RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 PRG4Q92954 1404 aaPredicted RBP24.72■■□□□ 1.55
RAPGEF1-204ENST00000414781 DIP2BQ9P265 1576 aa24.7■■□□□ 1.54
RAPGEF1-204ENST00000414781 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.54
RAPGEF1-204ENST00000414781 JPH4Q96JJ6 628 aa24.62■■□□□ 1.53
RAPGEF1-204ENST00000414781 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
RAPGEF1-204ENST00000414781 ADCY10Q96PN6 1610 aa24.52■■□□□ 1.52
RAPGEF1-204ENST00000414781 ADGRL1O94910 1474 aa24.5■■□□□ 1.51
RAPGEF1-204ENST00000414781 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.51
RAPGEF1-204ENST00000414781 HECW2Q9P2P5 1572 aa24.44■■□□□ 1.5
RAPGEF1-204ENST00000414781 TSPOAP1O95153 1857 aa24.43■■□□□ 1.5
RAPGEF1-204ENST00000414781 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
RAPGEF1-204ENST00000414781 BIVM-ERCC5R4GMW8 1640 aa24.36■■□□□ 1.49
RAPGEF1-204ENST00000414781 FBXO41Q8TF61 875 aa24.31■■□□□ 1.48
RAPGEF1-204ENST00000414781 KIAA0586Q9BVV6 1533 aa24.29■■□□□ 1.48
RAPGEF1-204ENST00000414781 GLI2P10070 1586 aa24.29■■□□□ 1.48
RAPGEF1-204ENST00000414781 PLB1Q6P1J6 1458 aa24.28■■□□□ 1.48
RAPGEF1-204ENST00000414781 ABCC2Q92887 1545 aa24.25■■□□□ 1.47
RAPGEF1-204ENST00000414781 PTPRGP23470 1445 aa24.24■■□□□ 1.47
RAPGEF1-204ENST00000414781 PPRC1Q5VV67 1664 aaKnown RBP24.22■■□□□ 1.47
RAPGEF1-204ENST00000414781 ASXL2Q76L83 1435 aa24.22■■□□□ 1.47
RAPGEF1-204ENST00000414781 TEX14Q8IWB6 1497 aa24.18■■□□□ 1.46
RAPGEF1-204ENST00000414781 COL17A1Q9UMD9 1497 aaPredicted RBP24.18■■□□□ 1.46
RAPGEF1-204ENST00000414781 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
RAPGEF1-204ENST00000414781 CARMIL2Q6F5E8 1435 aa24.11■■□□□ 1.45
RAPGEF1-204ENST00000414781 UHRF1BP1LA0JNW5 1464 aa24.11■■□□□ 1.45
RAPGEF1-204ENST00000414781 EPRSP07814 1512 aaKnown RBP24.07■■□□□ 1.44
RAPGEF1-204ENST00000414781 MAP3K4Q9Y6R4 1608 aa24.06■■□□□ 1.44
RAPGEF1-204ENST00000414781 TTBK1Q5TCY1 1321 aaPredicted RBP24.04■■□□□ 1.44
RAPGEF1-204ENST00000414781 UACAQ9BZF9 1416 aa24.02■■□□□ 1.44
RAPGEF1-204ENST00000414781 CUL7Q14999 1698 aa24.02■■□□□ 1.44
RAPGEF1-204ENST00000414781 IGF1RP08069 1367 aa24.01■■□□□ 1.43
RAPGEF1-204ENST00000414781 KDM5BQ9UGL1 1544 aa23.98■■□□□ 1.43
RAPGEF1-204ENST00000414781 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
RAPGEF1-204ENST00000414781 LMTK3Q96Q04 1460 aa23.92■■□□□ 1.42
RAPGEF1-204ENST00000414781 IQGAP2Q13576 1575 aa23.88■■□□□ 1.41
RAPGEF1-204ENST00000414781 WDR7Q9Y4E6 1490 aa23.86■■□□□ 1.41
RAPGEF1-204ENST00000414781 MAGI3Q5TCQ9 1506 aa23.85■■□□□ 1.41
RAPGEF1-204ENST00000414781 ZCCHC11Q5TAX3 1644 aaKnown RBP23.84■■□□□ 1.41
RAPGEF1-204ENST00000414781 CARMIL1Q5VZK9 1371 aa23.84■■□□□ 1.41
RAPGEF1-204ENST00000414781 DISP1Q96F81 1524 aa23.83■■□□□ 1.41
RAPGEF1-204ENST00000414781 SUPT5HO00267 1087 aaKnown RBP23.81■■□□□ 1.4
RAPGEF1-204ENST00000414781 CD109Q6YHK3 1445 aa23.8■■□□□ 1.4
RAPGEF1-204ENST00000414781 PTPRMP28827 1452 aa23.78■■□□□ 1.4
RAPGEF1-204ENST00000414781 KIF21BO75037 1637 aa23.77■■□□□ 1.4
RAPGEF1-204ENST00000414781 CFAP43Q8NDM7 1665 aa23.75■■□□□ 1.39
RAPGEF1-204ENST00000414781 PCF11O94913 1555 aaKnown RBP23.73■■□□□ 1.39
RAPGEF1-204ENST00000414781 UGGT2Q9NYU1 1516 aa23.72■■□□□ 1.39
RAPGEF1-204ENST00000414781 SOCS7O14512 581 aa23.7■■□□□ 1.38
RAPGEF1-204ENST00000414781 ARAP3Q8WWN8 1544 aa23.69■■□□□ 1.38
RAPGEF1-204ENST00000414781 ADAMTSL3P82987 1691 aa23.69■■□□□ 1.38
RAPGEF1-204ENST00000414781 KIAA0556O60303 1618 aa23.66■■□□□ 1.38
RAPGEF1-204ENST00000414781 KCNH8Q96L42 1107 aa23.63■■□□□ 1.37
RAPGEF1-204ENST00000414781 PHLDB1Q86UU1 1377 aa23.62■■□□□ 1.37
RAPGEF1-204ENST00000414781 DISP3Q9P2K9 1392 aa23.6■■□□□ 1.37
RAPGEF1-204ENST00000414781 CERKQ8TCT0 537 aa23.58■■□□□ 1.37
RAPGEF1-204ENST00000414781 ILDR2Q71H61 639 aa23.56■■□□□ 1.36
RAPGEF1-204ENST00000414781 BCORL1Q5H9F3 1711 aa23.53■■□□□ 1.36
RAPGEF1-204ENST00000414781 RAPGEF2Q9Y4G8 1499 aa23.52■■□□□ 1.36
RAPGEF1-204ENST00000414781 MADDQ8WXG6 1647 aa23.51■■□□□ 1.35
RAPGEF1-204ENST00000414781 ABCA8O94911 1581 aa23.51■■□□□ 1.35
RAPGEF1-204ENST00000414781 ARID4BQ4LE39 1312 aaPredicted RBP23.5■■□□□ 1.35
RAPGEF1-204ENST00000414781 GOLGA3Q08378 1498 aa23.49■■□□□ 1.35
RAPGEF1-204ENST00000414781 NEO1Q92859 1461 aa23.45■■□□□ 1.34
RAPGEF1-204ENST00000414781 HSPA2P54652 639 aa23.45■■□□□ 1.34
RAPGEF1-204ENST00000414781 RAPGEF3O95398 923 aa23.44■■□□□ 1.34
RAPGEF1-204ENST00000414781 ABCA9Q8IUA7 1624 aa23.4■■□□□ 1.34
RAPGEF1-204ENST00000414781 RIMS1Q86UR5 1692 aaKnown RBP23.38■■□□□ 1.33
RAPGEF1-204ENST00000414781 FAM9AQ8IZU1 332 aaPredicted RBP23.37■■□□□ 1.33
RAPGEF1-204ENST00000414781 POGZQ7Z3K3 1410 aa23.36■■□□□ 1.33
RAPGEF1-204ENST00000414781 ARHGEF40Q8TER5 1519 aa23.36■■□□□ 1.33
RAPGEF1-204ENST00000414781 FRMPD1Q5SYB0 1578 aa23.35■■□□□ 1.33
RAPGEF1-204ENST00000414781 SPATA31D1Q6ZQQ2 1576 aa23.35■■□□□ 1.33
RAPGEF1-204ENST00000414781 FANCAO15360 1455 aa23.3■■□□□ 1.32
RAPGEF1-204ENST00000414781 ATP10BO94823 1461 aa23.3■■□□□ 1.32
RAPGEF1-204ENST00000414781 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
RAPGEF1-204ENST00000414781 DMRT2Q9Y5R5 561 aa23.27■■□□□ 1.32
RAPGEF1-204ENST00000414781 AKNAQ7Z591 1439 aa23.26■■□□□ 1.31
RAPGEF1-204ENST00000414781 DENND4BO75064 1496 aaPredicted RBP23.25■■□□□ 1.31
RAPGEF1-204ENST00000414781 ARID3CA6NKF2 412 aa23.24■■□□□ 1.31
RAPGEF1-204ENST00000414781 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
RAPGEF1-204ENST00000414781 FHOD3Q2V2M9 1422 aa23.23■■□□□ 1.31
RAPGEF1-204ENST00000414781 YEATS2Q9ULM3 1422 aa23.23■■□□□ 1.31
RAPGEF1-204ENST00000414781 TTC37Q6PGP7 1564 aa23.18■■□□□ 1.3
RAPGEF1-204ENST00000414781 ZMYM4Q5VZL5 1548 aa23.17■■□□□ 1.3
RAPGEF1-204ENST00000414781 EFCAB5A4FU69 1503 aa23.16■■□□□ 1.3
RAPGEF1-204ENST00000414781 MAGI2Q86UL8 1455 aa23.16■■□□□ 1.3
RAPGEF1-204ENST00000414781 RICTORQ6R327 1708 aa23.16■■□□□ 1.3
RAPGEF1-204ENST00000414781 ZFYVE16Q7Z3T8 1539 aa23.15■■□□□ 1.3
RAPGEF1-204ENST00000414781 PREX1Q8TCU6 1659 aa23.13■■□□□ 1.29
RAPGEF1-204ENST00000414781 CFAP74Q9C0B2 1584 aa23.12■■□□□ 1.29
RAPGEF1-204ENST00000414781 FER1L4A9Z1Z3 1794 aa23.1■■□□□ 1.29
RAPGEF1-204ENST00000414781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.1■■□□□ 1.29
RAPGEF1-204ENST00000414781 HNRNPUL2Q1KMD3 747 aaKnown RBP23.1■■□□□ 1.29
RAPGEF1-204ENST00000414781 MLECQ14165 292 aa23.09■■□□□ 1.29
RAPGEF1-204ENST00000414781 IQSEC2Q5JU85 1478 aa23.09■■□□□ 1.29
RAPGEF1-204ENST00000414781 ARHGEF12Q9NZN5 1544 aa23.07■■□□□ 1.28
RAPGEF1-204ENST00000414781 PTPRTO14522 1441 aa23.07■■□□□ 1.28
RAPGEF1-204ENST00000414781 RAPGEF6Q8TEU7 1601 aa23.06■■□□□ 1.28
RAPGEF1-204ENST00000414781 UHRF1BP1Q6BDS2 1440 aa23.05■■□□□ 1.28
RAPGEF1-204ENST00000414781 P3H3Q8IVL6 736 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms