
CHEK2P3-201ENST00000416118 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
CHEK2P3-201ENST00000416118 RGL2O15211 777 aa9.25□□□□□ -0.93
CHEK2P3-201ENST00000416118 ILDR1Q86SU0 546 aaPredicted RBP9.25□□□□□ -0.93
CHEK2P3-201ENST00000416118 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
CHEK2P3-201ENST00000416118 TAOK2Q9UL54 1235 aa9.25□□□□□ -0.93
CHEK2P3-201ENST00000416118 GOLGA2Q08379 1002 aa9.24□□□□□ -0.93
CHEK2P3-201ENST00000416118 MKRN3Q13064 507 aaKnown RBP9.24□□□□□ -0.93
CHEK2P3-201ENST00000416118 OTUD5Q96G74 571 aa9.24□□□□□ -0.93
CHEK2P3-201ENST00000416118 OCEL1Q9H607 264 aa9.24□□□□□ -0.93
CHEK2P3-201ENST00000416118 CABP2Q9NPB3 220 aa9.24□□□□□ -0.93
CHEK2P3-201ENST00000416118 TOP2AP11388 1531 aaKnown RBP9.24□□□□□ -0.93
CHEK2P3-201ENST00000416118 THOC2Q8NI27 1593 aaKnown RBP9.24□□□□□ -0.93
CHEK2P3-201ENST00000416118 PLCG2P16885 1265 aa9.22□□□□□ -0.93
CHEK2P3-201ENST00000416118 PDCD7Q8N8D1 485 aaKnown RBP9.21□□□□□ -0.94
CHEK2P3-201ENST00000416118 CFTRP13569 1480 aa9.21□□□□□ -0.94
CHEK2P3-201ENST00000416118 MRC2Q9UBG0 1479 aa9.21□□□□□ -0.94
CHEK2P3-201ENST00000416118 FANCD2Q9BXW9 1451 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms