RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 KDM2AQ9Y2K7 1162 aa17.4■□□□□ 0.38
SCN1B-202ENST00000415950 KANK4Q5T7N3 995 aaPredicted RBP17.4■□□□□ 0.38
SCN1B-202ENST00000415950 HSP90AA1P07900 732 aaKnown RBP17.39■□□□□ 0.37
SCN1B-202ENST00000415950 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
SCN1B-202ENST00000415950 NEFMP07197 916 aa17.34■□□□□ 0.37
SCN1B-202ENST00000415950 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.37
SCN1B-202ENST00000415950 LAS1LQ9Y4W2 734 aaKnown RBP17.32■□□□□ 0.36
SCN1B-202ENST00000415950 ANP32BQ92688 251 aaKnown RBP17.3■□□□□ 0.36
SCN1B-202ENST00000415950 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
SCN1B-202ENST00000415950 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
SCN1B-202ENST00000415950 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.35
SCN1B-202ENST00000415950 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
SCN1B-202ENST00000415950 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
SCN1B-202ENST00000415950 DEKP35659 375 aaKnown RBP17.23■□□□□ 0.35
SCN1B-202ENST00000415950 PPP4R2Q9NY27 417 aa17.22■□□□□ 0.35
SCN1B-202ENST00000415950 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
SCN1B-202ENST00000415950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCN1B-202ENST00000415950 EEA1Q15075 1411 aa17.19■□□□□ 0.34
SCN1B-202ENST00000415950 NOP58Q9Y2X3 529 aaKnown RBP17.18■□□□□ 0.34
SCN1B-202ENST00000415950 GLIPR1L2Q4G1C9 344 aa17.18■□□□□ 0.34
SCN1B-202ENST00000415950 CCNB3Q8WWL7 1395 aa17.17■□□□□ 0.34
SCN1B-202ENST00000415950 FOXD1Q16676 465 aa17.15■□□□□ 0.34
SCN1B-202ENST00000415950 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
SCN1B-202ENST00000415950 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
SCN1B-202ENST00000415950 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
SCN1B-202ENST00000415950 MROH2BQ7Z745 1585 aa17.14■□□□□ 0.33
SCN1B-202ENST00000415950 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.13■□□□□ 0.33
SCN1B-202ENST00000415950 RUSC2Q8N2Y8 1516 aa17.12■□□□□ 0.33
SCN1B-202ENST00000415950 BAZ1AQ9NRL2 1556 aaPredicted RBP17.08■□□□□ 0.33
SCN1B-202ENST00000415950 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.32
SCN1B-202ENST00000415950 RGS3P49796 1198 aa17.07■□□□□ 0.32
SCN1B-202ENST00000415950 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
SCN1B-202ENST00000415950 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
SCN1B-202ENST00000415950 WDR43Q15061 677 aaKnown RBP eCLIP17.06■□□□□ 0.32
SCN1B-202ENST00000415950 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
SCN1B-202ENST00000415950 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.04■□□□□ 0.32
SCN1B-202ENST00000415950 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.32
SCN1B-202ENST00000415950 DHX57Q6P158 1386 aaKnown RBP17.02■□□□□ 0.32
SCN1B-202ENST00000415950 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
SCN1B-202ENST00000415950 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
SCN1B-202ENST00000415950 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
SCN1B-202ENST00000415950 NEUROD2Q15784 382 aa16.98■□□□□ 0.31
SCN1B-202ENST00000415950 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.31
SCN1B-202ENST00000415950 TSPY4P0CV99 314 aa16.95■□□□□ 0.3
SCN1B-202ENST00000415950 TSPY10P0CW01 314 aa16.95■□□□□ 0.3
SCN1B-202ENST00000415950 SETD5Q9C0A6 1442 aa16.95■□□□□ 0.3
SCN1B-202ENST00000415950 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
SCN1B-202ENST00000415950 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
SCN1B-202ENST00000415950 TRIM44Q96DX7 344 aaPredicted RBP16.92■□□□□ 0.3
SCN1B-202ENST00000415950 TPRNQ4KMQ1 711 aa16.91■□□□□ 0.3
SCN1B-202ENST00000415950 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
SCN1B-202ENST00000415950 WIZO95785 1651 aa16.89■□□□□ 0.29
SCN1B-202ENST00000415950 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
SCN1B-202ENST00000415950 RAPGEF2Q9Y4G8 1499 aa16.88■□□□□ 0.29
SCN1B-202ENST00000415950 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
SCN1B-202ENST00000415950 BECN1Q14457 450 aa16.87■□□□□ 0.29
SCN1B-202ENST00000415950 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
SCN1B-202ENST00000415950 DDRGK1Q96HY6 314 aa16.86■□□□□ 0.29
SCN1B-202ENST00000415950 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
SCN1B-202ENST00000415950 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
SCN1B-202ENST00000415950 FRAT1Q92837 279 aaPredicted RBP16.85■□□□□ 0.29
SCN1B-202ENST00000415950 L3MBTL2Q969R5 705 aa16.85■□□□□ 0.29
SCN1B-202ENST00000415950 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
SCN1B-202ENST00000415950 CFDP1Q9UEE9 299 aaPredicted RBP16.84■□□□□ 0.29
SCN1B-202ENST00000415950 TIMELESSQ9UNS1 1208 aa16.84■□□□□ 0.29
SCN1B-202ENST00000415950 DCAF11Q8TEB1 546 aa16.83■□□□□ 0.29
SCN1B-202ENST00000415950 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
SCN1B-202ENST00000415950 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.28
SCN1B-202ENST00000415950 NAP1L5Q96NT1 182 aaPredicted RBP16.81■□□□□ 0.28
SCN1B-202ENST00000415950 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
SCN1B-202ENST00000415950 MYH16Q9H6N6 1097 aa16.8■□□□□ 0.28
SCN1B-202ENST00000415950 ERICH6BQ5W0A0 696 aa16.79■□□□□ 0.28
SCN1B-202ENST00000415950 IPO9Q96P70 1041 aaKnown RBP16.79■□□□□ 0.28
SCN1B-202ENST00000415950 KNSTRNQ9Y448 316 aa16.77■□□□□ 0.28
SCN1B-202ENST00000415950 MPHOSPH9Q99550 1183 aa16.77■□□□□ 0.27
SCN1B-202ENST00000415950 PLIN1O60240 522 aa16.76■□□□□ 0.27
SCN1B-202ENST00000415950 SLKQ9H2G2 1235 aaPredicted RBP16.76■□□□□ 0.27
SCN1B-202ENST00000415950 RCAN3Q9UKA8 241 aa16.76■□□□□ 0.27
SCN1B-202ENST00000415950 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
SCN1B-202ENST00000415950 CUX2O14529 1486 aa16.76■□□□□ 0.27
SCN1B-202ENST00000415950 PTMAP06454 111 aaKnown RBP16.76■□□□□ 0.27
SCN1B-202ENST00000415950 GOLGA6L22H0YM25 854 aa16.75■□□□□ 0.27
SCN1B-202ENST00000415950 DNTTIP2Q5QJE6 756 aaKnown RBP16.75■□□□□ 0.27
SCN1B-202ENST00000415950 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
SCN1B-202ENST00000415950 BICRAQ9NZM4 1560 aa16.74■□□□□ 0.27
SCN1B-202ENST00000415950 GZF1Q9H116 711 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-202ENST00000415950 PRKRIP1Q9H875 184 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-202ENST00000415950 PKD2Q13563 968 aa16.72■□□□□ 0.27
SCN1B-202ENST00000415950 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
SCN1B-202ENST00000415950 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
SCN1B-202ENST00000415950 CHMP7Q8WUX9 453 aaPredicted RBP16.71■□□□□ 0.27
SCN1B-202ENST00000415950 PLCB2Q00722 1185 aa16.7■□□□□ 0.26
SCN1B-202ENST00000415950 EXOC6Q8TAG9 804 aa16.69■□□□□ 0.26
SCN1B-202ENST00000415950 ERCC6Q03468 1493 aa16.69■□□□□ 0.26
SCN1B-202ENST00000415950 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
SCN1B-202ENST00000415950 PLEKHD1A6NEE1 506 aa16.68■□□□□ 0.26
SCN1B-202ENST00000415950 ZBTB7CA1YPR0 619 aa16.68■□□□□ 0.26
SCN1B-202ENST00000415950 FTSJ3Q8IY81 847 aaKnown RBP16.67■□□□□ 0.26
SCN1B-202ENST00000415950 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
SCN1B-202ENST00000415950 A0A0G2JS52 829 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms